RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C THI12P42883 340 aa5.17□□□□□ -1.58
VPS53YJL029C THI5P43534 340 aa5.17□□□□□ -1.58
VPS53YJL029C THI11P47183 340 aa5.17□□□□□ -1.58
VPS53YJL029C THI13Q07748 340 aa5.17□□□□□ -1.58
VPS53YJL029C PAF1P38351 445 aa5.15□□□□□ -1.59
VPS53YJL029C UBP9P39967 754 aa5.15□□□□□ -1.59
VPS53YJL029C RTC1Q08281 1341 aa5.14□□□□□ -1.59
VPS53YJL029C YAH1Q12184 172 aaKnown RBP5.13□□□□□ -1.59
VPS53YJL029C MRX12P47084 519 aa5.12□□□□□ -1.59
VPS53YJL029C RIM101P33400 625 aa5.11□□□□□ -1.59
VPS53YJL029C TGL3P40308 642 aa5.11□□□□□ -1.59
VPS53YJL029C YNR029CP53729 429 aaKnown RBP5.09□□□□□ -1.59
VPS53YJL029C PTP3P40048 928 aa5.09□□□□□ -1.59
VPS53YJL029C KRE5P22023 1365 aa5.09□□□□□ -1.6
VPS53YJL029C SIS1P25294 352 aaKnown RBP5.08□□□□□ -1.6
VPS53YJL029C ALD4P46367 519 aaKnown RBP5.08□□□□□ -1.6
VPS53YJL029C RIA1P53893 1110 aa5.08□□□□□ -1.6
VPS53YJL029C NAP1P25293 417 aaKnown RBP5.07□□□□□ -1.6
VPS53YJL029C NOP7P53261 605 aaKnown RBP5.06□□□□□ -1.6
VPS53YJL029C YIL055CP40523 627 aaKnown RBP5.06□□□□□ -1.6
VPS53YJL029C YRF1-2P40105 1681 aa5.06□□□□□ -1.6
VPS53YJL029C BCH2P36122 765 aa5.04□□□□□ -1.6
VPS53YJL029C RRP5Q05022 1729 aaKnown RBP5.04□□□□□ -1.6
VPS53YJL029C RAD9P14737 1309 aa5.04□□□□□ -1.6
VPS53YJL029C ESL2P36168 1195 aa5.03□□□□□ -1.6
VPS53YJL029C SCT1P32784 759 aa5.02□□□□□ -1.61
VPS53YJL029C CAB1Q04430 367 aa5.02□□□□□ -1.61
VPS53YJL029C TY3B-IQ7LHG5 1498 aaKnown RBP5.01□□□□□ -1.61
VPS53YJL029C EDE1P34216 1381 aa5□□□□□ -1.61
VPS53YJL029C PSK1P31374 1356 aa4.99□□□□□ -1.61
VPS53YJL029C GLN1P32288 370 aaKnown RBP4.99□□□□□ -1.61
VPS53YJL029C DMA1P38823 416 aa4.98□□□□□ -1.61
VPS53YJL029C TY4B-HP0C2J7 1802 aa4.98□□□□□ -1.61
VPS53YJL029C TY4B-JP47024 1803 aa4.98□□□□□ -1.61
VPS53YJL029C CPS1P27614 576 aa4.98□□□□□ -1.61
VPS53YJL029C ADE6P38972 1358 aaKnown RBP4.97□□□□□ -1.61
VPS53YJL029C BBC1P47068 1157 aa4.96□□□□□ -1.62
VPS53YJL029C YMR074CQ04773 145 aa4.96□□□□□ -1.62
VPS53YJL029C EPS1P40557 701 aa4.96□□□□□ -1.62
VPS53YJL029C APP1P53933 587 aa4.95□□□□□ -1.62
VPS53YJL029C TAF8Q03750 510 aa4.95□□□□□ -1.62
VPS53YJL029C ENT1Q12518 454 aa4.95□□□□□ -1.62
VPS53YJL029C IMH1Q06704 911 aaKnown RBP4.94□□□□□ -1.62
VPS53YJL029C ENV9Q08651 330 aa4.94□□□□□ -1.62
VPS53YJL029C TAF5P38129 798 aa4.93□□□□□ -1.62
VPS53YJL029C PRP43P53131 767 aaKnown RBP4.93□□□□□ -1.62
VPS53YJL029C URB1P34241 1764 aaKnown RBP4.93□□□□□ -1.62
VPS53YJL029C RCM1P53972 490 aa4.91□□□□□ -1.62
VPS53YJL029C SPE2P21182 396 aa4.91□□□□□ -1.62
VPS53YJL029C YLR419WQ06698 1435 aaKnown RBP4.91□□□□□ -1.62
VPS53YJL029C ROM2P51862 1356 aaKnown RBP4.91□□□□□ -1.62
VPS53YJL029C BDF1P35817 686 aa4.9□□□□□ -1.62
VPS53YJL029C YOR238WQ08634 303 aa4.9□□□□□ -1.62
VPS53YJL029C PRP5P21372 849 aaPredicted RBP4.9□□□□□ -1.63
VPS53YJL029C OXP1P28273 1286 aa4.9□□□□□ -1.63
VPS53YJL029C PPH3P32345 308 aa4.9□□□□□ -1.63
VPS53YJL029C MTR4P47047 1073 aaKnown RBP4.9□□□□□ -1.63
VPS53YJL029C FKS3Q04952 1785 aa4.9□□□□□ -1.63
VPS53YJL029C PRP45P28004 379 aaPredicted RBP4.89□□□□□ -1.63
VPS53YJL029C RSF2P46974 1380 aa4.89□□□□□ -1.63
VPS53YJL029C YEF3P16521 1044 aaKnown RBP4.89□□□□□ -1.63
VPS53YJL029C RSM7P47150 247 aa4.88□□□□□ -1.63
VPS53YJL029C YRF1-3P0CX14 1859 aa4.88□□□□□ -1.63
VPS53YJL029C YRF1-7P0CX15 1859 aa4.88□□□□□ -1.63
VPS53YJL029C YRF1-6P53819 1859 aa4.88□□□□□ -1.63
VPS53YJL029C GTT3P39996 337 aa4.88□□□□□ -1.63
VPS53YJL029C LEU2P04173 364 aaPredicted RBP4.87□□□□□ -1.63
VPS53YJL029C UBP1P25037 809 aa4.87□□□□□ -1.63
VPS53YJL029C KIP3P53086 805 aaKnown RBP4.87□□□□□ -1.63
VPS53YJL029C MLP1Q02455 1875 aaKnown RBP4.87□□□□□ -1.63
VPS53YJL029C APC1P53886 1748 aa4.87□□□□□ -1.63
VPS53YJL029C TCB1Q12466 1186 aa4.86□□□□□ -1.63
VPS53YJL029C SLM3Q12093 417 aa4.86□□□□□ -1.63
VPS53YJL029C SNF2P22082 1703 aa4.85□□□□□ -1.63
VPS53YJL029C IES2P40154 320 aa4.85□□□□□ -1.63
VPS53YJL029C YIL177CP40434 1758 aa4.84□□□□□ -1.63
VPS53YJL029C YJL225CP40889 1758 aa4.84□□□□□ -1.63
VPS53YJL029C AI2P03876 854 aa4.84□□□□□ -1.64
VPS53YJL029C CHZ1P40019 153 aaPredicted RBP4.84□□□□□ -1.64
VPS53YJL029C MSB3P48566 633 aaPredicted RBP4.84□□□□□ -1.64
VPS53YJL029C YML133CQ03099 1374 aa4.83□□□□□ -1.64
VPS53YJL029C YLL067CQ07888 1374 aa4.83□□□□□ -1.64
VPS53YJL029C YLL066CQ99208 1374 aa4.83□□□□□ -1.64
VPS53YJL029C YAP5P40574 245 aa4.83□□□□□ -1.64
VPS53YJL029C SIR4P11978 1358 aa4.82□□□□□ -1.64
VPS53YJL029C LEU3P08638 886 aa4.82□□□□□ -1.64
VPS53YJL029C CSE4P36012 229 aa4.82□□□□□ -1.64
VPS53YJL029C FKH1P40466 484 aa4.82□□□□□ -1.64
VPS53YJL029C DOT5P40553 215 aa4.81□□□□□ -1.64
VPS53YJL029C YBL029C-AQ3E756 94 aa4.81□□□□□ -1.64
VPS53YJL029C RTF1P53064 558 aa4.81□□□□□ -1.64
VPS53YJL029C TAP42Q04372 366 aa4.81□□□□□ -1.64
VPS53YJL029C WSC3Q12215 556 aa4.81□□□□□ -1.64
VPS53YJL029C PDI1P17967 522 aaKnown RBP4.8□□□□□ -1.64
VPS53YJL029C GRX4P32642 244 aa4.8□□□□□ -1.64
VPS53YJL029C SPT7P35177 1332 aa4.8□□□□□ -1.64
VPS53YJL029C PRP40P33203 583 aaKnown RBP4.8□□□□□ -1.64
VPS53YJL029C FOX2Q02207 900 aaKnown RBP4.8□□□□□ -1.64
VPS53YJL029C MEC3Q02574 474 aa4.8□□□□□ -1.64
VPS53YJL029C LAM6Q08001 693 aa4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms