RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeastyeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EBP2YKL172W YDR344CQ05510 147 aa8.07□□□□□ -1.12
EBP2YKL172W PDR1P12383 1068 aa8.05□□□□□ -1.12
EBP2YKL172W MMP1Q12372 583 aa8.05□□□□□ -1.12
EBP2YKL172W YNL115CP53925 644 aa8.04□□□□□ -1.12
EBP2YKL172W YML082WQ04533 649 aaKnown RBP8.03□□□□□ -1.12
EBP2YKL172W RAM1P22007 431 aa8.01□□□□□ -1.13
EBP2YKL172W KTR1P27810 393 aaKnown RBP8.01□□□□□ -1.13
EBP2YKL172W TFB3Q03290 321 aa8.01□□□□□ -1.13
EBP2YKL172W TYW1Q08960 810 aaKnown RBP8.01□□□□□ -1.13
EBP2YKL172W STR2P47164 639 aa8□□□□□ -1.13
EBP2YKL172W KEX2P13134 814 aa7.99□□□□□ -1.13
EBP2YKL172W SLY41P22215 453 aa7.99□□□□□ -1.13
EBP2YKL172W ISM1P48526 1002 aa7.99□□□□□ -1.13
EBP2YKL172W PKH3Q03306 898 aaPredicted RBP7.98□□□□□ -1.13
EBP2YKL172W ESS1P22696 170 aa7.97□□□□□ -1.13
EBP2YKL172W SCJ1P25303 377 aa7.97□□□□□ -1.13
EBP2YKL172W GCD11P32481 527 aaKnown RBP7.96□□□□□ -1.14
EBP2YKL172W LAM6Q08001 693 aa7.95□□□□□ -1.14
EBP2YKL172W PRT1P06103 763 aaKnown RBP7.94□□□□□ -1.14
EBP2YKL172W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
EBP2YKL172W BUD20Q08004 166 aaPredicted RBP7.94□□□□□ -1.14
EBP2YKL172W RAD59Q12223 238 aa7.94□□□□□ -1.14
EBP2YKL172W YPR015CQ12531 247 aa7.94□□□□□ -1.14
EBP2YKL172W ARG8P18544 423 aa7.93□□□□□ -1.14
EBP2YKL172W TBF1Q02457 562 aa7.93□□□□□ -1.14
EBP2YKL172W PAT1P25644 796 aaKnown RBP7.92□□□□□ -1.14
EBP2YKL172W YJU3P28321 313 aa7.92□□□□□ -1.14
EBP2YKL172W PUS6P53294 404 aa7.92□□□□□ -1.14
EBP2YKL172W SAS4Q04003 481 aa7.92□□□□□ -1.14
EBP2YKL172W ERF2Q06551 359 aa7.92□□□□□ -1.14
EBP2YKL172W TY1A-DR4O74302 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-HP0C2I4 478 aaKnown RBP7.91□□□□□ -1.14
EBP2YKL172W TY1A-AP0CX57 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-PR1P0CX58 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-ORP0CX59 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-PR2P0CX60 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-DR5P0CX65 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-ER2P0CX66 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-GR3P0CX67 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-LR1P0CX68 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-MR2P0CX69 440 aa7.91□□□□□ -1.14
EBP2YKL172W CSE4P36012 229 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-JR2P47099 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-DR1Q03856 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-ML1Q04706 440 aaKnown RBP7.91□□□□□ -1.14
EBP2YKL172W TY1A-BRQ12217 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-NL2Q12470 440 aa7.91□□□□□ -1.14
EBP2YKL172W TY1A-GR2Q12485 440 aa7.91□□□□□ -1.14
EBP2YKL172W TRM1P15565 570 aaKnown RBP7.9□□□□□ -1.14
EBP2YKL172W GYP1Q08484 637 aa7.9□□□□□ -1.14
EBP2YKL172W SEC2P17065 759 aa7.89□□□□□ -1.15
EBP2YKL172W PKC1P24583 1151 aa7.89□□□□□ -1.15
EBP2YKL172W YBL036CP38197 257 aa7.89□□□□□ -1.15
EBP2YKL172W TUB4P53378 473 aa7.88□□□□□ -1.15
EBP2YKL172W RLF2Q12495 606 aa7.88□□□□□ -1.15
EBP2YKL172W VRP1P37370 817 aa7.87□□□□□ -1.15
EBP2YKL172W RSC30P38781 883 aa7.87□□□□□ -1.15
EBP2YKL172W AGE1Q04412 482 aa7.87□□□□□ -1.15
EBP2YKL172W SPT16P32558 1035 aaKnown RBP7.86□□□□□ -1.15
EBP2YKL172W RRN7P40992 514 aa7.86□□□□□ -1.15
EBP2YKL172W BCK2P33306 851 aa7.85□□□□□ -1.15
EBP2YKL172W SPT5P27692 1063 aaKnown RBP7.84□□□□□ -1.15
EBP2YKL172W MRF1P30775 413 aaPredicted RBP7.83□□□□□ -1.16
EBP2YKL172W YJL007CP47080 104 aa7.83□□□□□ -1.16
EBP2YKL172W RPA14P50106 137 aa7.83□□□□□ -1.16
EBP2YKL172W YDL206WQ12424 762 aa7.83□□□□□ -1.16
EBP2YKL172W MAK16P10962 306 aaPredicted RBP7.82□□□□□ -1.16
EBP2YKL172W ALR1Q08269 859 aa7.82□□□□□ -1.16
EBP2YKL172W RPL34BP40525 121 aaKnown RBP7.81□□□□□ -1.16
EBP2YKL172W KXD1P53158 218 aa7.81□□□□□ -1.16
EBP2YKL172W PAC1P39946 494 aaKnown RBP7.8□□□□□ -1.16
EBP2YKL172W BIM1P40013 344 aa7.8□□□□□ -1.16
EBP2YKL172W NAF1P53919 492 aaKnown RBP7.79□□□□□ -1.16
EBP2YKL172W YPR097WQ06839 1073 aa7.79□□□□□ -1.16
EBP2YKL172W BIO2P32451 375 aa7.78□□□□□ -1.16
EBP2YKL172W ERG12P07277 443 aa7.77□□□□□ -1.17
EBP2YKL172W PDC1P06169 563 aaKnown RBP7.76□□□□□ -1.17
EBP2YKL172W XDJ1P39102 459 aa7.76□□□□□ -1.17
EBP2YKL172W ATG32P40458 529 aa7.76□□□□□ -1.17
EBP2YKL172W TPD3P31383 635 aa7.75□□□□□ -1.17
EBP2YKL172W HXT10P43581 546 aa7.74□□□□□ -1.17
EBP2YKL172W YPP1P46951 817 aa7.74□□□□□ -1.17
EBP2YKL172W TIF1P10081 395 aaKnown RBP7.73□□□□□ -1.17
EBP2YKL172W YEL077CQ3E7X8 1277 aa7.73□□□□□ -1.17
EBP2YKL172W RRD1P40454 393 aaKnown RBP7.72□□□□□ -1.17
EBP2YKL172W YNL108CP53929 270 aa7.72□□□□□ -1.17
EBP2YKL172W MOD5P07884 428 aa7.71□□□□□ -1.18
EBP2YKL172W SUP45P12385 437 aaKnown RBP7.71□□□□□ -1.18
EBP2YKL172W TEC1P18412 486 aa7.69□□□□□ -1.18
EBP2YKL172W RTG2P32608 588 aaKnown RBP7.69□□□□□ -1.18
EBP2YKL172W YDJ1P25491 409 aaKnown RBP7.68□□□□□ -1.18
EBP2YKL172W SDH2P21801 266 aa7.67□□□□□ -1.18
EBP2YKL172W SIS2P36024 562 aa7.67□□□□□ -1.18
EBP2YKL172W MCM16Q12262 181 aa7.67□□□□□ -1.18
EBP2YKL172W ENO2P00925 437 aaKnown RBP7.66□□□□□ -1.18
EBP2YKL172W MRX12P47084 519 aa7.66□□□□□ -1.18
EBP2YKL172W VAC17P25591 423 aa7.65□□□□□ -1.18
EBP2YKL172W GUT2P32191 649 aa7.65□□□□□ -1.18
EBP2YKL172W FIG4P42837 879 aa7.65□□□□□ -1.18
EBP2YKL172W RIM21P48565 533 aa7.65□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms