RNA–Protein interactions for RNA: YJR065C

ARP3, Transcript of Essential component of the Arp2/3 complex, yeastyeast

Gene ARP3, Length 1,350 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP3YJR065C TY1B-MR1Q04214 1755 aa8.2□□□□□ -1.1
ARP3YJR065C TY1B-MR2Q04670 1755 aaKnown RBP8.2□□□□□ -1.1
ARP3YJR065C TY1B-LR1Q12088 1755 aaKnown RBP8.2□□□□□ -1.1
ARP3YJR065C TY1B-NL1Q12112 1755 aa8.2□□□□□ -1.1
ARP3YJR065C TY1B-GR1Q12141 1755 aa8.2□□□□□ -1.1
ARP3YJR065C TY1B-BLQ12490 1755 aa8.2□□□□□ -1.1
ARP3YJR065C RVB2Q12464 471 aaKnown RBP8.19□□□□□ -1.1
ARP3YJR065C VNX1P42839 908 aa8.18□□□□□ -1.1
ARP3YJR065C IQG1Q12280 1495 aa8.18□□□□□ -1.1
ARP3YJR065C SSP1P38871 571 aa8.17□□□□□ -1.1
ARP3YJR065C TY3B-IQ7LHG5 1498 aaKnown RBP8.17□□□□□ -1.1
ARP3YJR065C MMS1Q06211 1407 aa8.16□□□□□ -1.1
ARP3YJR065C NST1P53935 1240 aa8.16□□□□□ -1.1
ARP3YJR065C CDC25P04821 1589 aa8.16□□□□□ -1.1
ARP3YJR065C TAF5P38129 798 aa8.15□□□□□ -1.1
ARP3YJR065C QCR6P00127 147 aa8.14□□□□□ -1.11
ARP3YJR065C ABP1P15891 592 aaKnown RBP8.14□□□□□ -1.11
ARP3YJR065C YIR014WP40570 242 aa8.14□□□□□ -1.11
ARP3YJR065C YRB30P53107 440 aaPredicted RBP8.14□□□□□ -1.11
ARP3YJR065C WSC3Q12215 556 aa8.14□□□□□ -1.11
ARP3YJR065C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
ARP3YJR065C ROX1P25042 368 aa8.13□□□□□ -1.11
ARP3YJR065C KIP3P53086 805 aaKnown RBP8.13□□□□□ -1.11
ARP3YJR065C NTE1Q04958 1679 aa8.13□□□□□ -1.11
ARP3YJR065C MRM1P25270 412 aa8.12□□□□□ -1.11
ARP3YJR065C SIS2P36024 562 aa8.12□□□□□ -1.11
ARP3YJR065C YDL144CQ07589 356 aa8.12□□□□□ -1.11
ARP3YJR065C AIM44Q99299 758 aa8.12□□□□□ -1.11
ARP3YJR065C RPO21P04050 1733 aaKnown RBP8.11□□□□□ -1.11
ARP3YJR065C SPP1Q03012 353 aa8.11□□□□□ -1.11
ARP3YJR065C GTT3P39996 337 aa8.1□□□□□ -1.11
ARP3YJR065C BUD3P25558 1636 aa8.09□□□□□ -1.11
ARP3YJR065C YOR093CQ12275 1648 aa8.09□□□□□ -1.11
ARP3YJR065C PDR12Q02785 1511 aa8.09□□□□□ -1.12
ARP3YJR065C ESL2P36168 1195 aa8.09□□□□□ -1.12
ARP3YJR065C DJP1P40564 432 aa8.09□□□□□ -1.12
ARP3YJR065C PCT1P13259 424 aa8.08□□□□□ -1.12
ARP3YJR065C VPS24P36095 224 aaKnown RBP8.08□□□□□ -1.12
ARP3YJR065C LTE1P07866 1435 aa8.07□□□□□ -1.12
ARP3YJR065C SLN1P39928 1220 aaPredicted RBP8.06□□□□□ -1.12
ARP3YJR065C PIB1Q06651 286 aa8.06□□□□□ -1.12
ARP3YJR065C RTC1Q08281 1341 aa8.06□□□□□ -1.12
ARP3YJR065C NUP157P40064 1391 aaKnown RBP8.06□□□□□ -1.12
ARP3YJR065C RAD2P07276 1031 aa8.05□□□□□ -1.12
ARP3YJR065C RAV1P47104 1357 aa8.05□□□□□ -1.12
ARP3YJR065C SUI2P20459 304 aaKnown RBP8.04□□□□□ -1.12
ARP3YJR065C MET10P39692 1035 aa8.04□□□□□ -1.12
ARP3YJR065C MLP1Q02455 1875 aaKnown RBP8.04□□□□□ -1.12
ARP3YJR065C DNF2Q12675 1612 aa8.03□□□□□ -1.12
ARP3YJR065C TIF11P38912 153 aaKnown RBP8.02□□□□□ -1.13
ARP3YJR065C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
ARP3YJR065C SPO14P36126 1683 aa8.01□□□□□ -1.13
ARP3YJR065C YSP2Q06681 1438 aa8.01□□□□□ -1.13
ARP3YJR065C SNF2P22082 1703 aa8.01□□□□□ -1.13
ARP3YJR065C MSP1P28737 362 aa8□□□□□ -1.13
ARP3YJR065C ARL1P38116 183 aaKnown RBP8□□□□□ -1.13
ARP3YJR065C RTG3P38165 486 aa8□□□□□ -1.13
ARP3YJR065C MPP10P47083 593 aaKnown RBP8□□□□□ -1.13
ARP3YJR065C IOC4Q04213 475 aa8□□□□□ -1.13
ARP3YJR065C CST9Q06032 482 aa8□□□□□ -1.13
ARP3YJR065C DRS2P39524 1355 aa8□□□□□ -1.13
ARP3YJR065C NOT3P06102 836 aaKnown RBP7.99□□□□□ -1.13
ARP3YJR065C SPE2P21182 396 aa7.99□□□□□ -1.13
ARP3YJR065C NOP58Q12499 511 aaKnown RBP7.99□□□□□ -1.13
ARP3YJR065C RPA190P10964 1664 aaKnown RBP7.99□□□□□ -1.13
ARP3YJR065C CHC1P22137 1653 aaKnown RBP7.99□□□□□ -1.13
ARP3YJR065C EDE1P34216 1381 aa7.99□□□□□ -1.13
ARP3YJR065C MGA2P40578 1113 aa7.98□□□□□ -1.13
ARP3YJR065C BUD27P43573 796 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
ARP3YJR065C DOP1Q03921 1698 aa7.98□□□□□ -1.13
ARP3YJR065C YPP1P46951 817 aa7.97□□□□□ -1.13
ARP3YJR065C CTR9P89105 1077 aa7.97□□□□□ -1.13
ARP3YJR065C LSP1Q12230 341 aaKnown RBP7.97□□□□□ -1.13
ARP3YJR065C BNR1P40450 1375 aa7.96□□□□□ -1.13
ARP3YJR065C TRK1P12685 1235 aa7.95□□□□□ -1.14
ARP3YJR065C DAL5P15365 543 aa7.95□□□□□ -1.14
ARP3YJR065C RTR1P40084 226 aaPredicted RBP7.95□□□□□ -1.14
ARP3YJR065C COG8Q04632 607 aa7.95□□□□□ -1.14
ARP3YJR065C RLF2Q12495 606 aa7.95□□□□□ -1.14
ARP3YJR065C YMR1P47147 688 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
ARP3YJR065C VPS29P38759 282 aa7.93□□□□□ -1.14
ARP3YJR065C CHZ1P40019 153 aaPredicted RBP7.93□□□□□ -1.14
ARP3YJR065C ULI1P43604 169 aa7.93□□□□□ -1.14
ARP3YJR065C ITC1P53125 1264 aa7.93□□□□□ -1.14
ARP3YJR065C TRM3Q07527 1436 aa7.92□□□□□ -1.14
ARP3YJR065C SAP155P43612 1002 aa7.92□□□□□ -1.14
ARP3YJR065C POL32P47110 350 aa7.92□□□□□ -1.14
ARP3YJR065C AIR2Q12476 344 aaKnown RBP7.92□□□□□ -1.14
ARP3YJR065C VMR1P38735 1592 aa7.91□□□□□ -1.14
ARP3YJR065C DBP1P24784 617 aaKnown RBP7.91□□□□□ -1.14
ARP3YJR065C FKH1P40466 484 aa7.91□□□□□ -1.14
ARP3YJR065C PDR11P40550 1411 aa7.91□□□□□ -1.14
ARP3YJR065C TPD3P31383 635 aa7.9□□□□□ -1.14
ARP3YJR065C YIL092WP40497 633 aa7.9□□□□□ -1.14
ARP3YJR065C TEA1P47988 759 aa7.9□□□□□ -1.14
ARP3YJR065C ESC2Q06340 456 aa7.9□□□□□ -1.14
ARP3YJR065C LDB19Q12502 818 aa7.9□□□□□ -1.14
ARP3YJR065C YEF3P16521 1044 aaKnown RBP7.89□□□□□ -1.15
ARP3YJR065C NAP1P25293 417 aaKnown RBP7.89□□□□□ -1.15
ARP3YJR065C KNS1P32350 737 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms