RNA–Protein interactions for RNA: YHR197W

RIX1, Transcript of Component of the Rix1 complex and possibly pre-replicative complexes, yeastyeast

Gene RIX1, Length 2,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIX1YHR197W HPC2Q01448 625 aa4.08□□□□□ -1.76
RIX1YHR197W SEN54Q02825 467 aaPredicted RBP4.08□□□□□ -1.76
RIX1YHR197W GLN1P32288 370 aaKnown RBP4.07□□□□□ -1.76
RIX1YHR197W SWE1P32944 819 aa4.07□□□□□ -1.76
RIX1YHR197W FAR11P53917 953 aa4.07□□□□□ -1.76
RIX1YHR197W TFB3Q03290 321 aa4.07□□□□□ -1.76
RIX1YHR197W STR2P47164 639 aa4.06□□□□□ -1.76
RIX1YHR197W PKC1P24583 1151 aa4.06□□□□□ -1.76
RIX1YHR197W SPC42P36094 363 aa4.06□□□□□ -1.76
RIX1YHR197W NOP7P53261 605 aaKnown RBP4.06□□□□□ -1.76
RIX1YHR197W YTA7P40340 1379 aa4.05□□□□□ -1.76
RIX1YHR197W RPP1BP10622 106 aaKnown RBP4.05□□□□□ -1.76
RIX1YHR197W OCA5P38738 679 aa4.05□□□□□ -1.76
RIX1YHR197W CSC1Q06538 782 aa4.05□□□□□ -1.76
RIX1YHR197W DOS2P54858 310 aa4.05□□□□□ -1.76
RIX1YHR197W BUD20Q08004 166 aaPredicted RBP4.05□□□□□ -1.76
RIX1YHR197W RGR1P19263 1082 aa4.04□□□□□ -1.76
RIX1YHR197W RRN6P32786 894 aa4.04□□□□□ -1.76
RIX1YHR197W IES2P40154 320 aa4.04□□□□□ -1.76
RIX1YHR197W MVP1P40959 511 aaKnown RBP4.04□□□□□ -1.76
RIX1YHR197W TFB4Q12004 338 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-DR4O74302 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-HP0C2I4 478 aaKnown RBP4.04□□□□□ -1.76
RIX1YHR197W TY1A-AP0CX57 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-PR1P0CX58 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-ORP0CX59 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-PR2P0CX60 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-DR5P0CX65 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-ER2P0CX66 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-GR3P0CX67 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-LR1P0CX68 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-MR2P0CX69 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-JR2P47099 440 aa4.04□□□□□ -1.76
RIX1YHR197W HGH1P48362 394 aaKnown RBP4.04□□□□□ -1.76
RIX1YHR197W YRB30P53107 440 aaPredicted RBP4.04□□□□□ -1.76
RIX1YHR197W TY1A-DR1Q03856 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-ML1Q04706 440 aaKnown RBP4.04□□□□□ -1.76
RIX1YHR197W TY1A-BRQ12217 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-NL2Q12470 440 aa4.04□□□□□ -1.76
RIX1YHR197W TY1A-GR2Q12485 440 aa4.04□□□□□ -1.76
RIX1YHR197W SEC2P17065 759 aa4.03□□□□□ -1.76
RIX1YHR197W BRL1P38770 471 aa4.03□□□□□ -1.76
RIX1YHR197W ISM1P48526 1002 aa4.03□□□□□ -1.76
RIX1YHR197W YRR1Q12172 810 aa4.03□□□□□ -1.76
RIX1YHR197W RAS1P01119 309 aa4.02□□□□□ -1.77
RIX1YHR197W DPS1P04802 557 aaKnown RBP4.01□□□□□ -1.77
RIX1YHR197W SSF1P38789 453 aaPredicted RBP4.01□□□□□ -1.77
RIX1YHR197W ATG32P40458 529 aa4.01□□□□□ -1.77
RIX1YHR197W NOB1Q08444 459 aaKnown RBP4.01□□□□□ -1.77
RIX1YHR197W TUM1Q08686 304 aaKnown RBP4.01□□□□□ -1.77
RIX1YHR197W MET10P39692 1035 aa4.01□□□□□ -1.77
RIX1YHR197W BIM1P40013 344 aa4.01□□□□□ -1.77
RIX1YHR197W PEX21P50091 288 aa4.01□□□□□ -1.77
RIX1YHR197W NUG1P40010 520 aaKnown RBP4□□□□□ -1.77
RIX1YHR197W PSE1P32337 1089 aaKnown RBP4□□□□□ -1.77
RIX1YHR197W BRN1P38170 754 aa4□□□□□ -1.77
RIX1YHR197W NUD1P32336 851 aa3.99□□□□□ -1.77
RIX1YHR197W ERG12P07277 443 aa3.98□□□□□ -1.77
RIX1YHR197W ERF2Q06551 359 aa3.98□□□□□ -1.77
RIX1YHR197W TPO2P53283 614 aa3.98□□□□□ -1.77
RIX1YHR197W YPR109WQ06104 294 aa3.98□□□□□ -1.77
RIX1YHR197W HEM3P28789 327 aa3.97□□□□□ -1.77
RIX1YHR197W SSA4P22202 642 aaKnown RBP3.97□□□□□ -1.77
RIX1YHR197W RRP15Q06511 250 aaPredicted RBP3.97□□□□□ -1.77
RIX1YHR197W CPS1P27614 576 aa3.96□□□□□ -1.78
RIX1YHR197W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
RIX1YHR197W SAS4Q04003 481 aa3.96□□□□□ -1.78
RIX1YHR197W GYP1Q08484 637 aa3.96□□□□□ -1.78
RIX1YHR197W TIF1P10081 395 aaKnown RBP3.95□□□□□ -1.78
RIX1YHR197W SLD2P34252 453 aa3.95□□□□□ -1.78
RIX1YHR197W TTI1P36097 1038 aa3.95□□□□□ -1.78
RIX1YHR197W ALD4P46367 519 aaKnown RBP3.95□□□□□ -1.78
RIX1YHR197W ALD2P47771 506 aa3.95□□□□□ -1.78
RIX1YHR197W PRT1P06103 763 aaKnown RBP3.95□□□□□ -1.78
RIX1YHR197W YJL007CP47080 104 aa3.95□□□□□ -1.78
RIX1YHR197W YJR008WP47085 338 aa3.95□□□□□ -1.78
RIX1YHR197W AGE1Q04412 482 aa3.95□□□□□ -1.78
RIX1YHR197W AMS1P22855 1083 aa3.94□□□□□ -1.78
RIX1YHR197W KTR1P27810 393 aaKnown RBP3.94□□□□□ -1.78
RIX1YHR197W CDC3P32457 520 aaKnown RBP3.94□□□□□ -1.78
RIX1YHR197W YML083CQ04526 418 aa3.94□□□□□ -1.78
RIX1YHR197W CST6P40535 587 aa3.93□□□□□ -1.78
RIX1YHR197W IPL1P38991 367 aa3.93□□□□□ -1.78
RIX1YHR197W KEX2P13134 814 aa3.92□□□□□ -1.78
RIX1YHR197W CLB5P30283 435 aa3.92□□□□□ -1.78
RIX1YHR197W CLA4P48562 842 aa3.92□□□□□ -1.78
RIX1YHR197W ATF2P53296 535 aa3.92□□□□□ -1.78
RIX1YHR197W PUP1P25043 261 aa3.92□□□□□ -1.78
RIX1YHR197W BIO2P32451 375 aa3.92□□□□□ -1.78
RIX1YHR197W NPL4P33755 580 aa3.92□□□□□ -1.78
RIX1YHR197W RTS3P53289 263 aa3.92□□□□□ -1.78
RIX1YHR197W YAF9P53930 226 aa3.92□□□□□ -1.78
RIX1YHR197W SIT4P20604 311 aa3.91□□□□□ -1.78
RIX1YHR197W ATE1P16639 503 aa3.91□□□□□ -1.78
RIX1YHR197W GCD11P32481 527 aaKnown RBP3.91□□□□□ -1.78
RIX1YHR197W MDG1P53885 366 aa3.91□□□□□ -1.78
RIX1YHR197W GIN4Q12263 1142 aa3.91□□□□□ -1.78
RIX1YHR197W HAT1Q12341 374 aa3.91□□□□□ -1.78
RIX1YHR197W NIS1P53939 407 aa3.9□□□□□ -1.79
RIX1YHR197W UBX5Q06682 500 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms