RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeastyeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH1YKL148C CAB1Q04430 367 aa15.36■□□□□ 0.05
SDH1YKL148C ITT1Q04638 464 aa15.36■□□□□ 0.05
SDH1YKL148C YEF3P16521 1044 aaKnown RBP15.35■□□□□ 0.05
SDH1YKL148C BNI1P41832 1953 aa15.34■□□□□ 0.05
SDH1YKL148C SNF2P22082 1703 aa15.33■□□□□ 0.04
SDH1YKL148C FPR3P38911 411 aaKnown RBP15.3■□□□□ 0.04
SDH1YKL148C RPC31P17890 251 aa15.29■□□□□ 0.04
SDH1YKL148C YRB30P53107 440 aaPredicted RBP15.29■□□□□ 0.04
SDH1YKL148C YML133CQ03099 1374 aa15.28■□□□□ 0.04
SDH1YKL148C YLL067CQ07888 1374 aa15.28■□□□□ 0.04
SDH1YKL148C YLL066CQ99208 1374 aa15.28■□□□□ 0.04
SDH1YKL148C SUI2P20459 304 aaKnown RBP15.27■□□□□ 0.04
SDH1YKL148C MPP10P47083 593 aaKnown RBP15.26■□□□□ 0.03
SDH1YKL148C HAP1P0CE41 1502 aa15.23■□□□□ 0.03
SDH1YKL148C RTR1P40084 226 aaPredicted RBP15.17■□□□□ 0.02
SDH1YKL148C MRX12P47084 519 aa15.17■□□□□ 0.02
SDH1YKL148C RRP46P53256 223 aaPredicted RBP15.17■□□□□ 0.02
SDH1YKL148C NAB6Q03735 1134 aaKnown RBP RIP-Chip data15.17■□□□□ 0.02not detected
SDH1YKL148C KRE5P22023 1365 aa15.16■□□□□ 0.02
SDH1YKL148C KAR2P16474 682 aaKnown RBP15.14■□□□□ 0.01
SDH1YKL148C PSK1P31374 1356 aa15.14■□□□□ 0.01
SDH1YKL148C RCM1P53972 490 aa15.13■□□□□ 0.01
SDH1YKL148C SAP155P43612 1002 aa15.12■□□□□ 0.01
SDH1YKL148C IME2P32581 645 aa15.11■□□□□ 0.01
SDH1YKL148C DNF3Q12674 1656 aa15.11■□□□□ 0.01
SDH1YKL148C PPH3P32345 308 aa15.09■□□□□ 0.01
SDH1YKL148C OPY1P38271 328 aa15.09■□□□□ 0.01
SDH1YKL148C TAP42Q04372 366 aa15.09■□□□□ 0.01
SDH1YKL148C RIA1P53893 1110 aa15.08■□□□□ 0
SDH1YKL148C RAD2P07276 1031 aa15.07■□□□□ 0
SDH1YKL148C YFR016CP43597 1233 aaKnown RBP15.07■□□□□ 0
SDH1YKL148C PDI1P17967 522 aaKnown RBP15.06■□□□□ 0
SDH1YKL148C PRD1P25375 712 aa15.05■□□□□ 0
SDH1YKL148C TPD3P31383 635 aa15.05■□□□□ 0
SDH1YKL148C PAP2P53632 584 aaKnown RBP15.05■□□□□ -0
SDH1YKL148C THI22Q06490 572 aa15.05■□□□□ -0
SDH1YKL148C HIM1Q06674 414 aa15.04■□□□□ -0
SDH1YKL148C ABP1P15891 592 aaKnown RBP15.03■□□□□ -0
SDH1YKL148C LEU2P04173 364 aaPredicted RBP15.02■□□□□ -0
SDH1YKL148C USO1P25386 1790 aa15.02□□□□□ -0.01
SDH1YKL148C AUS1Q08409 1394 aa15□□□□□ -0.01
SDH1YKL148C DAL5P15365 543 aa15□□□□□ -0.01
SDH1YKL148C YIL092WP40497 633 aa15□□□□□ -0.01
SDH1YKL148C BUD27P43573 796 aaKnown RBP RIP-Chip data15□□□□□ -0.01not detected
SDH1YKL148C HEF3P53978 1044 aaKnown RBP15□□□□□ -0.01
SDH1YKL148C RTF1P53064 558 aa14.99□□□□□ -0.01
SDH1YKL148C GRX4P32642 244 aa14.98□□□□□ -0.01
SDH1YKL148C YIR014WP40570 242 aa14.98□□□□□ -0.01
SDH1YKL148C CPS1P27614 576 aa14.97□□□□□ -0.01
SDH1YKL148C MTR4P47047 1073 aaKnown RBP14.97□□□□□ -0.01
SDH1YKL148C EAF7P53911 425 aaKnown RBP14.96□□□□□ -0.01
SDH1YKL148C CSE4P36012 229 aa14.96□□□□□ -0.02
SDH1YKL148C SIR4P11978 1358 aa14.94□□□□□ -0.02
SDH1YKL148C RTT109Q07794 436 aa14.94□□□□□ -0.02
SDH1YKL148C POL32P47110 350 aa14.94□□□□□ -0.02
SDH1YKL148C CLC1P17891 233 aa14.93□□□□□ -0.02
SDH1YKL148C TY1B-NL2Q99337 1749 aaKnown RBP14.93□□□□□ -0.02
SDH1YKL148C MAK21Q12176 1025 aaKnown RBP14.91□□□□□ -0.02
SDH1YKL148C YNR029CP53729 429 aaKnown RBP14.9□□□□□ -0.02
SDH1YKL148C MAK10Q02197 733 aa14.88□□□□□ -0.03
SDH1YKL148C RPO41P13433 1351 aaKnown RBP14.88□□□□□ -0.03
SDH1YKL148C YPR148CQ06523 435 aa14.86□□□□□ -0.03
SDH1YKL148C GAS4Q08271 471 aa14.86□□□□□ -0.03
SDH1YKL148C YRF1-4O13559 1382 aa14.86□□□□□ -0.03
SDH1YKL148C PUF6Q04373 656 aaKnown RBP14.85□□□□□ -0.03
SDH1YKL148C RPS24AP0CX31 135 aaKnown RBP14.84□□□□□ -0.03
SDH1YKL148C RPS24BP0CX32 135 aaKnown RBP14.84□□□□□ -0.03
SDH1YKL148C PRP43P53131 767 aaKnown RBP14.81□□□□□ -0.04
SDH1YKL148C APC1P53886 1748 aa14.8□□□□□ -0.04
SDH1YKL148C ADE6P38972 1358 aaKnown RBP14.8□□□□□ -0.04
SDH1YKL148C DPS1P04802 557 aaKnown RBP14.8□□□□□ -0.04
SDH1YKL148C SNF7P39929 240 aaKnown RBP14.8□□□□□ -0.04
SDH1YKL148C BUB1P41695 1021 aaKnown RBP RIP-Chip data14.8□□□□□ -0.04not detected
SDH1YKL148C PCT1P13259 424 aa14.79□□□□□ -0.04
SDH1YKL148C AKL1P38080 1108 aaKnown RBP14.78□□□□□ -0.04
SDH1YKL148C DSD1P53095 428 aa14.75□□□□□ -0.05
SDH1YKL148C TRP5P00931 707 aaKnown RBP14.74□□□□□ -0.05
SDH1YKL148C GYP7P48365 746 aa14.74□□□□□ -0.05
SDH1YKL148C YNL050CP53952 270 aa14.72□□□□□ -0.05
SDH1YKL148C ROX1P25042 368 aa14.72□□□□□ -0.05
SDH1YKL148C RRT14P40470 206 aa14.71□□□□□ -0.05
SDH1YKL148C TY4B-HP0C2J7 1802 aa14.71□□□□□ -0.05
SDH1YKL148C TY4B-JP47024 1803 aa14.71□□□□□ -0.05
SDH1YKL148C RRP5Q05022 1729 aaKnown RBP14.69□□□□□ -0.06
SDH1YKL148C YRF1-2P40105 1681 aa14.69□□□□□ -0.06
SDH1YKL148C DJP1P40564 432 aa14.68□□□□□ -0.06
SDH1YKL148C ZDS1P50111 915 aaKnown RBP14.68□□□□□ -0.06
SDH1YKL148C VPS24P36095 224 aaKnown RBP14.67□□□□□ -0.06
SDH1YKL148C MAM1P40065 302 aa14.67□□□□□ -0.06
SDH1YKL148C SRT1Q03175 343 aa14.66□□□□□ -0.06
SDH1YKL148C ECM16Q04217 1267 aaKnown RBP14.66□□□□□ -0.06
SDH1YKL148C YIL177CP40434 1758 aa14.66□□□□□ -0.06
SDH1YKL148C YJL225CP40889 1758 aa14.66□□□□□ -0.06
SDH1YKL148C NTH2P35172 780 aa14.66□□□□□ -0.06
SDH1YKL148C ILV3P39522 585 aaKnown RBP14.64□□□□□ -0.07
SDH1YKL148C YBR287WP38355 427 aa14.63□□□□□ -0.07
SDH1YKL148C RLF2Q12495 606 aa14.63□□□□□ -0.07
SDH1YKL148C EDE1P34216 1381 aa14.62□□□□□ -0.07
SDH1YKL148C YNG2P38806 282 aaKnown RBP14.61□□□□□ -0.07
SDH1YKL148C YPP1P46951 817 aa14.61□□□□□ -0.07
Retrieved 100 of 5,963 RNA–protein pairs in 90.2 ms