RNA–Protein interactions for RNA: YGL221C

NIF3, Transcript of Protein of unknown function, yeastyeast

Gene NIF3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIF3YGL221C SPE2P21182 396 aa11.95□□□□□ -0.5
NIF3YGL221C YIL055CP40523 627 aaKnown RBP11.94□□□□□ -0.5
NIF3YGL221C GLN1P32288 370 aaKnown RBP11.93□□□□□ -0.5
NIF3YGL221C ENV9Q08651 330 aa11.93□□□□□ -0.5
NIF3YGL221C PRP45P28004 379 aaPredicted RBP11.9□□□□□ -0.5
NIF3YGL221C CHZ1P40019 153 aaPredicted RBP11.84□□□□□ -0.51
NIF3YGL221C PSK1P31374 1356 aa11.83□□□□□ -0.52
NIF3YGL221C IMH1Q06704 911 aaKnown RBP11.83□□□□□ -0.52
NIF3YGL221C PRP5P21372 849 aaPredicted RBP11.82□□□□□ -0.52
NIF3YGL221C YLR419WQ06698 1435 aaKnown RBP11.82□□□□□ -0.52
NIF3YGL221C RRP5Q05022 1729 aaKnown RBP11.82□□□□□ -0.52
NIF3YGL221C ADE6P38972 1358 aaKnown RBP11.79□□□□□ -0.52
NIF3YGL221C MSB3P48566 633 aaPredicted RBP11.78□□□□□ -0.52
NIF3YGL221C CSE4P36012 229 aa11.77□□□□□ -0.53
NIF3YGL221C TY4B-HP0C2J7 1802 aa11.76□□□□□ -0.53
NIF3YGL221C TY4B-JP47024 1803 aa11.76□□□□□ -0.53
NIF3YGL221C RPS24AP0CX31 135 aaKnown RBP11.76□□□□□ -0.53
NIF3YGL221C RPS24BP0CX32 135 aaKnown RBP11.76□□□□□ -0.53
NIF3YGL221C YMR074CQ04773 145 aa11.76□□□□□ -0.53
NIF3YGL221C LEU2P04173 364 aaPredicted RBP11.74□□□□□ -0.53
NIF3YGL221C YML133CQ03099 1374 aa11.73□□□□□ -0.53
NIF3YGL221C YLL067CQ07888 1374 aa11.73□□□□□ -0.53
NIF3YGL221C YLL066CQ99208 1374 aa11.73□□□□□ -0.53
NIF3YGL221C MTR4P47047 1073 aaKnown RBP11.7□□□□□ -0.54
NIF3YGL221C PRP43P53131 767 aaKnown RBP11.7□□□□□ -0.54
NIF3YGL221C LEU3P08638 886 aa11.68□□□□□ -0.54
NIF3YGL221C IES2P40154 320 aa11.68□□□□□ -0.54
NIF3YGL221C SLM3Q12093 417 aa11.68□□□□□ -0.54
NIF3YGL221C TCB1Q12466 1186 aa11.67□□□□□ -0.54
NIF3YGL221C YRF1-2P40105 1681 aa11.66□□□□□ -0.54
NIF3YGL221C RTG3P38165 486 aa11.66□□□□□ -0.54
NIF3YGL221C FKH1P40466 484 aa11.65□□□□□ -0.54
NIF3YGL221C BUD31P25337 157 aaPredicted RBP11.64□□□□□ -0.55
NIF3YGL221C DOT5P40553 215 aa11.64□□□□□ -0.55
NIF3YGL221C GAS4Q08271 471 aa11.62□□□□□ -0.55
NIF3YGL221C PRI1P10363 409 aa11.61□□□□□ -0.55
NIF3YGL221C XKS1P42826 600 aa11.61□□□□□ -0.55
NIF3YGL221C RPN11P43588 306 aaKnown RBP11.61□□□□□ -0.55
NIF3YGL221C RSF2P46974 1380 aa11.61□□□□□ -0.55
NIF3YGL221C FOX2Q02207 900 aaKnown RBP11.59□□□□□ -0.55
NIF3YGL221C DPS1P04802 557 aaKnown RBP11.58□□□□□ -0.56
NIF3YGL221C POL5P39985 1022 aaKnown RBP11.58□□□□□ -0.56
NIF3YGL221C URB1P34241 1764 aaKnown RBP11.58□□□□□ -0.56
NIF3YGL221C YIL177CP40434 1758 aa11.56□□□□□ -0.56
NIF3YGL221C YJL225CP40889 1758 aa11.56□□□□□ -0.56
NIF3YGL221C SCT1P32784 759 aa11.55□□□□□ -0.56
NIF3YGL221C YKL133CP36066 463 aa11.55□□□□□ -0.56
NIF3YGL221C ENP1P38333 483 aaKnown RBP11.55□□□□□ -0.56
NIF3YGL221C PDS5Q04264 1277 aa11.55□□□□□ -0.56
NIF3YGL221C HIM1Q06674 414 aa11.54□□□□□ -0.56
NIF3YGL221C PDI1P17967 522 aaKnown RBP11.53□□□□□ -0.56
NIF3YGL221C NPR2P39923 615 aa11.52□□□□□ -0.57
NIF3YGL221C RTF1P53064 558 aa11.52□□□□□ -0.57
NIF3YGL221C AUS1Q08409 1394 aa11.52□□□□□ -0.57
NIF3YGL221C COBP00163 385 aa11.51□□□□□ -0.57
NIF3YGL221C MHP1P43638 1398 aa11.51□□□□□ -0.57
NIF3YGL221C ROM2P51862 1356 aaKnown RBP11.51□□□□□ -0.57
NIF3YGL221C YRF1-3P0CX14 1859 aa11.51□□□□□ -0.57
NIF3YGL221C YRF1-7P0CX15 1859 aa11.51□□□□□ -0.57
NIF3YGL221C YRF1-6P53819 1859 aa11.51□□□□□ -0.57
NIF3YGL221C FKS3Q04952 1785 aa11.5□□□□□ -0.57
NIF3YGL221C UBP1P25037 809 aa11.5□□□□□ -0.57
NIF3YGL221C LYS4P49367 693 aaPredicted RBP11.5□□□□□ -0.57
NIF3YGL221C RCR1P38212 213 aa11.49□□□□□ -0.57
NIF3YGL221C NST1P53935 1240 aa11.49□□□□□ -0.57
NIF3YGL221C YRF1-4O13559 1382 aa11.49□□□□□ -0.57
NIF3YGL221C MLP1Q02455 1875 aaKnown RBP11.47□□□□□ -0.57
NIF3YGL221C YKR075CP36155 307 aa11.47□□□□□ -0.57
NIF3YGL221C YJL181WP46987 611 aa11.47□□□□□ -0.57
NIF3YGL221C APC1P53886 1748 aa11.46□□□□□ -0.57
NIF3YGL221C FRK1Q03002 865 aaPredicted RBP11.46□□□□□ -0.57
NIF3YGL221C TAP42Q04372 366 aa11.46□□□□□ -0.57
NIF3YGL221C YEF3P16521 1044 aaKnown RBP11.45□□□□□ -0.58
NIF3YGL221C YBL086CP38177 466 aa11.45□□□□□ -0.58
NIF3YGL221C ADE16P54113 591 aaKnown RBP11.44□□□□□ -0.58
NIF3YGL221C LAM6Q08001 693 aa11.44□□□□□ -0.58
NIF3YGL221C SEC3P33332 1336 aaKnown RBP11.42□□□□□ -0.58
NIF3YGL221C GRX4P32642 244 aa11.42□□□□□ -0.58
NIF3YGL221C PRP40P33203 583 aaKnown RBP11.42□□□□□ -0.58
NIF3YGL221C BUB1P41695 1021 aaKnown RBP RIP-Chip data11.42□□□□□ -0.58not detected
NIF3YGL221C TRK1P12685 1235 aa11.41□□□□□ -0.58
NIF3YGL221C KAR2P16474 682 aaKnown RBP11.4□□□□□ -0.58
NIF3YGL221C CTH1P47976 325 aa11.39□□□□□ -0.59
NIF3YGL221C MEC3Q02574 474 aa11.39□□□□□ -0.59
NIF3YGL221C SIR4P11978 1358 aa11.39□□□□□ -0.59
NIF3YGL221C PSD2P53037 1138 aaKnown RBP11.37□□□□□ -0.59
NIF3YGL221C PAP2P53632 584 aaKnown RBP11.36□□□□□ -0.59
NIF3YGL221C RPO41P13433 1351 aaKnown RBP11.36□□□□□ -0.59
NIF3YGL221C SSA2P10592 639 aaKnown RBP11.35□□□□□ -0.59
NIF3YGL221C ATG13Q06628 738 aa11.34□□□□□ -0.59
NIF3YGL221C INP54Q08227 384 aaKnown RBP11.34□□□□□ -0.59
NIF3YGL221C OSM1P21375 501 aaKnown RBP11.33□□□□□ -0.6
NIF3YGL221C UGA2P38067 497 aa11.33□□□□□ -0.6
NIF3YGL221C ALD2P47771 506 aa11.33□□□□□ -0.6
NIF3YGL221C EDE1P34216 1381 aa11.32□□□□□ -0.6
NIF3YGL221C DSD1P53095 428 aa11.32□□□□□ -0.6
NIF3YGL221C HSP104P31539 908 aaKnown RBP11.31□□□□□ -0.6
NIF3YGL221C SNF2P22082 1703 aa11.3□□□□□ -0.6
NIF3YGL221C GTT3P39996 337 aa11.29□□□□□ -0.6
NIF3YGL221C AKL1P38080 1108 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms