RNA–Protein interactions for RNA: YJL100W

LSB6, Transcript of Type II phosphatidylinositol 4-kinase, yeastyeast

Gene LSB6, Length 1,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB6YJL100W KRE5P22023 1365 aa11.54□□□□□ -0.56
LSB6YJL100W MLP1Q02455 1875 aaKnown RBP11.52□□□□□ -0.57
LSB6YJL100W TY1B-NL2Q99337 1749 aaKnown RBP11.51□□□□□ -0.57
LSB6YJL100W RVB2Q12464 471 aaKnown RBP11.51□□□□□ -0.57
LSB6YJL100W USO1P25386 1790 aa11.5□□□□□ -0.57
LSB6YJL100W TAF8Q03750 510 aa11.49□□□□□ -0.57
LSB6YJL100W CDC45Q08032 650 aa11.49□□□□□ -0.57
LSB6YJL100W SCT1P32784 759 aa11.48□□□□□ -0.57
LSB6YJL100W VPS27P40343 622 aaKnown RBP11.48□□□□□ -0.57
LSB6YJL100W TRK1P12685 1235 aa11.47□□□□□ -0.57
LSB6YJL100W RPC31P17890 251 aa11.46□□□□□ -0.58
LSB6YJL100W YEF3P16521 1044 aaKnown RBP11.45□□□□□ -0.58
LSB6YJL100W THI12P42883 340 aa11.45□□□□□ -0.58
LSB6YJL100W THI5P43534 340 aa11.45□□□□□ -0.58
LSB6YJL100W THI11P47183 340 aa11.45□□□□□ -0.58
LSB6YJL100W YDL144CQ07589 356 aa11.45□□□□□ -0.58
LSB6YJL100W THI13Q07748 340 aa11.45□□□□□ -0.58
LSB6YJL100W RPP0P05317 312 aaKnown RBP11.44□□□□□ -0.58
LSB6YJL100W CHZ1P40019 153 aaPredicted RBP11.44□□□□□ -0.58
LSB6YJL100W YNR029CP53729 429 aaKnown RBP11.44□□□□□ -0.58
LSB6YJL100W FKH1P40466 484 aa11.42□□□□□ -0.58
LSB6YJL100W SUI2P20459 304 aaKnown RBP11.41□□□□□ -0.58
LSB6YJL100W SNF2P22082 1703 aa11.4□□□□□ -0.58
LSB6YJL100W MPP10P47083 593 aaKnown RBP11.38□□□□□ -0.59
LSB6YJL100W IME2P32581 645 aa11.37□□□□□ -0.59
LSB6YJL100W YML133CQ03099 1374 aa11.37□□□□□ -0.59
LSB6YJL100W YLL067CQ07888 1374 aa11.37□□□□□ -0.59
LSB6YJL100W YLL066CQ99208 1374 aa11.37□□□□□ -0.59
LSB6YJL100W OPY1P38271 328 aa11.36□□□□□ -0.59
LSB6YJL100W YFR016CP43597 1233 aaKnown RBP11.35□□□□□ -0.59
LSB6YJL100W FPR3P38911 411 aaKnown RBP11.35□□□□□ -0.59
LSB6YJL100W RCM1P53972 490 aa11.34□□□□□ -0.59
LSB6YJL100W RRP46P53256 223 aaPredicted RBP11.32□□□□□ -0.6
LSB6YJL100W YPR148CQ06523 435 aa11.32□□□□□ -0.6
LSB6YJL100W CPS1P27614 576 aa11.3□□□□□ -0.6
LSB6YJL100W IOC4Q04213 475 aa11.3□□□□□ -0.6
LSB6YJL100W PPH3P32345 308 aa11.28□□□□□ -0.6
LSB6YJL100W RTR1P40084 226 aaPredicted RBP11.27□□□□□ -0.61
LSB6YJL100W SAP155P43612 1002 aa11.26□□□□□ -0.61
LSB6YJL100W YRB30P53107 440 aaPredicted RBP11.26□□□□□ -0.61
LSB6YJL100W NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.25□□□□□ -0.61not detected
LSB6YJL100W PSK1P31374 1356 aa11.25□□□□□ -0.61
LSB6YJL100W TPD3P31383 635 aa11.22□□□□□ -0.61
LSB6YJL100W LEU2P04173 364 aaPredicted RBP11.21□□□□□ -0.61
LSB6YJL100W CLC1P17891 233 aa11.21□□□□□ -0.61
LSB6YJL100W DAL5P15365 543 aa11.21□□□□□ -0.62
LSB6YJL100W THI22Q06490 572 aa11.21□□□□□ -0.62
LSB6YJL100W KAR2P16474 682 aaKnown RBP11.19□□□□□ -0.62
LSB6YJL100W HIM1Q06674 414 aa11.19□□□□□ -0.62
LSB6YJL100W RAD2P07276 1031 aa11.19□□□□□ -0.62
LSB6YJL100W PTP3P40048 928 aa11.19□□□□□ -0.62
LSB6YJL100W YIL092WP40497 633 aa11.18□□□□□ -0.62
LSB6YJL100W MTR4P47047 1073 aaKnown RBP11.18□□□□□ -0.62
LSB6YJL100W EAF7P53911 425 aaKnown RBP11.18□□□□□ -0.62
LSB6YJL100W PRD1P25375 712 aa11.16□□□□□ -0.62
LSB6YJL100W CSE4P36012 229 aa11.16□□□□□ -0.62
LSB6YJL100W YIR014WP40570 242 aa11.16□□□□□ -0.62
LSB6YJL100W HEF3P53978 1044 aaKnown RBP11.16□□□□□ -0.62
LSB6YJL100W PAP2P53632 584 aaKnown RBP11.15□□□□□ -0.62
LSB6YJL100W POL32P47110 350 aa11.14□□□□□ -0.63
LSB6YJL100W AUS1Q08409 1394 aa11.14□□□□□ -0.63
LSB6YJL100W RTT109Q07794 436 aa11.14□□□□□ -0.63
LSB6YJL100W ADE6P38972 1358 aaKnown RBP11.12□□□□□ -0.63
LSB6YJL100W PRP45P28004 379 aaPredicted RBP11.12□□□□□ -0.63
LSB6YJL100W PRP43P53131 767 aaKnown RBP11.11□□□□□ -0.63
LSB6YJL100W RPS24AP0CX31 135 aaKnown RBP11.1□□□□□ -0.63
LSB6YJL100W RPS24BP0CX32 135 aaKnown RBP11.1□□□□□ -0.63
LSB6YJL100W TAP42Q04372 366 aa11.1□□□□□ -0.63
LSB6YJL100W PDI1P17967 522 aaKnown RBP11.09□□□□□ -0.63
LSB6YJL100W RTF1P53064 558 aa11.09□□□□□ -0.63
LSB6YJL100W YAH1Q12184 172 aaKnown RBP11.09□□□□□ -0.63
LSB6YJL100W PCT1P13259 424 aa11.08□□□□□ -0.64
LSB6YJL100W PRP5P21372 849 aaPredicted RBP11.08□□□□□ -0.64
LSB6YJL100W SNF7P39929 240 aaKnown RBP11.08□□□□□ -0.64
LSB6YJL100W DJP1P40564 432 aa11.07□□□□□ -0.64
LSB6YJL100W BUD27P43573 796 aaKnown RBP RIP-Chip data11.07□□□□□ -0.64not detected
LSB6YJL100W PUF6Q04373 656 aaKnown RBP11.07□□□□□ -0.64
LSB6YJL100W ENT1Q12518 454 aa11.05□□□□□ -0.64
LSB6YJL100W SIR4P11978 1358 aa11.05□□□□□ -0.64
LSB6YJL100W REB1P21538 810 aa11.04□□□□□ -0.64
LSB6YJL100W GRX4P32642 244 aa11.04□□□□□ -0.64
LSB6YJL100W APP1P53933 587 aa11.04□□□□□ -0.64
LSB6YJL100W ROX1P25042 368 aa11.03□□□□□ -0.64
LSB6YJL100W GAS4Q08271 471 aa11.02□□□□□ -0.64
LSB6YJL100W TY4B-HP0C2J7 1802 aa11.01□□□□□ -0.65
LSB6YJL100W TY4B-JP47024 1803 aa11.01□□□□□ -0.65
LSB6YJL100W DPS1P04802 557 aaKnown RBP11.01□□□□□ -0.65
LSB6YJL100W CAB3P36076 571 aa11□□□□□ -0.65
LSB6YJL100W MAK21Q12176 1025 aaKnown RBP11□□□□□ -0.65
LSB6YJL100W ILV3P39522 585 aaKnown RBP11□□□□□ -0.65
LSB6YJL100W BUB1P41695 1021 aaKnown RBP RIP-Chip data11□□□□□ -0.65not detected
LSB6YJL100W MSB3P48566 633 aaPredicted RBP11□□□□□ -0.65
LSB6YJL100W ENV9Q08651 330 aa11□□□□□ -0.65
LSB6YJL100W TRP5P00931 707 aaKnown RBP10.99□□□□□ -0.65
LSB6YJL100W RRP5Q05022 1729 aaKnown RBP10.99□□□□□ -0.65
LSB6YJL100W SLM3Q12093 417 aa10.98□□□□□ -0.65
LSB6YJL100W TCB1Q12466 1186 aa10.98□□□□□ -0.65
LSB6YJL100W RLF2Q12495 606 aa10.98□□□□□ -0.65
LSB6YJL100W RPO41P13433 1351 aaKnown RBP10.97□□□□□ -0.65
LSB6YJL100W SLN1P39928 1220 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms