RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B STR2P47164 639 aa2.97□□□□□ -1.93
YGR109W-BYGR109W-B YNL115CP53925 644 aa2.97□□□□□ -1.93
YGR109W-BYGR109W-B GCR2Q01722 534 aa2.97□□□□□ -1.93
YGR109W-BYGR109W-B SIT4P20604 311 aa2.96□□□□□ -1.94
YGR109W-BYGR109W-B TPD3P31383 635 aa2.96□□□□□ -1.94
YGR109W-BYGR109W-B NUP42P49686 430 aaKnown RBP2.96□□□□□ -1.94
YGR109W-BYGR109W-B AIM7Q12156 149 aa2.95□□□□□ -1.94
YGR109W-BYGR109W-B KXD1P53158 218 aa2.95□□□□□ -1.94
YGR109W-BYGR109W-B ATF2P53296 535 aa2.94□□□□□ -1.94
YGR109W-BYGR109W-B CDC4P07834 779 aa2.94□□□□□ -1.94
YGR109W-BYGR109W-B BUB1P41695 1021 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
YGR109W-BYGR109W-B YMR196WQ04336 1088 aa2.94□□□□□ -1.94
YGR109W-BYGR109W-B HED1Q03937 162 aa2.94□□□□□ -1.94
YGR109W-BYGR109W-B LEU3P08638 886 aa2.93□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-DR4O74302 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-HP0C2I4 478 aaKnown RBP2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-AP0CX57 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-PR1P0CX58 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-ORP0CX59 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-PR2P0CX60 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-DR5P0CX65 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-ER2P0CX66 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-GR3P0CX67 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-LR1P0CX68 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-MR2P0CX69 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B RRN7P40992 514 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-JR2P47099 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B HST2P53686 357 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-DR1Q03856 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-ML1Q04706 440 aaKnown RBP2.92□□□□□ -1.94
YGR109W-BYGR109W-B LAM6Q08001 693 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-BRQ12217 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-NL2Q12470 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B TY1A-GR2Q12485 440 aa2.92□□□□□ -1.94
YGR109W-BYGR109W-B RAS1P01119 309 aa2.91□□□□□ -1.94
YGR109W-BYGR109W-B TBF1Q02457 562 aa2.91□□□□□ -1.94
YGR109W-BYGR109W-B SDH2P21801 266 aa2.91□□□□□ -1.94
YGR109W-BYGR109W-B BRE2P43132 505 aa2.91□□□□□ -1.94
YGR109W-BYGR109W-B PUS6P53294 404 aa2.91□□□□□ -1.94
YGR109W-BYGR109W-B SRC1Q03707 834 aa2.91□□□□□ -1.94
YGR109W-BYGR109W-B KEX2P13134 814 aa2.91□□□□□ -1.94
YGR109W-BYGR109W-B RPA14P50106 137 aa2.9□□□□□ -1.94
YGR109W-BYGR109W-B GLN1P32288 370 aaKnown RBP2.9□□□□□ -1.95
YGR109W-BYGR109W-B ALR1Q08269 859 aa2.9□□□□□ -1.95
YGR109W-BYGR109W-B SEC2P17065 759 aa2.9□□□□□ -1.95
YGR109W-BYGR109W-B RPN1P38764 993 aaKnown RBP2.89□□□□□ -1.95
YGR109W-BYGR109W-B DIT2P21595 489 aa2.89□□□□□ -1.95
YGR109W-BYGR109W-B MMP1Q12372 583 aa2.89□□□□□ -1.95
YGR109W-BYGR109W-B SSA2P10592 639 aaKnown RBP2.89□□□□□ -1.95
YGR109W-BYGR109W-B HST3P53687 447 aa2.89□□□□□ -1.95
YGR109W-BYGR109W-B FPK1P53739 893 aa2.89□□□□□ -1.95
YGR109W-BYGR109W-B SYH1Q02875 849 aaKnown RBP2.89□□□□□ -1.95
YGR109W-BYGR109W-B MOD5P07884 428 aa2.88□□□□□ -1.95
YGR109W-BYGR109W-B BDP1P46678 594 aa2.88□□□□□ -1.95
YGR109W-BYGR109W-B AFT1P22149 690 aa2.88□□□□□ -1.95
YGR109W-BYGR109W-B RRD1P40454 393 aaKnown RBP2.88□□□□□ -1.95
YGR109W-BYGR109W-B TUB4P53378 473 aa2.88□□□□□ -1.95
YGR109W-BYGR109W-B NIS1P53939 407 aa2.88□□□□□ -1.95
YGR109W-BYGR109W-B FRK1Q03002 865 aaPredicted RBP2.88□□□□□ -1.95
YGR109W-BYGR109W-B YPR097WQ06839 1073 aa2.88□□□□□ -1.95
YGR109W-BYGR109W-B SLY41P22215 453 aa2.88□□□□□ -1.95
YGR109W-BYGR109W-B CST6P40535 587 aa2.88□□□□□ -1.95
YGR109W-BYGR109W-B HXT10P43581 546 aa2.88□□□□□ -1.95
YGR109W-BYGR109W-B AGE1Q04412 482 aa2.87□□□□□ -1.95
YGR109W-BYGR109W-B HGH1P48362 394 aaKnown RBP2.86□□□□□ -1.95
YGR109W-BYGR109W-B MSB3P48566 633 aaPredicted RBP2.86□□□□□ -1.95
YGR109W-BYGR109W-B PAC1P39946 494 aaKnown RBP2.86□□□□□ -1.95
YGR109W-BYGR109W-B RPP2BP02400 110 aaKnown RBP2.85□□□□□ -1.95
YGR109W-BYGR109W-B PDC1P06169 563 aaKnown RBP2.85□□□□□ -1.95
YGR109W-BYGR109W-B YLR346CQ06139 101 aa2.85□□□□□ -1.95
YGR109W-BYGR109W-B ERF2Q06551 359 aa2.85□□□□□ -1.95
YGR109W-BYGR109W-B ENV9Q08651 330 aa2.85□□□□□ -1.95
YGR109W-BYGR109W-B GBP2P25555 427 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
YGR109W-BYGR109W-B SPT5P27692 1063 aaKnown RBP2.84□□□□□ -1.95
YGR109W-BYGR109W-B GLC3P32775 704 aa2.84□□□□□ -1.95
YGR109W-BYGR109W-B MRT4P33201 236 aaKnown RBP2.84□□□□□ -1.95
YGR109W-BYGR109W-B TRM1P15565 570 aaKnown RBP2.84□□□□□ -1.96
YGR109W-BYGR109W-B KIP2P28743 706 aa2.84□□□□□ -1.96
YGR109W-BYGR109W-B IXR1P33417 597 aa2.83□□□□□ -1.96
YGR109W-BYGR109W-B CSE4P36012 229 aa2.83□□□□□ -1.96
YGR109W-BYGR109W-B CSN12P47130 423 aa2.83□□□□□ -1.96
YGR109W-BYGR109W-B NAF1P53919 492 aaKnown RBP2.83□□□□□ -1.96
YGR109W-BYGR109W-B ASH1P34233 588 aa2.83□□□□□ -1.96
YGR109W-BYGR109W-B YDL206WQ12424 762 aa2.83□□□□□ -1.96
YGR109W-BYGR109W-B MRX12P47084 519 aa2.83□□□□□ -1.96
YGR109W-BYGR109W-B HPC2Q01448 625 aa2.82□□□□□ -1.96
YGR109W-BYGR109W-B SRF1Q12516 437 aa2.82□□□□□ -1.96
YGR109W-BYGR109W-B ARG82P07250 355 aa2.81□□□□□ -1.96
YGR109W-BYGR109W-B KIN1P13185 1064 aa2.81□□□□□ -1.96
YGR109W-BYGR109W-B RGA1P39083 1007 aa2.81□□□□□ -1.96
YGR109W-BYGR109W-B UGA3P26370 528 aa2.81□□□□□ -1.96
YGR109W-BYGR109W-B VAC17P25591 423 aa2.81□□□□□ -1.96
YGR109W-BYGR109W-B ATG3P40344 310 aa2.81□□□□□ -1.96
YGR109W-BYGR109W-B YPL062WQ02781 134 aa2.81□□□□□ -1.96
YGR109W-BYGR109W-B LCB5Q06147 687 aaKnown RBP2.81□□□□□ -1.96
YGR109W-BYGR109W-B MET32Q12041 191 aa2.81□□□□□ -1.96
YGR109W-BYGR109W-B NUP85P46673 744 aa2.81□□□□□ -1.96
YGR109W-BYGR109W-B PKH3Q03306 898 aaPredicted RBP2.81□□□□□ -1.96
YGR109W-BYGR109W-B RSC30P38781 883 aa2.8□□□□□ -1.96
YGR109W-BYGR109W-B GLY1P37303 387 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms