RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W TY1A-DR4O74302 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-HP0C2I4 478 aaKnown RBP4.52□□□□□ -1.69
TRM2YKR056W TY1A-AP0CX57 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-PR1P0CX58 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-ORP0CX59 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-PR2P0CX60 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-DR5P0CX65 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-ER2P0CX66 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-GR3P0CX67 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-LR1P0CX68 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-MR2P0CX69 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-JR2P47099 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-DR1Q03856 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-ML1Q04706 440 aaKnown RBP4.52□□□□□ -1.69
TRM2YKR056W CSC1Q06538 782 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-BRQ12217 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-NL2Q12470 440 aa4.52□□□□□ -1.69
TRM2YKR056W TY1A-GR2Q12485 440 aa4.52□□□□□ -1.69
TRM2YKR056W SEC2P17065 759 aa4.52□□□□□ -1.69
TRM2YKR056W ASH1P34233 588 aa4.52□□□□□ -1.69
TRM2YKR056W KIC1P38692 1080 aa4.52□□□□□ -1.69
TRM2YKR056W RRN7P40992 514 aa4.52□□□□□ -1.69
TRM2YKR056W DMA2P53924 522 aa4.52□□□□□ -1.69
TRM2YKR056W PAT1P25644 796 aaKnown RBP4.51□□□□□ -1.69
TRM2YKR056W GAP1P19145 602 aaPredicted RBP4.5□□□□□ -1.69
TRM2YKR056W HST3P53687 447 aa4.5□□□□□ -1.69
TRM2YKR056W RRD1P40454 393 aaKnown RBP4.49□□□□□ -1.69
TRM2YKR056W AFT1P22149 690 aa4.48□□□□□ -1.69
TRM2YKR056W SET1P38827 1080 aaKnown RBP4.48□□□□□ -1.69
TRM2YKR056W MET32Q12041 191 aa4.48□□□□□ -1.69
TRM2YKR056W YDR090CQ03193 310 aa4.47□□□□□ -1.69
TRM2YKR056W RPN1P38764 993 aaKnown RBP4.44□□□□□ -1.7
TRM2YKR056W IFH1P39520 1085 aa4.44□□□□□ -1.7
TRM2YKR056W CAF120P53836 1060 aa4.43□□□□□ -1.7
TRM2YKR056W YJR115WP47152 169 aa4.42□□□□□ -1.7
TRM2YKR056W TRK2P28584 889 aa4.42□□□□□ -1.7
TRM2YKR056W ORC6P38826 435 aa4.39□□□□□ -1.71
TRM2YKR056W YPR148CQ06523 435 aa4.39□□□□□ -1.71
TRM2YKR056W ACO2P39533 789 aa4.38□□□□□ -1.71
TRM2YKR056W YGR035CP53222 116 aa4.38□□□□□ -1.71
TRM2YKR056W PUS5Q06244 254 aa4.38□□□□□ -1.71
TRM2YKR056W VPS70P47161 811 aa4.37□□□□□ -1.71
TRM2YKR056W MVP1P40959 511 aaKnown RBP4.36□□□□□ -1.71
TRM2YKR056W MOD5P07884 428 aa4.36□□□□□ -1.71
TRM2YKR056W YPR109WQ06104 294 aa4.36□□□□□ -1.71
TRM2YKR056W KEX2P13134 814 aa4.35□□□□□ -1.71
TRM2YKR056W RLF2Q12495 606 aa4.35□□□□□ -1.71
TRM2YKR056W PAC1P39946 494 aaKnown RBP4.34□□□□□ -1.71
TRM2YKR056W ERF2Q06551 359 aa4.34□□□□□ -1.71
TRM2YKR056W CKB1P43639 278 aa4.34□□□□□ -1.71
TRM2YKR056W YLR346CQ06139 101 aa4.33□□□□□ -1.72
TRM2YKR056W OPT2Q06593 877 aa4.33□□□□□ -1.72
TRM2YKR056W SPB4P25808 606 aaPredicted RBP4.32□□□□□ -1.72
TRM2YKR056W MSB3P48566 633 aaPredicted RBP4.32□□□□□ -1.72
TRM2YKR056W REF2P42073 533 aaPredicted RBP4.31□□□□□ -1.72
TRM2YKR056W HPF1Q05164 967 aa4.31□□□□□ -1.72
TRM2YKR056W RGR1P19263 1082 aa4.3□□□□□ -1.72
TRM2YKR056W SRF1Q12516 437 aa4.3□□□□□ -1.72
TRM2YKR056W UGA3P26370 528 aa4.29□□□□□ -1.72
TRM2YKR056W ICP55P40051 511 aa4.29□□□□□ -1.72
TRM2YKR056W YIR007WP40566 764 aa4.29□□□□□ -1.72
TRM2YKR056W LSB3P43603 459 aaKnown RBP4.29□□□□□ -1.72
TRM2YKR056W PTK2P47116 818 aaKnown RBP4.28□□□□□ -1.72
TRM2YKR056W PUS1Q12211 544 aaKnown RBP4.28□□□□□ -1.72
TRM2YKR056W DSF2P38213 736 aa4.27□□□□□ -1.73
TRM2YKR056W TUB4P53378 473 aa4.27□□□□□ -1.73
TRM2YKR056W GLY1P37303 387 aaKnown RBP4.27□□□□□ -1.73
TRM2YKR056W YPR204WQ08995 1032 aa4.27□□□□□ -1.73
TRM2YKR056W PBS2P08018 668 aa4.26□□□□□ -1.73
TRM2YKR056W SCW11P53189 542 aa4.26□□□□□ -1.73
TRM2YKR056W AGE1Q04412 482 aa4.26□□□□□ -1.73
TRM2YKR056W KIN1P13185 1064 aa4.25□□□□□ -1.73
TRM2YKR056W SYH1Q02875 849 aaKnown RBP4.25□□□□□ -1.73
TRM2YKR056W TYW1Q08960 810 aaKnown RBP4.24□□□□□ -1.73
TRM2YKR056W NRD1P53617 575 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
TRM2YKR056W COX6P00427 148 aa4.23□□□□□ -1.73
TRM2YKR056W MIP1P15801 1254 aa4.23□□□□□ -1.73
TRM2YKR056W NUP85P46673 744 aa4.23□□□□□ -1.73
TRM2YKR056W KXD1P53158 218 aa4.22□□□□□ -1.73
TRM2YKR056W MAK21Q12176 1025 aaKnown RBP4.22□□□□□ -1.73
TRM2YKR056W TY1A-BLQ12266 440 aa4.22□□□□□ -1.73
TRM2YKR056W NUP42P49686 430 aaKnown RBP4.21□□□□□ -1.74
TRM2YKR056W YNR021WP53723 404 aaKnown RBP4.21□□□□□ -1.74
TRM2YKR056W DIT2P21595 489 aa4.21□□□□□ -1.74
TRM2YKR056W GUA1P38625 525 aaKnown RBP4.2□□□□□ -1.74
TRM2YKR056W GLC3P32775 704 aa4.19□□□□□ -1.74
TRM2YKR056W PHM7Q12252 991 aa4.19□□□□□ -1.74
TRM2YKR056W TPD3P31383 635 aa4.19□□□□□ -1.74
TRM2YKR056W HXT10P43581 546 aa4.18□□□□□ -1.74
TRM2YKR056W RTF1P53064 558 aa4.18□□□□□ -1.74
TRM2YKR056W IES2P40154 320 aa4.17□□□□□ -1.74
TRM2YKR056W AIM7Q12156 149 aa4.17□□□□□ -1.74
TRM2YKR056W MAM3Q12296 706 aa4.17□□□□□ -1.74
TRM2YKR056W YNL115CP53925 644 aa4.17□□□□□ -1.74
TRM2YKR056W DPH6Q12429 685 aa4.17□□□□□ -1.74
TRM2YKR056W KIP2P28743 706 aa4.16□□□□□ -1.74
TRM2YKR056W MDJ1P35191 511 aa4.15□□□□□ -1.75
TRM2YKR056W UBP2Q01476 1272 aa4.15□□□□□ -1.75
TRM2YKR056W LSC2P53312 427 aa4.14□□□□□ -1.75
TRM2YKR056W PDC1P06169 563 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms