RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeastyeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIF1YKR059W RAM2P29703 316 aa9.8□□□□□ -0.84
TIF1YKR059W YBL029C-AQ3E756 94 aa9.8□□□□□ -0.84
TIF1YKR059W CHC1P22137 1653 aaKnown RBP9.8□□□□□ -0.84
TIF1YKR059W MST1P07236 462 aa9.79□□□□□ -0.84
TIF1YKR059W DNF3Q12674 1656 aa9.75□□□□□ -0.85
TIF1YKR059W KIN1P13185 1064 aa9.74□□□□□ -0.85
TIF1YKR059W DSF2P38213 736 aa9.74□□□□□ -0.85
TIF1YKR059W YNR021WP53723 404 aaKnown RBP9.74□□□□□ -0.85
TIF1YKR059W PBS2P08018 668 aa9.73□□□□□ -0.85
TIF1YKR059W SEC7P11075 2009 aaKnown RBP9.71□□□□□ -0.86
TIF1YKR059W CAT8P39113 1433 aa9.69□□□□□ -0.86
TIF1YKR059W YAP5P40574 245 aa9.69□□□□□ -0.86
TIF1YKR059W TY3B-GQ99315 1547 aa9.66□□□□□ -0.86
TIF1YKR059W YAP3P38749 330 aa9.66□□□□□ -0.86
TIF1YKR059W NSR1P27476 414 aaKnown RBP RIP-Chip data9.65□□□□□ -0.86not detected
TIF1YKR059W MRM1P25270 412 aa9.64□□□□□ -0.87
TIF1YKR059W VNX1P42839 908 aa9.64□□□□□ -0.87
TIF1YKR059W AIM7Q12156 149 aa9.64□□□□□ -0.87
TIF1YKR059W WSC3Q12215 556 aa9.64□□□□□ -0.87
TIF1YKR059W MAK11P20484 414 aaKnown RBP9.63□□□□□ -0.87
TIF1YKR059W MAM3Q12296 706 aa9.63□□□□□ -0.87
TIF1YKR059W RTG3P38165 486 aa9.62□□□□□ -0.87
TIF1YKR059W SPP1Q03012 353 aa9.6□□□□□ -0.87
TIF1YKR059W AIM44Q99299 758 aa9.6□□□□□ -0.87
TIF1YKR059W YSP2Q06681 1438 aa9.59□□□□□ -0.87
TIF1YKR059W GLC3P32775 704 aa9.59□□□□□ -0.87
TIF1YKR059W HAP1P0CE41 1502 aa9.58□□□□□ -0.88
TIF1YKR059W MAK10Q02197 733 aa9.56□□□□□ -0.88
TIF1YKR059W YBT1P32386 1661 aa9.55□□□□□ -0.88
TIF1YKR059W RCR1P38212 213 aa9.55□□□□□ -0.88
TIF1YKR059W URN1Q06525 465 aaKnown RBP9.55□□□□□ -0.88
TIF1YKR059W BNR1P40450 1375 aa9.54□□□□□ -0.88
TIF1YKR059W PIB1Q06651 286 aa9.54□□□□□ -0.88
TIF1YKR059W MAK21Q12176 1025 aaKnown RBP9.54□□□□□ -0.88
TIF1YKR059W GEA1P47102 1408 aaPredicted RBP9.54□□□□□ -0.88
TIF1YKR059W GTT3P39996 337 aa9.53□□□□□ -0.88
TIF1YKR059W IES2P40154 320 aa9.53□□□□□ -0.88
TIF1YKR059W ATF2P53296 535 aa9.52□□□□□ -0.89
TIF1YKR059W REF2P42073 533 aaPredicted RBP9.51□□□□□ -0.89
TIF1YKR059W NOP53Q12080 455 aaKnown RBP9.49□□□□□ -0.89
TIF1YKR059W COQ8P27697 501 aa9.48□□□□□ -0.89
TIF1YKR059W GUA1P38625 525 aaKnown RBP9.47□□□□□ -0.89
TIF1YKR059W HPC2Q01448 625 aa9.45□□□□□ -0.9
TIF1YKR059W TY1B-NL2Q99337 1749 aaKnown RBP9.45□□□□□ -0.9
TIF1YKR059W DIT2P21595 489 aa9.43□□□□□ -0.9
TIF1YKR059W TIF11P38912 153 aaKnown RBP9.43□□□□□ -0.9
TIF1YKR059W BRL1P38770 471 aa9.42□□□□□ -0.9
TIF1YKR059W NUP42P49686 430 aaKnown RBP9.42□□□□□ -0.9
TIF1YKR059W YMR196WQ04336 1088 aa9.42□□□□□ -0.9
TIF1YKR059W USO1P25386 1790 aa9.41□□□□□ -0.9
TIF1YKR059W YML020WQ03722 664 aa9.4□□□□□ -0.9
TIF1YKR059W SSA1P10591 642 aaKnown RBP9.39□□□□□ -0.91
TIF1YKR059W SRB8P25648 1427 aa9.37□□□□□ -0.91
TIF1YKR059W COX6P00427 148 aa9.36□□□□□ -0.91
TIF1YKR059W IPL1P38991 367 aa9.36□□□□□ -0.91
TIF1YKR059W SLX8P40072 274 aa9.36□□□□□ -0.91
TIF1YKR059W IML1P47170 1584 aa9.36□□□□□ -0.91
TIF1YKR059W GEF1P37020 779 aa9.35□□□□□ -0.91
TIF1YKR059W YJL171CP46992 396 aa9.35□□□□□ -0.91
TIF1YKR059W TFB3Q03290 321 aa9.35□□□□□ -0.91
TIF1YKR059W NUP188P52593 1655 aaKnown RBP9.35□□□□□ -0.91
TIF1YKR059W ULI1P43604 169 aa9.34□□□□□ -0.91
TIF1YKR059W AIR2Q12476 344 aaKnown RBP9.34□□□□□ -0.91
TIF1YKR059W SSA2P10592 639 aaKnown RBP9.33□□□□□ -0.92
TIF1YKR059W LDB19Q12502 818 aa9.32□□□□□ -0.92
TIF1YKR059W VPS29P38759 282 aa9.3□□□□□ -0.92
TIF1YKR059W THI12P42883 340 aa9.3□□□□□ -0.92
TIF1YKR059W THI5P43534 340 aa9.3□□□□□ -0.92
TIF1YKR059W THI11P47183 340 aa9.3□□□□□ -0.92
TIF1YKR059W THI13Q07748 340 aa9.3□□□□□ -0.92
TIF1YKR059W VMR1P38735 1592 aa9.29□□□□□ -0.92
TIF1YKR059W YMR1P47147 688 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
TIF1YKR059W FKH1P40466 484 aa9.28□□□□□ -0.92
TIF1YKR059W DBP1P24784 617 aaKnown RBP9.27□□□□□ -0.93
TIF1YKR059W NOP8Q08287 484 aaPredicted RBP9.27□□□□□ -0.93
TIF1YKR059W IOC2Q12072 812 aa9.27□□□□□ -0.93
TIF1YKR059W SUB2Q07478 446 aaKnown RBP9.26□□□□□ -0.93
TIF1YKR059W SSA4P22202 642 aaKnown RBP9.24□□□□□ -0.93
TIF1YKR059W RPL34BP40525 121 aaKnown RBP9.24□□□□□ -0.93
TIF1YKR059W SET4P42948 560 aa9.24□□□□□ -0.93
TIF1YKR059W SLD2P34252 453 aa9.23□□□□□ -0.93
TIF1YKR059W NOP7P53261 605 aaKnown RBP9.23□□□□□ -0.93
TIF1YKR059W EDS1P38073 919 aa9.21□□□□□ -0.94
TIF1YKR059W KIC1P38692 1080 aa9.21□□□□□ -0.94
TIF1YKR059W YJL007CP47080 104 aa9.21□□□□□ -0.94
TIF1YKR059W CSN12P47130 423 aa9.21□□□□□ -0.94
TIF1YKR059W BUD21Q08492 214 aaPredicted RBP9.21□□□□□ -0.94
TIF1YKR059W TYS1P36421 394 aaKnown RBP9.2□□□□□ -0.94
TIF1YKR059W BIM1P40013 344 aa9.19□□□□□ -0.94
TIF1YKR059W YOL036WQ08206 761 aa9.19□□□□□ -0.94
TIF1YKR059W MSB4Q12317 492 aa9.19□□□□□ -0.94
TIF1YKR059W PKC1P24583 1151 aa9.18□□□□□ -0.94
TIF1YKR059W EAP1P36041 632 aaKnown RBP9.18□□□□□ -0.94
TIF1YKR059W STS1P38637 319 aa9.18□□□□□ -0.94
TIF1YKR059W PTC3P34221 468 aaKnown RBP9.17□□□□□ -0.94
TIF1YKR059W UBP14P38237 781 aaKnown RBP9.17□□□□□ -0.94
TIF1YKR059W BMT6Q12291 365 aa9.17□□□□□ -0.94
TIF1YKR059W TRP5P00931 707 aaKnown RBP9.16□□□□□ -0.94
TIF1YKR059W RPL34AP87262 121 aaPredicted RBP9.16□□□□□ -0.94
TIF1YKR059W VMA1P17255 1071 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms