RNA–Protein interactions for RNA: YJL054W

TIM54, Transcript of Component of the mitochondrial TIM22 complex, yeastyeast

Gene TIM54, Length 1,437 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM54YJL054W PIB1Q06651 286 aa8.36□□□□□ -1.07
TIM54YJL054W WSC3Q12215 556 aa8.36□□□□□ -1.07
TIM54YJL054W CAT8P39113 1433 aa8.33□□□□□ -1.08
TIM54YJL054W DBP1P24784 617 aaKnown RBP8.32□□□□□ -1.08
TIM54YJL054W ARO1P08566 1588 aaKnown RBP8.32□□□□□ -1.08
TIM54YJL054W GEA1P47102 1408 aaPredicted RBP8.31□□□□□ -1.08
TIM54YJL054W YOR093CQ12275 1648 aa8.3□□□□□ -1.08
TIM54YJL054W FKH1P40466 484 aa8.3□□□□□ -1.08
TIM54YJL054W NSR1P27476 414 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
TIM54YJL054W STS1P38637 319 aa8.28□□□□□ -1.08
TIM54YJL054W SEC7P11075 2009 aaKnown RBP8.28□□□□□ -1.08
TIM54YJL054W YAP3P38749 330 aa8.27□□□□□ -1.09
TIM54YJL054W CKB1P43639 278 aa8.27□□□□□ -1.09
TIM54YJL054W YSP2Q06681 1438 aa8.26□□□□□ -1.09
TIM54YJL054W CHC1P22137 1653 aaKnown RBP8.26□□□□□ -1.09
TIM54YJL054W MAK11P20484 414 aaKnown RBP8.26□□□□□ -1.09
TIM54YJL054W TY3B-GQ99315 1547 aa8.24□□□□□ -1.09
TIM54YJL054W BNR1P40450 1375 aa8.24□□□□□ -1.09
TIM54YJL054W TIF11P38912 153 aaKnown RBP8.22□□□□□ -1.09
TIM54YJL054W YBT1P32386 1661 aa8.21□□□□□ -1.09
TIM54YJL054W GTT3P39996 337 aa8.21□□□□□ -1.09
TIM54YJL054W SET1P38827 1080 aaKnown RBP8.2□□□□□ -1.1
TIM54YJL054W URN1Q06525 465 aaKnown RBP8.2□□□□□ -1.1
TIM54YJL054W DNF3Q12674 1656 aa8.18□□□□□ -1.1
TIM54YJL054W COQ8P27697 501 aa8.17□□□□□ -1.1
TIM54YJL054W MAK10Q02197 733 aa8.17□□□□□ -1.1
TIM54YJL054W BMT6Q12291 365 aa8.14□□□□□ -1.11
TIM54YJL054W VMA1P17255 1071 aaKnown RBP8.13□□□□□ -1.11
TIM54YJL054W SRB8P25648 1427 aa8.13□□□□□ -1.11
TIM54YJL054W LDB19Q12502 818 aa8.12□□□□□ -1.11
TIM54YJL054W EDS1P38073 919 aa8.11□□□□□ -1.11
TIM54YJL054W IPL1P38991 367 aa8.09□□□□□ -1.11
TIM54YJL054W BUD21Q08492 214 aaPredicted RBP8.09□□□□□ -1.11
TIM54YJL054W ULI1P43604 169 aa8.08□□□□□ -1.12
TIM54YJL054W PTC3P34221 468 aaKnown RBP8.06□□□□□ -1.12
TIM54YJL054W IOC2Q12072 812 aa8.05□□□□□ -1.12
TIM54YJL054W SET4P42948 560 aa8.03□□□□□ -1.12
TIM54YJL054W VPS70P47161 811 aa8.03□□□□□ -1.12
TIM54YJL054W HAP1P0CE41 1502 aa8.03□□□□□ -1.12
TIM54YJL054W YMR196WQ04336 1088 aa8.02□□□□□ -1.13
TIM54YJL054W GYP5Q12344 894 aa8.02□□□□□ -1.13
TIM54YJL054W TYS1P36421 394 aaKnown RBP8.01□□□□□ -1.13
TIM54YJL054W ATH1P48016 1211 aa8.01□□□□□ -1.13
TIM54YJL054W YOL036WQ08206 761 aa8.01□□□□□ -1.13
TIM54YJL054W SAM3Q08986 587 aa8.01□□□□□ -1.13
TIM54YJL054W GRE2Q12068 342 aaKnown RBP8.01□□□□□ -1.13
TIM54YJL054W NOP53Q12080 455 aaKnown RBP8.01□□□□□ -1.13
TIM54YJL054W NUP188P52593 1655 aaKnown RBP7.98□□□□□ -1.13
TIM54YJL054W DCW1P36091 449 aa7.97□□□□□ -1.13
TIM54YJL054W THI12P42883 340 aa7.96□□□□□ -1.13
TIM54YJL054W THI5P43534 340 aa7.96□□□□□ -1.13
TIM54YJL054W THI11P47183 340 aa7.96□□□□□ -1.13
TIM54YJL054W THI13Q07748 340 aa7.96□□□□□ -1.13
TIM54YJL054W USO1P25386 1790 aa7.96□□□□□ -1.13
TIM54YJL054W RGA2Q06407 1009 aa7.95□□□□□ -1.14
TIM54YJL054W YPR148CQ06523 435 aa7.95□□□□□ -1.14
TIM54YJL054W IML1P47170 1584 aa7.95□□□□□ -1.14
TIM54YJL054W IKI3Q06706 1349 aaKnown RBP7.95□□□□□ -1.14
TIM54YJL054W GUT1P32190 709 aa7.95□□□□□ -1.14
TIM54YJL054W MSB4Q12317 492 aa7.94□□□□□ -1.14
TIM54YJL054W TY1B-NL2Q99337 1749 aaKnown RBP7.94□□□□□ -1.14
TIM54YJL054W VMR1P38735 1592 aa7.93□□□□□ -1.14
TIM54YJL054W PDR5P33302 1511 aaKnown RBP7.91□□□□□ -1.14
TIM54YJL054W HTA1P04911 132 aaKnown RBP7.9□□□□□ -1.14
TIM54YJL054W HTA2P04912 132 aa7.9□□□□□ -1.14
TIM54YJL054W SPB4P25808 606 aaPredicted RBP7.89□□□□□ -1.15
TIM54YJL054W EAP1P36041 632 aaKnown RBP7.89□□□□□ -1.15
TIM54YJL054W RTG1P32607 177 aa7.87□□□□□ -1.15
TIM54YJL054W TRP5P00931 707 aaKnown RBP7.86□□□□□ -1.15
TIM54YJL054W NCR1Q12200 1170 aa7.86□□□□□ -1.15
TIM54YJL054W SSM4P40318 1319 aa7.85□□□□□ -1.15
TIM54YJL054W REF2P42073 533 aaPredicted RBP7.84□□□□□ -1.15
TIM54YJL054W VHR2P40041 505 aa7.83□□□□□ -1.16
TIM54YJL054W PDR11P40550 1411 aa7.82□□□□□ -1.16
TIM54YJL054W YEL023CP39992 682 aa7.82□□□□□ -1.16
TIM54YJL054W YGR273CP53329 174 aa7.82□□□□□ -1.16
TIM54YJL054W PBS2P08018 668 aa7.81□□□□□ -1.16
TIM54YJL054W SOL3P38858 249 aa7.81□□□□□ -1.16
TIM54YJL054W MRX12P47084 519 aa7.79□□□□□ -1.16
TIM54YJL054W CFT1Q06632 1357 aaKnown RBP7.79□□□□□ -1.16
TIM54YJL054W RIA1P53893 1110 aa7.78□□□□□ -1.16
TIM54YJL054W KRE5P22023 1365 aa7.78□□□□□ -1.16
TIM54YJL054W GCN2P15442 1659 aa7.78□□□□□ -1.16
TIM54YJL054W PTC4P38089 393 aa7.78□□□□□ -1.16
TIM54YJL054W UBP14P38237 781 aaKnown RBP7.77□□□□□ -1.17
TIM54YJL054W YNR029CP53729 429 aaKnown RBP7.76□□□□□ -1.17
TIM54YJL054W PAF1P38351 445 aa7.75□□□□□ -1.17
TIM54YJL054W JIP4Q03361 876 aa7.75□□□□□ -1.17
TIM54YJL054W YLR326WQ06170 240 aaKnown RBP7.75□□□□□ -1.17
TIM54YJL054W KEX1P09620 729 aa7.74□□□□□ -1.17
TIM54YJL054W KIC1P38692 1080 aa7.74□□□□□ -1.17
TIM54YJL054W YNL035CP53962 389 aaKnown RBP7.74□□□□□ -1.17
TIM54YJL054W RAV1P47104 1357 aa7.73□□□□□ -1.17
TIM54YJL054W SEC61P32915 480 aa7.73□□□□□ -1.17
TIM54YJL054W NST1P53935 1240 aa7.73□□□□□ -1.17
TIM54YJL054W BCK1Q01389 1478 aa7.73□□□□□ -1.17
TIM54YJL054W MPH3P0CE00 602 aa7.72□□□□□ -1.17
TIM54YJL054W RAD54P32863 898 aa7.71□□□□□ -1.17
TIM54YJL054W DSF2P38213 736 aa7.71□□□□□ -1.17
TIM54YJL054W ALD4P46367 519 aaKnown RBP7.71□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms