RNA–Protein interactions for RNA: YIL013C

PDR11, Transcript of ATP-binding cassette (ABC) transporter, yeast

Gene PDR11, Length 4,236 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR11	YIL013C	PDI1	P17967	522 aa	Known RBP	3.14	□□□□□ -1.91
PDR11	YIL013C	PAP2	P53632	584 aa	Known RBP	3.14	□□□□□ -1.91
PDR11	YIL013C	RCM1	P53972	490 aa		3.14	□□□□□ -1.91
PDR11	YIL013C	PDR5	P33302	1511 aa	Known RBP	3.13	□□□□□ -1.91
PDR11	YIL013C	KAR2	P16474	682 aa	Known RBP	3.13	□□□□□ -1.91
PDR11	YIL013C	MTR4	P47047	1073 aa	Known RBP	3.13	□□□□□ -1.91
PDR11	YIL013C	YBT1	P32386	1661 aa		3.13	□□□□□ -1.91
PDR11	YIL013C	MEC3	Q02574	474 aa		3.13	□□□□□ -1.91
PDR11	YIL013C	YAH1	Q12184	172 aa	Known RBP	3.13	□□□□□ -1.91
PDR11	YIL013C	IMH1	Q06704	911 aa	Known RBP	3.12	□□□□□ -1.91
PDR11	YIL013C	NUP188	P52593	1655 aa	Known RBP	3.12	□□□□□ -1.91
PDR11	YIL013C	ENT1	Q12518	454 aa		3.12	□□□□□ -1.91
PDR11	YIL013C	VMR1	P38735	1592 aa		3.12	□□□□□ -1.91
PDR11	YIL013C	PRP5	P21372	849 aa	Predicted RBP	3.12	□□□□□ -1.91
PDR11	YIL013C	TCB1	Q12466	1186 aa		3.11	□□□□□ -1.91
PDR11	YIL013C	GRX4	P32642	244 aa		3.11	□□□□□ -1.91
PDR11	YIL013C	PDS5	Q04264	1277 aa		3.11	□□□□□ -1.91
PDR11	YIL013C	GCN2	P15442	1659 aa		3.11	□□□□□ -1.91
PDR11	YIL013C	SEC3	P33332	1336 aa	Known RBP	3.11	□□□□□ -1.91
PDR11	YIL013C	PDR11	P40550	1411 aa		3.11	□□□□□ -1.91
PDR11	YIL013C	YEF3	P16521	1044 aa	Known RBP	3.1	□□□□□ -1.91
PDR11	YIL013C	PTP3	P40048	928 aa		3.1	□□□□□ -1.91
PDR11	YIL013C	DPS1	P04802	557 aa	Known RBP	3.1	□□□□□ -1.91
PDR11	YIL013C	RRT14	P40470	206 aa		3.1	□□□□□ -1.91
PDR11	YIL013C	YIL055C	P40523	627 aa	Known RBP	3.1	□□□□□ -1.91
PDR11	YIL013C	ATG13	Q06628	738 aa		3.09	□□□□□ -1.91
PDR11	YIL013C	UGA2	P38067	497 aa		3.09	□□□□□ -1.91
PDR11	YIL013C	ENV9	Q08651	330 aa		3.09	□□□□□ -1.91
PDR11	YIL013C	CPS1	P27614	576 aa		3.09	□□□□□ -1.92
PDR11	YIL013C	APP1	P53933	587 aa		3.09	□□□□□ -1.92
PDR11	YIL013C	MHP1	P43638	1398 aa		3.08	□□□□□ -1.92
PDR11	YIL013C	REB1	P21538	810 aa		3.08	□□□□□ -1.92
PDR11	YIL013C	BCK1	Q01389	1478 aa		3.08	□□□□□ -1.92
PDR11	YIL013C	RPS24A	P0CX31	135 aa	Known RBP	3.08	□□□□□ -1.92
PDR11	YIL013C	RPS24B	P0CX32	135 aa	Known RBP	3.08	□□□□□ -1.92
PDR11	YIL013C	DMA1	P38823	416 aa		3.08	□□□□□ -1.92
PDR11	YIL013C	IES2	P40154	320 aa		3.08	□□□□□ -1.92
PDR11	YIL013C	GAS4	Q08271	471 aa		3.08	□□□□□ -1.92
PDR11	YIL013C	YKL133C	P36066	463 aa		3.07	□□□□□ -1.92
PDR11	YIL013C	ALD2	P47771	506 aa		3.07	□□□□□ -1.92
PDR11	YIL013C	AVT3	P36062	692 aa		3.07	□□□□□ -1.92
PDR11	YIL013C	XKS1	P42826	600 aa		3.07	□□□□□ -1.92
PDR11	YIL013C	PSK1	P31374	1356 aa		3.06	□□□□□ -1.92
PDR11	YIL013C	SPT7	P35177	1332 aa		3.06	□□□□□ -1.92
PDR11	YIL013C	YMR074C	Q04773	145 aa		3.06	□□□□□ -1.92
PDR11	YIL013C	NOP8	Q08287	484 aa	Predicted RBP	3.06	□□□□□ -1.92
PDR11	YIL013C	ALD3	P54114	506 aa		3.06	□□□□□ -1.92
PDR11	YIL013C	EDE1	P34216	1381 aa		3.05	□□□□□ -1.92
PDR11	YIL013C	HPC2	Q01448	625 aa		3.05	□□□□□ -1.92
PDR11	YIL013C	SUP35	P05453	685 aa	Known RBP	3.05	□□□□□ -1.92
PDR11	YIL013C	MDG1	P53885	366 aa		3.05	□□□□□ -1.92
PDR11	YIL013C	RTG3	P38165	486 aa		3.04	□□□□□ -1.92
PDR11	YIL013C	FPR3	P38911	411 aa	Known RBP	3.04	□□□□□ -1.92
PDR11	YIL013C	YFR016C	P43597	1233 aa	Known RBP	3.04	□□□□□ -1.92
PDR11	YIL013C	YBP2	P53169	641 aa		3.04	□□□□□ -1.92
PDR11	YIL013C	NSE3	Q05541	303 aa		3.04	□□□□□ -1.92
PDR11	YIL013C	AOS1	Q06624	347 aa		3.04	□□□□□ -1.92
PDR11	YIL013C	SLM3	Q12093	417 aa		3.04	□□□□□ -1.92
PDR11	YIL013C	PPH3	P32345	308 aa		3.04	□□□□□ -1.92
PDR11	YIL013C	RTR1	P40084	226 aa	Predicted RBP	3.04	□□□□□ -1.92
PDR11	YIL013C	TAP42	Q04372	366 aa		3.04	□□□□□ -1.92
PDR11	YIL013C	YRF1-2	P40105	1681 aa		3.04	□□□□□ -1.92
PDR11	YIL013C	CTF4	Q01454	927 aa		3.04	□□□□□ -1.92
PDR11	YIL013C	ROM2	P51862	1356 aa	Known RBP	3.03	□□□□□ -1.92
PDR11	YIL013C	GLN1	P32288	370 aa	Known RBP	3.03	□□□□□ -1.92
PDR11	YIL013C	SAP155	P43612	1002 aa		3.03	□□□□□ -1.92
PDR11	YIL013C	FKH1	P40466	484 aa		3.03	□□□□□ -1.92
PDR11	YIL013C	MSB3	P48566	633 aa	Predicted RBP	3.03	□□□□□ -1.92
PDR11	YIL013C	BUG1	Q12191	341 aa		3.03	□□□□□ -1.92
PDR11	YIL013C	RSF2	P46974	1380 aa		3.02	□□□□□ -1.93
PDR11	YIL013C	YLR419W	Q06698	1435 aa	Known RBP	3.02	□□□□□ -1.93
PDR11	YIL013C	HSP104	P31539	908 aa	Known RBP	3.02	□□□□□ -1.93
PDR11	YIL013C	GTT3	P39996	337 aa		3.02	□□□□□ -1.93
PDR11	YIL013C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
PDR11	YIL013C	RPN11	P43588	306 aa	Known RBP	3.02	□□□□□ -1.93
PDR11	YIL013C	MSB4	Q12317	492 aa		3.02	□□□□□ -1.93
PDR11	YIL013C	BUD31	P25337	157 aa	Predicted RBP	3.02	□□□□□ -1.93
PDR11	YIL013C	GRX1	P25373	110 aa	Known RBP	3.02	□□□□□ -1.93
PDR11	YIL013C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
PDR11	YIL013C	RMT2	Q03305	412 aa		3.02	□□□□□ -1.93
PDR11	YIL013C	PKH1	Q03407	766 aa		3.02	□□□□□ -1.93
PDR11	YIL013C	YRF1-4	O13559	1382 aa		3.02	□□□□□ -1.93
PDR11	YIL013C	MAK21	Q12176	1025 aa	Known RBP	3.01	□□□□□ -1.93
PDR11	YIL013C	PRP43	P53131	767 aa	Known RBP	3.01	□□□□□ -1.93
PDR11	YIL013C	UGA3	P26370	528 aa		3.01	□□□□□ -1.93
PDR11	YIL013C	IRC3	Q06683	689 aa		3.01	□□□□□ -1.93
PDR11	YIL013C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.01	□□□□□ -1.93
PDR11	YIL013C	KCC4	P25389	1037 aa		3	□□□□□ -1.93
PDR11	YIL013C	ZDS1	P50111	915 aa	Known RBP	3	□□□□□ -1.93
PDR11	YIL013C	ADE6	P38972	1358 aa	Known RBP	3	□□□□□ -1.93
PDR11	YIL013C	SSA2	P10592	639 aa	Known RBP	3	□□□□□ -1.93
PDR11	YIL013C	AKL1	P38080	1108 aa	Known RBP	3	□□□□□ -1.93
PDR11	YIL013C	COB	P00163	385 aa		3	□□□□□ -1.93
PDR11	YIL013C	BDF1	P35817	686 aa		3	□□□□□ -1.93
PDR11	YIL013C	TIF4632	P39936	914 aa	Known RBP	3	□□□□□ -1.93
PDR11	YIL013C	MAM1	P40065	302 aa		3	□□□□□ -1.93
PDR11	YIL013C	RPO41	P13433	1351 aa	Known RBP	2.99	□□□□□ -1.93
PDR11	YIL013C	YBL086C	P38177	466 aa		2.99	□□□□□ -1.93
PDR11	YIL013C	SEN54	Q02825	467 aa	Predicted RBP	2.99	□□□□□ -1.93
PDR11	YIL013C	FRK1	Q03002	865 aa	Predicted RBP	2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms