RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W SPE2P21182 396 aa15.28■□□□□ 0.04
SNF6YHL025W MHP1P43638 1398 aa15.26■□□□□ 0.03
SNF6YHL025W REB1P21538 810 aa15.2■□□□□ 0.02
SNF6YHL025W SEC3P33332 1336 aaKnown RBP15.16■□□□□ 0.02
SNF6YHL025W YMR074CQ04773 145 aa15.13■□□□□ 0.01
SNF6YHL025W ENT1Q12518 454 aa15.12■□□□□ 0.01
SNF6YHL025W CHZ1P40019 153 aaPredicted RBP15.1■□□□□ 0.01
SNF6YHL025W PDS5Q04264 1277 aa15.09■□□□□ 0.01
SNF6YHL025W ENV9Q08651 330 aa15.08■□□□□ 0
SNF6YHL025W PRI1P10363 409 aa15.07■□□□□ 0
SNF6YHL025W RCM1P53972 490 aa15.07■□□□□ 0
SNF6YHL025W PSK1P31374 1356 aa15.07■□□□□ 0
SNF6YHL025W CPS1P27614 576 aa15.04■□□□□ -0
SNF6YHL025W PPH3P32345 308 aa15.02■□□□□ -0
SNF6YHL025W IMH1Q06704 911 aaKnown RBP15.02■□□□□ -0
SNF6YHL025W YRF1-2P40105 1681 aa15.02□□□□□ -0.01
SNF6YHL025W RRP5Q05022 1729 aaKnown RBP15.01□□□□□ -0.01
SNF6YHL025W SPT7P35177 1332 aa15□□□□□ -0.01
SNF6YHL025W FKH1P40466 484 aa15□□□□□ -0.01
SNF6YHL025W YML133CQ03099 1374 aa14.97□□□□□ -0.01
SNF6YHL025W YLL067CQ07888 1374 aa14.97□□□□□ -0.01
SNF6YHL025W YLL066CQ99208 1374 aa14.97□□□□□ -0.01
SNF6YHL025W MLP1Q02455 1875 aaKnown RBP14.95□□□□□ -0.02
SNF6YHL025W RTG3P38165 486 aa14.95□□□□□ -0.02
SNF6YHL025W PSD2P53037 1138 aaKnown RBP14.94□□□□□ -0.02
SNF6YHL025W BUD31P25337 157 aaPredicted RBP14.92□□□□□ -0.02
SNF6YHL025W LEU2P04173 364 aaPredicted RBP14.9□□□□□ -0.02
SNF6YHL025W ADE6P38972 1358 aaKnown RBP14.89□□□□□ -0.03
SNF6YHL025W MTR4P47047 1073 aaKnown RBP14.89□□□□□ -0.03
SNF6YHL025W PRP45P28004 379 aaPredicted RBP14.88□□□□□ -0.03
SNF6YHL025W ENP1P38333 483 aaKnown RBP14.87□□□□□ -0.03
SNF6YHL025W LEU3P08638 886 aa14.83□□□□□ -0.04
SNF6YHL025W PRP43P53131 767 aaKnown RBP14.83□□□□□ -0.04
SNF6YHL025W NST1P53935 1240 aa14.83□□□□□ -0.04
SNF6YHL025W TY4B-HP0C2J7 1802 aa14.82□□□□□ -0.04
SNF6YHL025W TY4B-JP47024 1803 aa14.82□□□□□ -0.04
SNF6YHL025W PDI1P17967 522 aaKnown RBP14.8□□□□□ -0.04
SNF6YHL025W TAP42Q04372 366 aa14.79□□□□□ -0.04
SNF6YHL025W PRP5P21372 849 aaPredicted RBP14.77□□□□□ -0.05
SNF6YHL025W CSE4P36012 229 aa14.76□□□□□ -0.05
SNF6YHL025W RTF1P53064 558 aa14.76□□□□□ -0.05
SNF6YHL025W RPS24AP0CX31 135 aaKnown RBP14.75□□□□□ -0.05
SNF6YHL025W RPS24BP0CX32 135 aaKnown RBP14.75□□□□□ -0.05
SNF6YHL025W YEF3P16521 1044 aaKnown RBP14.75□□□□□ -0.05
SNF6YHL025W NSR1P27476 414 aaKnown RBP RIP-Chip data14.73□□□□□ -0.05 RIP-Chip
SNF6YHL025W GRX4P32642 244 aa14.73□□□□□ -0.05
SNF6YHL025W URB1P34241 1764 aaKnown RBP14.73□□□□□ -0.05
SNF6YHL025W UBP1P25037 809 aa14.72□□□□□ -0.05
SNF6YHL025W TRK1P12685 1235 aa14.7□□□□□ -0.06
SNF6YHL025W IOC4Q04213 475 aa14.7□□□□□ -0.06
SNF6YHL025W AUS1Q08409 1394 aa14.7□□□□□ -0.06
SNF6YHL025W KAR2P16474 682 aaKnown RBP14.69□□□□□ -0.06
SNF6YHL025W MSB3P48566 633 aaPredicted RBP14.69□□□□□ -0.06
SNF6YHL025W RPN11P43588 306 aaKnown RBP14.67□□□□□ -0.06
SNF6YHL025W DOT5P40553 215 aa14.66□□□□□ -0.06
SNF6YHL025W HIM1Q06674 414 aa14.65□□□□□ -0.06
SNF6YHL025W EDE1P34216 1381 aa14.64□□□□□ -0.07
SNF6YHL025W IES2P40154 320 aa14.64□□□□□ -0.07
SNF6YHL025W DPS1P04802 557 aaKnown RBP14.63□□□□□ -0.07
SNF6YHL025W YBL086CP38177 466 aa14.63□□□□□ -0.07
SNF6YHL025W GAS4Q08271 471 aa14.63□□□□□ -0.07
SNF6YHL025W FKS3Q04952 1785 aa14.61□□□□□ -0.07
SNF6YHL025W ROM2P51862 1356 aaKnown RBP14.6□□□□□ -0.07
SNF6YHL025W RSF2P46974 1380 aa14.6□□□□□ -0.07
SNF6YHL025W TCB1Q12466 1186 aa14.59□□□□□ -0.07
SNF6YHL025W RPO41P13433 1351 aaKnown RBP14.59□□□□□ -0.07
SNF6YHL025W GTT3P39996 337 aa14.58□□□□□ -0.08
SNF6YHL025W FOX2Q02207 900 aaKnown RBP14.58□□□□□ -0.08
SNF6YHL025W SLM3Q12093 417 aa14.58□□□□□ -0.08
SNF6YHL025W NPR2P39923 615 aa14.56□□□□□ -0.08
SNF6YHL025W PAP2P53632 584 aaKnown RBP14.56□□□□□ -0.08
SNF6YHL025W SNF2P22082 1703 aa14.55□□□□□ -0.08
SNF6YHL025W UGA2P38067 497 aa14.55□□□□□ -0.08
SNF6YHL025W RPP0P05317 312 aaKnown RBP14.54□□□□□ -0.08
SNF6YHL025W PRS1P32895 427 aaKnown RBP14.54□□□□□ -0.08
SNF6YHL025W RRP46P53256 223 aaPredicted RBP14.54□□□□□ -0.08
SNF6YHL025W YIL177CP40434 1758 aa14.54□□□□□ -0.08
SNF6YHL025W YJL225CP40889 1758 aa14.54□□□□□ -0.08
SNF6YHL025W YRF1-3P0CX14 1859 aa14.54□□□□□ -0.08
SNF6YHL025W YRF1-7P0CX15 1859 aa14.54□□□□□ -0.08
SNF6YHL025W YRF1-6P53819 1859 aa14.54□□□□□ -0.08
SNF6YHL025W LYS4P49367 693 aaPredicted RBP14.52□□□□□ -0.09
SNF6YHL025W RTR1P40084 226 aaPredicted RBP14.51□□□□□ -0.09
SNF6YHL025W YJL181WP46987 611 aa14.5□□□□□ -0.09
SNF6YHL025W YDL144CQ07589 356 aa14.5□□□□□ -0.09
SNF6YHL025W ALD2P47771 506 aa14.48□□□□□ -0.09
SNF6YHL025W VPS27P40343 622 aaKnown RBP14.47□□□□□ -0.09
SNF6YHL025W APC1P53886 1748 aa14.46□□□□□ -0.09
SNF6YHL025W SSA1P10591 642 aaKnown RBP14.46□□□□□ -0.09
SNF6YHL025W SSA2P10592 639 aaKnown RBP14.46□□□□□ -0.09
SNF6YHL025W BUB1P41695 1021 aaKnown RBP RIP-Chip data14.45□□□□□ -0.1not detected
SNF6YHL025W XKS1P42826 600 aa14.45□□□□□ -0.1
SNF6YHL025W LAM6Q08001 693 aa14.45□□□□□ -0.1
SNF6YHL025W CDC45Q08032 650 aa14.45□□□□□ -0.1
SNF6YHL025W PRD1P25375 712 aa14.44□□□□□ -0.1
SNF6YHL025W PRP40P33203 583 aaKnown RBP14.44□□□□□ -0.1
SNF6YHL025W AKL1P38080 1108 aaKnown RBP14.44□□□□□ -0.1
SNF6YHL025W MPP10P47083 593 aaKnown RBP14.44□□□□□ -0.1
SNF6YHL025W YKL133CP36066 463 aa14.43□□□□□ -0.1
SNF6YHL025W CTH1P47976 325 aa14.43□□□□□ -0.1
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms