RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W NAP1P25293 417 aaKnown RBP12.96□□□□□ -0.33
CPD1YGR247W TAF5P38129 798 aa12.96□□□□□ -0.33
CPD1YGR247W UBP1P25037 809 aa12.94□□□□□ -0.34
CPD1YGR247W CPS1P27614 576 aa12.94□□□□□ -0.34
CPD1YGR247W LEU3P08638 886 aa12.91□□□□□ -0.34
CPD1YGR247W PRP5P21372 849 aaPredicted RBP12.88□□□□□ -0.35
CPD1YGR247W NOP7P53261 605 aaKnown RBP12.88□□□□□ -0.35
CPD1YGR247W RCM1P53972 490 aa12.86□□□□□ -0.35
CPD1YGR247W TAF8Q03750 510 aa12.86□□□□□ -0.35
CPD1YGR247W TY4B-HP0C2J7 1802 aa12.83□□□□□ -0.35
CPD1YGR247W TY4B-JP47024 1803 aa12.83□□□□□ -0.35
CPD1YGR247W YBL086CP38177 466 aa12.83□□□□□ -0.36
CPD1YGR247W RPN11P43588 306 aaKnown RBP12.83□□□□□ -0.36
CPD1YGR247W EDE1P34216 1381 aa12.82□□□□□ -0.36
CPD1YGR247W ESL2P36168 1195 aa12.82□□□□□ -0.36
CPD1YGR247W URB1P34241 1764 aaKnown RBP12.8□□□□□ -0.36
CPD1YGR247W GTT3P39996 337 aa12.8□□□□□ -0.36
CPD1YGR247W PSK1P31374 1356 aa12.8□□□□□ -0.36
CPD1YGR247W PPH3P32345 308 aa12.79□□□□□ -0.36
CPD1YGR247W DOT5P40553 215 aa12.79□□□□□ -0.36
CPD1YGR247W UGA2P38067 497 aa12.78□□□□□ -0.36
CPD1YGR247W IES2P40154 320 aa12.78□□□□□ -0.36
CPD1YGR247W MSB3P48566 633 aaPredicted RBP12.78□□□□□ -0.36
CPD1YGR247W ADE6P38972 1358 aaKnown RBP12.77□□□□□ -0.37
CPD1YGR247W ROM2P51862 1356 aaKnown RBP12.75□□□□□ -0.37
CPD1YGR247W SSA1P10591 642 aaKnown RBP12.73□□□□□ -0.37
CPD1YGR247W TCB1Q12466 1186 aa12.73□□□□□ -0.37
CPD1YGR247W YJL181WP46987 611 aa12.72□□□□□ -0.37
CPD1YGR247W FOX2Q02207 900 aaKnown RBP12.72□□□□□ -0.37
CPD1YGR247W RSF2P46974 1380 aa12.71□□□□□ -0.37
CPD1YGR247W NPR2P39923 615 aa12.71□□□□□ -0.37
CPD1YGR247W ALD2P47771 506 aa12.71□□□□□ -0.37
CPD1YGR247W YEF3P16521 1044 aaKnown RBP12.7□□□□□ -0.38
CPD1YGR247W LYS4P49367 693 aaPredicted RBP12.7□□□□□ -0.38
CPD1YGR247W FKS3Q04952 1785 aa12.69□□□□□ -0.38
CPD1YGR247W SSA2P10592 639 aaKnown RBP12.68□□□□□ -0.38
CPD1YGR247W SLM3Q12093 417 aa12.66□□□□□ -0.38
CPD1YGR247W PRP40P33203 583 aaKnown RBP12.65□□□□□ -0.38
CPD1YGR247W LAM6Q08001 693 aa12.65□□□□□ -0.38
CPD1YGR247W YRF1-3P0CX14 1859 aa12.61□□□□□ -0.39
CPD1YGR247W YRF1-7P0CX15 1859 aa12.61□□□□□ -0.39
CPD1YGR247W YRF1-6P53819 1859 aa12.61□□□□□ -0.39
CPD1YGR247W SPE2P21182 396 aa12.6□□□□□ -0.39
CPD1YGR247W CTH1P47976 325 aa12.6□□□□□ -0.39
CPD1YGR247W PRP43P53131 767 aaKnown RBP12.6□□□□□ -0.39
CPD1YGR247W YKL133CP36066 463 aa12.59□□□□□ -0.39
CPD1YGR247W ENP1P38333 483 aaKnown RBP12.59□□□□□ -0.39
CPD1YGR247W CSE4P36012 229 aa12.58□□□□□ -0.4
CPD1YGR247W MTR4P47047 1073 aaKnown RBP12.58□□□□□ -0.4
CPD1YGR247W COBP00163 385 aa12.57□□□□□ -0.4
CPD1YGR247W LEU2P04173 364 aaPredicted RBP12.57□□□□□ -0.4
CPD1YGR247W RPS24AP0CX31 135 aaKnown RBP12.54□□□□□ -0.4
CPD1YGR247W RPS24BP0CX32 135 aaKnown RBP12.54□□□□□ -0.4
CPD1YGR247W YKR075CP36155 307 aa12.54□□□□□ -0.4
CPD1YGR247W XKS1P42826 600 aa12.53□□□□□ -0.4
CPD1YGR247W KIP3P53086 805 aaKnown RBP12.53□□□□□ -0.4
CPD1YGR247W YRF1-4O13559 1382 aa12.5□□□□□ -0.41
CPD1YGR247W APC1P53886 1748 aa12.48□□□□□ -0.41
CPD1YGR247W SPT7P35177 1332 aa12.48□□□□□ -0.41
CPD1YGR247W CHZ1P40019 153 aaPredicted RBP12.48□□□□□ -0.41
CPD1YGR247W YIL177CP40434 1758 aa12.46□□□□□ -0.42
CPD1YGR247W YJL225CP40889 1758 aa12.46□□□□□ -0.42
CPD1YGR247W BDF1P35817 686 aa12.45□□□□□ -0.42
CPD1YGR247W ALD3P54114 506 aa12.43□□□□□ -0.42
CPD1YGR247W MEC3Q02574 474 aa12.41□□□□□ -0.42
CPD1YGR247W RPG1P38249 964 aaKnown RBP12.39□□□□□ -0.43
CPD1YGR247W FRK1Q03002 865 aaPredicted RBP12.39□□□□□ -0.43
CPD1YGR247W SNF2P22082 1703 aa12.39□□□□□ -0.43
CPD1YGR247W YLR419WQ06698 1435 aaKnown RBP12.38□□□□□ -0.43
CPD1YGR247W RRD1P40454 393 aaKnown RBP12.37□□□□□ -0.43
CPD1YGR247W SIR4P11978 1358 aa12.36□□□□□ -0.43
CPD1YGR247W YML133CQ03099 1374 aa12.36□□□□□ -0.43
CPD1YGR247W YLL067CQ07888 1374 aa12.36□□□□□ -0.43
CPD1YGR247W YLL066CQ99208 1374 aa12.36□□□□□ -0.43
CPD1YGR247W SCT1P32784 759 aa12.36□□□□□ -0.43
CPD1YGR247W MSB4Q12317 492 aa12.36□□□□□ -0.43
CPD1YGR247W RCR1P38212 213 aa12.34□□□□□ -0.43
CPD1YGR247W ADE16P54113 591 aaKnown RBP12.34□□□□□ -0.43
CPD1YGR247W DPS1P04802 557 aaKnown RBP12.33□□□□□ -0.44
CPD1YGR247W BUG1Q12191 341 aa12.31□□□□□ -0.44
CPD1YGR247W EAF6P47128 113 aa12.3□□□□□ -0.44
CPD1YGR247W GAS4Q08271 471 aa12.3□□□□□ -0.44
CPD1YGR247W SAP155P43612 1002 aa12.29□□□□□ -0.44
CPD1YGR247W RTF1P53064 558 aa12.29□□□□□ -0.44
CPD1YGR247W ORC1P54784 914 aaPredicted RBP12.29□□□□□ -0.44
CPD1YGR247W RPO41P13433 1351 aaKnown RBP12.29□□□□□ -0.44
CPD1YGR247W ATG13Q06628 738 aa12.28□□□□□ -0.44
CPD1YGR247W RIM15P43565 1770 aa12.27□□□□□ -0.45
CPD1YGR247W RAD4P14736 754 aa12.26□□□□□ -0.45
CPD1YGR247W PDI1P17967 522 aaKnown RBP12.26□□□□□ -0.45
CPD1YGR247W TOS1P38288 455 aa12.26□□□□□ -0.45
CPD1YGR247W UTP22P53254 1237 aaPredicted RBP12.26□□□□□ -0.45
CPD1YGR247W GRE2Q12068 342 aaKnown RBP12.25□□□□□ -0.45
CPD1YGR247W MSN5P52918 1224 aa12.23□□□□□ -0.45
CPD1YGR247W GRX1P25373 110 aaKnown RBP12.22□□□□□ -0.45
CPD1YGR247W FKH1P40466 484 aa12.22□□□□□ -0.45
CPD1YGR247W HPC2Q01448 625 aa12.21□□□□□ -0.45
CPD1YGR247W CTT1P06115 562 aa12.2□□□□□ -0.46
CPD1YGR247W SEC3P33332 1336 aaKnown RBP12.18□□□□□ -0.46
CPD1YGR247W OSM1P21375 501 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms