RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeastyeast

Gene PEX4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX4YGR133W TY1A-DR1Q03856 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-ML1Q04706 440 aaKnown RBP6.91□□□□□ -1.3
PEX4YGR133W CSC1Q06538 782 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-BRQ12217 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-NL2Q12470 440 aa6.91□□□□□ -1.3
PEX4YGR133W TY1A-GR2Q12485 440 aa6.91□□□□□ -1.3
PEX4YGR133W SPT16P32558 1035 aaKnown RBP6.9□□□□□ -1.3
PEX4YGR133W SEC2P17065 759 aa6.89□□□□□ -1.31
PEX4YGR133W CDC4P07834 779 aa6.86□□□□□ -1.31
PEX4YGR133W MET22P32179 357 aa6.85□□□□□ -1.31
PEX4YGR133W BDP1P46678 594 aa6.85□□□□□ -1.31
PEX4YGR133W ORC6P38826 435 aa6.84□□□□□ -1.31
PEX4YGR133W RRN7P40992 514 aa6.84□□□□□ -1.31
PEX4YGR133W IFH1P39520 1085 aa6.8□□□□□ -1.32
PEX4YGR133W ENV9Q08651 330 aa6.8□□□□□ -1.32
PEX4YGR133W REF2P42073 533 aaPredicted RBP6.79□□□□□ -1.32
PEX4YGR133W MVP1P40959 511 aaKnown RBP6.77□□□□□ -1.33
PEX4YGR133W HED1Q03937 162 aa6.76□□□□□ -1.33
PEX4YGR133W YDR444WQ04093 687 aa6.76□□□□□ -1.33
PEX4YGR133W PAT1P25644 796 aaKnown RBP6.75□□□□□ -1.33
PEX4YGR133W YPR109WQ06104 294 aa6.74□□□□□ -1.33
PEX4YGR133W ERF2Q06551 359 aa6.73□□□□□ -1.33
PEX4YGR133W KEX2P13134 814 aa6.71□□□□□ -1.34
PEX4YGR133W RGR1P19263 1082 aa6.7□□□□□ -1.34
PEX4YGR133W ASH1P34233 588 aa6.7□□□□□ -1.34
PEX4YGR133W YPR148CQ06523 435 aa6.7□□□□□ -1.34
PEX4YGR133W YDL176WQ12027 708 aa6.7□□□□□ -1.34
PEX4YGR133W MET32Q12041 191 aa6.7□□□□□ -1.34
PEX4YGR133W LCB5Q06147 687 aaKnown RBP6.68□□□□□ -1.34
PEX4YGR133W COX6P00427 148 aa6.67□□□□□ -1.34
PEX4YGR133W PAC1P39946 494 aaKnown RBP6.67□□□□□ -1.34
PEX4YGR133W AFT1P22149 690 aa6.65□□□□□ -1.34
PEX4YGR133W PUS5Q06244 254 aa6.65□□□□□ -1.34
PEX4YGR133W MOD5P07884 428 aa6.64□□□□□ -1.35
PEX4YGR133W VPS70P47161 811 aa6.64□□□□□ -1.35
PEX4YGR133W HST3P53687 447 aa6.64□□□□□ -1.35
PEX4YGR133W MAK21Q12176 1025 aaKnown RBP6.63□□□□□ -1.35
PEX4YGR133W RRD1P40454 393 aaKnown RBP6.61□□□□□ -1.35
PEX4YGR133W YJR115WP47152 169 aa6.59□□□□□ -1.35
PEX4YGR133W AGE1Q04412 482 aa6.59□□□□□ -1.35
PEX4YGR133W TUB4P53378 473 aa6.58□□□□□ -1.36
PEX4YGR133W CAF120P53836 1060 aa6.52□□□□□ -1.37
PEX4YGR133W PSE1P32337 1089 aaKnown RBP6.47□□□□□ -1.37
PEX4YGR133W MSB3P48566 633 aaPredicted RBP6.46□□□□□ -1.38
PEX4YGR133W YNL115CP53925 644 aa6.46□□□□□ -1.38
PEX4YGR133W ACO2P39533 789 aa6.45□□□□□ -1.38
PEX4YGR133W RTF1P53064 558 aa6.45□□□□□ -1.38
PEX4YGR133W MTC5Q03897 1148 aa6.45□□□□□ -1.38
PEX4YGR133W CLB5P30283 435 aa6.44□□□□□ -1.38
PEX4YGR133W KXD1P53158 218 aa6.44□□□□□ -1.38
PEX4YGR133W OPT2Q06593 877 aa6.44□□□□□ -1.38
PEX4YGR133W SYH1Q02875 849 aaKnown RBP6.43□□□□□ -1.38
PEX4YGR133W UGA3P26370 528 aa6.42□□□□□ -1.38
PEX4YGR133W PTK2P47116 818 aaKnown RBP6.42□□□□□ -1.38
PEX4YGR133W PBS2P08018 668 aa6.41□□□□□ -1.38
PEX4YGR133W HXT10P43581 546 aa6.41□□□□□ -1.38
PEX4YGR133W TRK2P28584 889 aa6.4□□□□□ -1.38
PEX4YGR133W TPD3P31383 635 aa6.4□□□□□ -1.38
PEX4YGR133W PDC1P06169 563 aaKnown RBP6.39□□□□□ -1.39
PEX4YGR133W SIT4P20604 311 aa6.39□□□□□ -1.39
PEX4YGR133W SRF1Q12516 437 aa6.39□□□□□ -1.39
PEX4YGR133W YGR035CP53222 116 aa6.38□□□□□ -1.39
PEX4YGR133W YLR346CQ06139 101 aa6.37□□□□□ -1.39
PEX4YGR133W YIR007WP40566 764 aa6.36□□□□□ -1.39
PEX4YGR133W NIS1P53939 407 aa6.35□□□□□ -1.39
PEX4YGR133W KIP2P28743 706 aa6.34□□□□□ -1.39
PEX4YGR133W HPF1Q05164 967 aa6.34□□□□□ -1.39
PEX4YGR133W GLY1P37303 387 aaKnown RBP6.33□□□□□ -1.4
PEX4YGR133W TEA1P47988 759 aa6.33□□□□□ -1.4
PEX4YGR133W TYW1Q08960 810 aaKnown RBP6.33□□□□□ -1.4
PEX4YGR133W NUP85P46673 744 aa6.32□□□□□ -1.4
PEX4YGR133W SCW11P53189 542 aa6.32□□□□□ -1.4
PEX4YGR133W MAM3Q12296 706 aa6.32□□□□□ -1.4
PEX4YGR133W SLY41P22215 453 aa6.31□□□□□ -1.4
PEX4YGR133W CKB1P43639 278 aa6.31□□□□□ -1.4
PEX4YGR133W IXR1P33417 597 aa6.3□□□□□ -1.4
PEX4YGR133W IES2P40154 320 aa6.3□□□□□ -1.4
PEX4YGR133W TY1A-BLQ12266 440 aa6.3□□□□□ -1.4
PEX4YGR133W MIP1P15801 1254 aa6.29□□□□□ -1.4
PEX4YGR133W MRT4P33201 236 aaKnown RBP6.28□□□□□ -1.4
PEX4YGR133W ALR1Q08269 859 aa6.28□□□□□ -1.4
PEX4YGR133W YDL206WQ12424 762 aa6.28□□□□□ -1.4
PEX4YGR133W RPA14P50106 137 aa6.27□□□□□ -1.41
PEX4YGR133W FPK1P53739 893 aa6.26□□□□□ -1.41
PEX4YGR133W TBF1Q02457 562 aa6.25□□□□□ -1.41
PEX4YGR133W YPR097WQ06839 1073 aa6.25□□□□□ -1.41
PEX4YGR133W NUP42P49686 430 aaKnown RBP6.23□□□□□ -1.41
PEX4YGR133W PUS6P53294 404 aa6.23□□□□□ -1.41
PEX4YGR133W YMR196WQ04336 1088 aa6.23□□□□□ -1.41
PEX4YGR133W SCJ1P25303 377 aa6.21□□□□□ -1.42
PEX4YGR133W DSF2P38213 736 aa6.21□□□□□ -1.42
PEX4YGR133W TRM1P15565 570 aaKnown RBP6.2□□□□□ -1.42
PEX4YGR133W AAD14P42884 376 aa6.2□□□□□ -1.42
PEX4YGR133W LSC2P53312 427 aa6.2□□□□□ -1.42
PEX4YGR133W ICP55P40051 511 aa6.19□□□□□ -1.42
PEX4YGR133W ARG82P07250 355 aa6.18□□□□□ -1.42
PEX4YGR133W DLD1P32891 587 aa6.18□□□□□ -1.42
PEX4YGR133W RTT106P40161 455 aa6.18□□□□□ -1.42
PEX4YGR133W UBP2Q01476 1272 aa6.18□□□□□ -1.42
PEX4YGR133W YPR204WQ08995 1032 aa6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms