RNA–Protein interactions for RNA: YLR011W

LOT6, Transcript of FMN-dependent NAD(P)H:quinone reductase, yeastyeast

Gene LOT6, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOT6YLR011W YGL015CP33199 130 aa8.89□□□□□ -0.99
LOT6YLR011W YRB30P53107 440 aaPredicted RBP8.89□□□□□ -0.99
LOT6YLR011W IML1P47170 1584 aa8.88□□□□□ -0.99
LOT6YLR011W CHZ1P40019 153 aaPredicted RBP8.88□□□□□ -0.99
LOT6YLR011W IOC4Q04213 475 aa8.88□□□□□ -0.99
LOT6YLR011W SUI2P20459 304 aaKnown RBP8.87□□□□□ -0.99
LOT6YLR011W NUP192P47054 1683 aa8.86□□□□□ -0.99
LOT6YLR011W DOP1Q03921 1698 aa8.86□□□□□ -0.99
LOT6YLR011W TRK1P12685 1235 aa8.86□□□□□ -0.99
LOT6YLR011W YAP3P38749 330 aa8.86□□□□□ -0.99
LOT6YLR011W FKH1P40466 484 aa8.86□□□□□ -0.99
LOT6YLR011W TAF8Q03750 510 aa8.86□□□□□ -0.99
LOT6YLR011W YEF3P16521 1044 aaKnown RBP8.84□□□□□ -0.99
LOT6YLR011W NUP188P52593 1655 aaKnown RBP8.84□□□□□ -0.99
LOT6YLR011W ABP1P15891 592 aaKnown RBP8.83□□□□□ -1
LOT6YLR011W EBP2P36049 427 aaKnown RBP8.83□□□□□ -1
LOT6YLR011W MPP10P47083 593 aaKnown RBP8.83□□□□□ -1
LOT6YLR011W YIR014WP40570 242 aa8.81□□□□□ -1
LOT6YLR011W ALD4P46367 519 aaKnown RBP8.81□□□□□ -1
LOT6YLR011W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
LOT6YLR011W TYS1P36421 394 aaKnown RBP8.8□□□□□ -1
LOT6YLR011W DNF2Q12675 1612 aa8.8□□□□□ -1
LOT6YLR011W RAD2P07276 1031 aa8.79□□□□□ -1
LOT6YLR011W MLP1Q02455 1875 aaKnown RBP8.79□□□□□ -1
LOT6YLR011W RAD9P14737 1309 aa8.79□□□□□ -1
LOT6YLR011W NAP1P25293 417 aaKnown RBP8.78□□□□□ -1
LOT6YLR011W RTR1P40084 226 aaPredicted RBP8.78□□□□□ -1
LOT6YLR011W IPL1P38991 367 aa8.77□□□□□ -1.01
LOT6YLR011W SNF7P39929 240 aaKnown RBP8.77□□□□□ -1.01
LOT6YLR011W SAP155P43612 1002 aa8.77□□□□□ -1.01
LOT6YLR011W REB1P21538 810 aa8.76□□□□□ -1.01
LOT6YLR011W TRM3Q07527 1436 aa8.76□□□□□ -1.01
LOT6YLR011W RPL17AP05740 184 aaKnown RBP8.75□□□□□ -1.01
LOT6YLR011W RPL17BP46990 184 aaKnown RBP8.75□□□□□ -1.01
LOT6YLR011W URN1Q06525 465 aaKnown RBP8.75□□□□□ -1.01
LOT6YLR011W BCK1Q01389 1478 aa8.75□□□□□ -1.01
LOT6YLR011W RRP46P53256 223 aaPredicted RBP8.74□□□□□ -1.01
LOT6YLR011W CAB1Q04430 367 aa8.74□□□□□ -1.01
LOT6YLR011W DAL5P15365 543 aa8.73□□□□□ -1.01
LOT6YLR011W TPD3P31383 635 aa8.73□□□□□ -1.01
LOT6YLR011W SNF2P22082 1703 aa8.72□□□□□ -1.01
LOT6YLR011W KAR2P16474 682 aaKnown RBP8.71□□□□□ -1.02
LOT6YLR011W AVT3P36062 692 aa8.71□□□□□ -1.02
LOT6YLR011W YIL092WP40497 633 aa8.71□□□□□ -1.02
LOT6YLR011W BUD27P43573 796 aaKnown RBP RIP-Chip data8.71□□□□□ -1.02not detected
LOT6YLR011W PCT1P13259 424 aa8.7□□□□□ -1.02
LOT6YLR011W ROX1P25042 368 aa8.7□□□□□ -1.02
LOT6YLR011W KRE5P22023 1365 aa8.7□□□□□ -1.02
LOT6YLR011W YML133CQ03099 1374 aa8.7□□□□□ -1.02
LOT6YLR011W YLL067CQ07888 1374 aa8.7□□□□□ -1.02
LOT6YLR011W YLL066CQ99208 1374 aa8.7□□□□□ -1.02
LOT6YLR011W POL32P47110 350 aa8.69□□□□□ -1.02
LOT6YLR011W THI22Q06490 572 aa8.69□□□□□ -1.02
LOT6YLR011W PRD1P25375 712 aa8.68□□□□□ -1.02
LOT6YLR011W DJP1P40564 432 aa8.68□□□□□ -1.02
LOT6YLR011W PAP2P53632 584 aaKnown RBP8.68□□□□□ -1.02
LOT6YLR011W CSE4P36012 229 aa8.67□□□□□ -1.02
LOT6YLR011W VPS24P36095 224 aaKnown RBP8.66□□□□□ -1.02
LOT6YLR011W HEF3P53978 1044 aaKnown RBP8.65□□□□□ -1.02
LOT6YLR011W MNN4P36044 1178 aa8.64□□□□□ -1.03
LOT6YLR011W PUF6Q04373 656 aaKnown RBP8.64□□□□□ -1.03
LOT6YLR011W HIM1Q06674 414 aa8.64□□□□□ -1.03
LOT6YLR011W MAK21Q12176 1025 aaKnown RBP8.64□□□□□ -1.03
LOT6YLR011W TAP42Q04372 366 aa8.63□□□□□ -1.03
LOT6YLR011W RTT109Q07794 436 aa8.63□□□□□ -1.03
LOT6YLR011W SLN1P39928 1220 aaPredicted RBP8.62□□□□□ -1.03
LOT6YLR011W RCM1P53972 490 aa8.62□□□□□ -1.03
LOT6YLR011W HAP1P0CE41 1502 aa8.62□□□□□ -1.03
LOT6YLR011W PDI1P17967 522 aaKnown RBP8.61□□□□□ -1.03
LOT6YLR011W MRX12P47084 519 aa8.61□□□□□ -1.03
LOT6YLR011W TCB2P48231 1178 aa8.61□□□□□ -1.03
LOT6YLR011W SIR4P11978 1358 aa8.61□□□□□ -1.03
LOT6YLR011W MSP1P28737 362 aa8.6□□□□□ -1.03
LOT6YLR011W PPH3P32345 308 aa8.6□□□□□ -1.03
LOT6YLR011W PSK1P31374 1356 aa8.6□□□□□ -1.03
LOT6YLR011W RTF1P53064 558 aa8.59□□□□□ -1.03
LOT6YLR011W RLF2Q12495 606 aa8.59□□□□□ -1.03
LOT6YLR011W LEU2P04173 364 aaPredicted RBP8.58□□□□□ -1.04
LOT6YLR011W GRX4P32642 244 aa8.58□□□□□ -1.04
LOT6YLR011W LSP1Q12230 341 aaKnown RBP8.58□□□□□ -1.04
LOT6YLR011W ARL1P38116 183 aaKnown RBP8.57□□□□□ -1.04
LOT6YLR011W YRF1-4O13559 1382 aa8.56□□□□□ -1.04
LOT6YLR011W AUS1Q08409 1394 aa8.56□□□□□ -1.04
LOT6YLR011W TRP5P00931 707 aaKnown RBP8.55□□□□□ -1.04
LOT6YLR011W RIA1P53893 1110 aa8.55□□□□□ -1.04
LOT6YLR011W DNF3Q12674 1656 aa8.54□□□□□ -1.04
LOT6YLR011W ITC1P53125 1264 aa8.54□□□□□ -1.04
LOT6YLR011W MTR4P47047 1073 aaKnown RBP8.53□□□□□ -1.04
LOT6YLR011W TEA1P47988 759 aa8.53□□□□□ -1.04
LOT6YLR011W ECM16Q04217 1267 aaKnown RBP8.53□□□□□ -1.04
LOT6YLR011W NOT3P06102 836 aaKnown RBP8.52□□□□□ -1.05
LOT6YLR011W ITT1Q04638 464 aa8.52□□□□□ -1.05
LOT6YLR011W EDE1P34216 1381 aa8.51□□□□□ -1.05
LOT6YLR011W KNS1P32350 737 aaPredicted RBP8.51□□□□□ -1.05
LOT6YLR011W CDC27P38042 758 aa8.51□□□□□ -1.05
LOT6YLR011W CPS1P27614 576 aa8.5□□□□□ -1.05
LOT6YLR011W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
LOT6YLR011W GYP7P48365 746 aa8.5□□□□□ -1.05
LOT6YLR011W GAS4Q08271 471 aa8.5□□□□□ -1.05
LOT6YLR011W RPO41P13433 1351 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms