RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeastyeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EBP2YKL172W YDR344CQ05510 147 aa8.07□□□□□ -1.12
EBP2YKL172W PDR1P12383 1068 aa8.05□□□□□ -1.12
EBP2YKL172W MMP1Q12372 583 aa8.05□□□□□ -1.12
EBP2YKL172W YNL115CP53925 644 aa8.04□□□□□ -1.12
EBP2YKL172W YML082WQ04533 649 aaKnown RBP8.03□□□□□ -1.12
EBP2YKL172W RAM1P22007 431 aa8.01□□□□□ -1.13
EBP2YKL172W KTR1P27810 393 aaKnown RBP8.01□□□□□ -1.13
EBP2YKL172W TFB3Q03290 321 aa8.01□□□□□ -1.13
EBP2YKL172W TYW1Q08960 810 aaKnown RBP8.01□□□□□ -1.13
EBP2YKL172W STR2P47164 639 aa8□□□□□ -1.13
EBP2YKL172W KEX2P13134 814 aa7.99□□□□□ -1.13
EBP2YKL172W SLY41P22215 453 aa7.99□□□□□ -1.13
EBP2YKL172W ISM1P48526 1002 aa7.99□□□□□ -1.13
EBP2YKL172W PKH3Q03306 898 aaPredicted RBP7.98□□□□□ -1.13
EBP2YKL172W ESS1P22696 170 aa7.97□□□□□ -1.13
EBP2YKL172W SCJ1P25303 377 aa7.97□□□□□ -1.13
EBP2YKL172W GCD11P32481 527 aaKnown RBP7.96□□□□□ -1.14
EBP2YKL172W LAM6Q08001 693 aa7.95□□□□□ -1.14
EBP2YKL172W PRT1P06103 763 aaKnown RBP7.94□□□□□ -1.14
EBP2YKL172W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
EBP2YKL172W BUD20Q08004 166 aaPredicted RBP7.94□□□□□ -1.14
EBP2YKL172W RAD59Q12223 238 aa7.94□□□□□ -1.14
EBP2YKL172W YPR015CQ12531 247 aa7.94□□□□□ -1.14
EBP2YKL172W ARG8P18544 423 aa7.93□□□□□ -1.14
EBP2YKL172W TBF1Q02457 562 aa7.93□□□□□ -1.14
EBP2YKL172W PAT1P25644 796 aaKnown RBP7.92□□□□□ -1.14
EBP2YKL172W YJU3P28321 313 aa7.92□□□□□ -1.14
EBP2YKL172W PUS6P53294 404 aa7.92□□□□□ -1.14
EBP2YKL172W SAS4Q04003 481 aa7.92□□□□□ -1.14
EBP2YKL172W ERF2Q06551 359 aa7.92□□□□□ -1.14
EBP2YKL172W TY1A-DR4O74302 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-HP0C2I4 478 aaKnown RBP7.91□□□□□ -1.14
EBP2YKL172W TY1A-AP0CX57 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-PR1P0CX58 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-ORP0CX59 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-PR2P0CX60 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-DR5P0CX65 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-ER2P0CX66 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-GR3P0CX67 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-LR1P0CX68 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-MR2P0CX69 440 aa7.91□□□□□ -1.14
EBP2YKL172W CSE4P36012 229 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-JR2P47099 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-DR1Q03856 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-ML1Q04706 440 aaKnown RBP7.91□□□□□ -1.14
EBP2YKL172W TY1A-BRQ12217 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-NL2Q12470 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-GR2Q12485 440 aa7.91□□□□□ -1.14
EBP2YKL172W TRM1P15565 570 aaKnown RBP7.9□□□□□ -1.14
EBP2YKL172W GYP1Q08484 637 aa7.9□□□□□ -1.14
EBP2YKL172W SEC2P17065 759 aa7.89□□□□□ -1.15
EBP2YKL172W PKC1P24583 1151 aa7.89□□□□□ -1.15
EBP2YKL172W YBL036CP38197 257 aa7.89□□□□□ -1.15
EBP2YKL172W TUB4P53378 473 aa7.88□□□□□ -1.15
EBP2YKL172W RLF2Q12495 606 aa7.88□□□□□ -1.15
EBP2YKL172W VRP1P37370 817 aa7.87□□□□□ -1.15
EBP2YKL172W RSC30P38781 883 aa7.87□□□□□ -1.15
EBP2YKL172W AGE1Q04412 482 aa7.87□□□□□ -1.15
EBP2YKL172W SPT16P32558 1035 aaKnown RBP7.86□□□□□ -1.15
EBP2YKL172W RRN7P40992 514 aa7.86□□□□□ -1.15
EBP2YKL172W BCK2P33306 851 aa7.85□□□□□ -1.15
EBP2YKL172W SPT5P27692 1063 aaKnown RBP7.84□□□□□ -1.15
EBP2YKL172W MRF1P30775 413 aaPredicted RBP7.83□□□□□ -1.16
EBP2YKL172W YJL007CP47080 104 aa7.83□□□□□ -1.16
EBP2YKL172W RPA14P50106 137 aa7.83□□□□□ -1.16
EBP2YKL172W YDL206WQ12424 762 aa7.83□□□□□ -1.16
EBP2YKL172W MAK16P10962 306 aaPredicted RBP7.82□□□□□ -1.16
EBP2YKL172W ALR1Q08269 859 aa7.82□□□□□ -1.16
EBP2YKL172W RPL34BP40525 121 aaKnown RBP7.81□□□□□ -1.16
EBP2YKL172W KXD1P53158 218 aa7.81□□□□□ -1.16
EBP2YKL172W PAC1P39946 494 aaKnown RBP7.8□□□□□ -1.16
EBP2YKL172W BIM1P40013 344 aa7.8□□□□□ -1.16
EBP2YKL172W NAF1P53919 492 aaKnown RBP7.79□□□□□ -1.16
EBP2YKL172W YPR097WQ06839 1073 aa7.79□□□□□ -1.16
EBP2YKL172W BIO2P32451 375 aa7.78□□□□□ -1.16
EBP2YKL172W ERG12P07277 443 aa7.77□□□□□ -1.17
EBP2YKL172W PDC1P06169 563 aaKnown RBP7.76□□□□□ -1.17
EBP2YKL172W XDJ1P39102 459 aa7.76□□□□□ -1.17
EBP2YKL172W ATG32P40458 529 aa7.76□□□□□ -1.17
EBP2YKL172W TPD3P31383 635 aa7.75□□□□□ -1.17
EBP2YKL172W HXT10P43581 546 aa7.74□□□□□ -1.17
EBP2YKL172W YPP1P46951 817 aa7.74□□□□□ -1.17
EBP2YKL172W TIF1P10081 395 aaKnown RBP7.73□□□□□ -1.17
EBP2YKL172W YEL077CQ3E7X8 1277 aa7.73□□□□□ -1.17
EBP2YKL172W RRD1P40454 393 aaKnown RBP7.72□□□□□ -1.17
EBP2YKL172W YNL108CP53929 270 aa7.72□□□□□ -1.17
EBP2YKL172W MOD5P07884 428 aa7.71□□□□□ -1.18
EBP2YKL172W SUP45P12385 437 aaKnown RBP7.71□□□□□ -1.18
EBP2YKL172W TEC1P18412 486 aa7.69□□□□□ -1.18
EBP2YKL172W RTG2P32608 588 aaKnown RBP7.69□□□□□ -1.18
EBP2YKL172W YDJ1P25491 409 aaKnown RBP7.68□□□□□ -1.18
EBP2YKL172W SDH2P21801 266 aa7.67□□□□□ -1.18
EBP2YKL172W SIS2P36024 562 aa7.67□□□□□ -1.18
EBP2YKL172W MCM16Q12262 181 aa7.67□□□□□ -1.18
EBP2YKL172W ENO2P00925 437 aaKnown RBP7.66□□□□□ -1.18
EBP2YKL172W MRX12P47084 519 aa7.66□□□□□ -1.18
EBP2YKL172W VAC17P25591 423 aa7.65□□□□□ -1.18
EBP2YKL172W GUT2P32191 649 aa7.65□□□□□ -1.18
EBP2YKL172W FIG4P42837 879 aa7.65□□□□□ -1.18
EBP2YKL172W RIM21P48565 533 aa7.65□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms