RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C TY1A-BRQ12217 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-NL2Q12470 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-GR2Q12485 440 aa9.19□□□□□ -0.94
CCE1YKL011C SEC2P17065 759 aa9.17□□□□□ -0.94
CCE1YKL011C CDC4P07834 779 aa9.15□□□□□ -0.94
CCE1YKL011C SPT16P32558 1035 aaKnown RBP9.14□□□□□ -0.95
CCE1YKL011C NPL4P33755 580 aa9.14□□□□□ -0.95
CCE1YKL011C FRK1Q03002 865 aaPredicted RBP9.14□□□□□ -0.95
CCE1YKL011C GCD11P32481 527 aaKnown RBP9.13□□□□□ -0.95
CCE1YKL011C MET22P32179 357 aa9.11□□□□□ -0.95
CCE1YKL011C ORC6P38826 435 aa9.11□□□□□ -0.95
CCE1YKL011C BDP1P46678 594 aa9.08□□□□□ -0.96
CCE1YKL011C ENV9Q08651 330 aa9.08□□□□□ -0.96
CCE1YKL011C RRN7P40992 514 aa9.05□□□□□ -0.96
CCE1YKL011C IFH1P39520 1085 aa9.04□□□□□ -0.96
CCE1YKL011C REF2P42073 533 aaPredicted RBP9.02□□□□□ -0.97
CCE1YKL011C HED1Q03937 162 aa9.02□□□□□ -0.97
CCE1YKL011C MVP1P40959 511 aaKnown RBP9□□□□□ -0.97
CCE1YKL011C YDR444WQ04093 687 aa8.98□□□□□ -0.97
CCE1YKL011C PAT1P25644 796 aaKnown RBP8.96□□□□□ -0.98
CCE1YKL011C YPR148CQ06523 435 aa8.96□□□□□ -0.98
CCE1YKL011C YPR109WQ06104 294 aa8.94□□□□□ -0.98
CCE1YKL011C YDL176WQ12027 708 aa8.94□□□□□ -0.98
CCE1YKL011C LCB5Q06147 687 aaKnown RBP8.92□□□□□ -0.98
CCE1YKL011C MET32Q12041 191 aa8.92□□□□□ -0.98
CCE1YKL011C RGR1P19263 1082 aa8.91□□□□□ -0.98
CCE1YKL011C COX6P00427 148 aa8.89□□□□□ -0.99
CCE1YKL011C ASH1P34233 588 aa8.89□□□□□ -0.99
CCE1YKL011C ERF2Q06551 359 aa8.89□□□□□ -0.99
CCE1YKL011C KEX2P13134 814 aa8.88□□□□□ -0.99
CCE1YKL011C AFT1P22149 690 aa8.87□□□□□ -0.99
CCE1YKL011C MAK21Q12176 1025 aaKnown RBP8.87□□□□□ -0.99
CCE1YKL011C MOD5P07884 428 aa8.86□□□□□ -0.99
CCE1YKL011C PAC1P39946 494 aaKnown RBP8.85□□□□□ -0.99
CCE1YKL011C RRD1P40454 393 aaKnown RBP8.81□□□□□ -1
CCE1YKL011C HST3P53687 447 aa8.81□□□□□ -1
CCE1YKL011C PUS5Q06244 254 aa8.79□□□□□ -1
CCE1YKL011C AGE1Q04412 482 aa8.78□□□□□ -1
CCE1YKL011C VPS70P47161 811 aa8.77□□□□□ -1.01
CCE1YKL011C YJR115WP47152 169 aa8.75□□□□□ -1.01
CCE1YKL011C TUB4P53378 473 aa8.73□□□□□ -1.01
CCE1YKL011C MSB3P48566 633 aaPredicted RBP8.64□□□□□ -1.03
CCE1YKL011C CAF120P53836 1060 aa8.64□□□□□ -1.03
CCE1YKL011C PSE1P32337 1089 aaKnown RBP8.63□□□□□ -1.03
CCE1YKL011C ACO2P39533 789 aa8.63□□□□□ -1.03
CCE1YKL011C RTF1P53064 558 aa8.63□□□□□ -1.03
CCE1YKL011C MTC5Q03897 1148 aa8.62□□□□□ -1.03
CCE1YKL011C CLB5P30283 435 aa8.6□□□□□ -1.03
CCE1YKL011C TPD3P31383 635 aa8.59□□□□□ -1.03
CCE1YKL011C YNL115CP53925 644 aa8.59□□□□□ -1.03
CCE1YKL011C KXD1P53158 218 aa8.56□□□□□ -1.04
CCE1YKL011C OPT2Q06593 877 aa8.56□□□□□ -1.04
CCE1YKL011C SYH1Q02875 849 aaKnown RBP8.55□□□□□ -1.04
CCE1YKL011C HXT10P43581 546 aa8.54□□□□□ -1.04
CCE1YKL011C SIT4P20604 311 aa8.53□□□□□ -1.04
CCE1YKL011C PTK2P47116 818 aaKnown RBP8.53□□□□□ -1.04
CCE1YKL011C TRK2P28584 889 aa8.52□□□□□ -1.05
CCE1YKL011C PDC1P06169 563 aaKnown RBP8.51□□□□□ -1.05
CCE1YKL011C UGA3P26370 528 aa8.51□□□□□ -1.05
CCE1YKL011C PBS2P08018 668 aa8.5□□□□□ -1.05
CCE1YKL011C YGR035CP53222 116 aa8.49□□□□□ -1.05
CCE1YKL011C YLR346CQ06139 101 aa8.49□□□□□ -1.05
CCE1YKL011C GLY1P37303 387 aaKnown RBP8.47□□□□□ -1.05
CCE1YKL011C SRF1Q12516 437 aa8.47□□□□□ -1.05
CCE1YKL011C YIR007WP40566 764 aa8.46□□□□□ -1.06
CCE1YKL011C HPF1Q05164 967 aa8.44□□□□□ -1.06
CCE1YKL011C NIS1P53939 407 aa8.43□□□□□ -1.06
CCE1YKL011C NUP85P46673 744 aa8.42□□□□□ -1.06
CCE1YKL011C CKB1P43639 278 aa8.41□□□□□ -1.06
CCE1YKL011C MRT4P33201 236 aaKnown RBP8.4□□□□□ -1.06
CCE1YKL011C TEA1P47988 759 aa8.4□□□□□ -1.06
CCE1YKL011C SCW11P53189 542 aa8.4□□□□□ -1.06
CCE1YKL011C TYW1Q08960 810 aaKnown RBP8.4□□□□□ -1.06
CCE1YKL011C TY1A-BLQ12266 440 aa8.4□□□□□ -1.06
CCE1YKL011C KIP2P28743 706 aa8.39□□□□□ -1.07
CCE1YKL011C MAM3Q12296 706 aa8.39□□□□□ -1.07
CCE1YKL011C MIP1P15801 1254 aa8.37□□□□□ -1.07
CCE1YKL011C SLY41P22215 453 aa8.35□□□□□ -1.07
CCE1YKL011C IXR1P33417 597 aa8.35□□□□□ -1.07
CCE1YKL011C RPA14P50106 137 aa8.35□□□□□ -1.07
CCE1YKL011C ALR1Q08269 859 aa8.35□□□□□ -1.07
CCE1YKL011C IES2P40154 320 aa8.34□□□□□ -1.07
CCE1YKL011C YPR097WQ06839 1073 aa8.34□□□□□ -1.07
CCE1YKL011C YDL206WQ12424 762 aa8.34□□□□□ -1.07
CCE1YKL011C RTT106P40161 455 aa8.33□□□□□ -1.08
CCE1YKL011C FPK1P53739 893 aa8.31□□□□□ -1.08
CCE1YKL011C NUP42P49686 430 aaKnown RBP8.29□□□□□ -1.08
CCE1YKL011C PUS6P53294 404 aa8.29□□□□□ -1.08
CCE1YKL011C TBF1Q02457 562 aa8.29□□□□□ -1.08
CCE1YKL011C DSF2P38213 736 aa8.28□□□□□ -1.08
CCE1YKL011C YPR204WQ08995 1032 aa8.28□□□□□ -1.08
CCE1YKL011C AAD14P42884 376 aa8.26□□□□□ -1.09
CCE1YKL011C LSC2P53312 427 aa8.26□□□□□ -1.09
CCE1YKL011C ICP55P40051 511 aa8.25□□□□□ -1.09
CCE1YKL011C YMR196WQ04336 1088 aa8.25□□□□□ -1.09
CCE1YKL011C UBP2Q01476 1272 aa8.24□□□□□ -1.09
CCE1YKL011C ARG82P07250 355 aa8.23□□□□□ -1.09
CCE1YKL011C TRM1P15565 570 aaKnown RBP8.23□□□□□ -1.09
CCE1YKL011C PUS1Q12211 544 aaKnown RBP8.22□□□□□ -1.09
CCE1YKL011C LSB3P43603 459 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms