RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W GYP5Q12344 894 aa8.07□□□□□ -1.12
RPN12YFR052W PDR15Q04182 1529 aaKnown RBP8.04□□□□□ -1.12
RPN12YFR052W TFG1P41895 735 aaPredicted RBP8.03□□□□□ -1.12
RPN12YFR052W SAP30P38429 201 aa8.02□□□□□ -1.13
RPN12YFR052W YDL129WQ07555 291 aa8.02□□□□□ -1.13
RPN12YFR052W SNT2P53127 1403 aa8.02□□□□□ -1.13
RPN12YFR052W DOP1Q03921 1698 aa8.02□□□□□ -1.13
RPN12YFR052W HTA1P04911 132 aaKnown RBP8.01□□□□□ -1.13
RPN12YFR052W HTA2P04912 132 aa8.01□□□□□ -1.13
RPN12YFR052W DCW1P36091 449 aa8□□□□□ -1.13
RPN12YFR052W NUP170P38181 1502 aa7.99□□□□□ -1.13
RPN12YFR052W PTC4P38089 393 aa7.99□□□□□ -1.13
RPN12YFR052W ITT1Q04638 464 aa7.99□□□□□ -1.13
RPN12YFR052W IRC20Q06554 1556 aa7.97□□□□□ -1.13
RPN12YFR052W CHL1P22516 861 aaPredicted RBP7.97□□□□□ -1.13
RPN12YFR052W YEL023CP39992 682 aa7.97□□□□□ -1.13
RPN12YFR052W STH1P32597 1359 aa7.97□□□□□ -1.13
RPN12YFR052W GDB1Q06625 1536 aa7.96□□□□□ -1.14
RPN12YFR052W DNF2Q12675 1612 aa7.96□□□□□ -1.14
RPN12YFR052W YBT1P32386 1661 aa7.95□□□□□ -1.14
RPN12YFR052W BCK2P33306 851 aa7.95□□□□□ -1.14
RPN12YFR052W SAS10Q12136 610 aaPredicted RBP7.95□□□□□ -1.14
RPN12YFR052W DRS2P39524 1355 aa7.95□□□□□ -1.14
RPN12YFR052W MMS1Q06211 1407 aa7.95□□□□□ -1.14
RPN12YFR052W PDR12Q02785 1511 aa7.94□□□□□ -1.14
RPN12YFR052W PRE3P38624 215 aa7.94□□□□□ -1.14
RPN12YFR052W RTT106P40161 455 aa7.9□□□□□ -1.14
RPN12YFR052W CHC1P22137 1653 aaKnown RBP7.89□□□□□ -1.15
RPN12YFR052W MET10P39692 1035 aa7.88□□□□□ -1.15
RPN12YFR052W YDR344CQ05510 147 aa7.88□□□□□ -1.15
RPN12YFR052W GRE2Q12068 342 aaKnown RBP7.88□□□□□ -1.15
RPN12YFR052W TY3B-GQ99315 1547 aa7.88□□□□□ -1.15
RPN12YFR052W BUD3P25558 1636 aa7.87□□□□□ -1.15
RPN12YFR052W PDR10P51533 1564 aa7.87□□□□□ -1.15
RPN12YFR052W RAM2P29703 316 aa7.86□□□□□ -1.15
RPN12YFR052W EDS1P38073 919 aa7.86□□□□□ -1.15
RPN12YFR052W NUP157P40064 1391 aaKnown RBP7.85□□□□□ -1.15
RPN12YFR052W MAK11P20484 414 aaKnown RBP7.85□□□□□ -1.15
RPN12YFR052W NST1P53935 1240 aa7.85□□□□□ -1.15
RPN12YFR052W IQG1Q12280 1495 aa7.85□□□□□ -1.15
RPN12YFR052W IFH1P39520 1085 aa7.84□□□□□ -1.15
RPN12YFR052W PTC3P34221 468 aaKnown RBP7.83□□□□□ -1.16
RPN12YFR052W GEA1P47102 1408 aaPredicted RBP7.82□□□□□ -1.16
RPN12YFR052W PML39Q03760 334 aa7.82□□□□□ -1.16
RPN12YFR052W GUT1P32190 709 aa7.81□□□□□ -1.16
RPN12YFR052W MIF2P35201 549 aa7.81□□□□□ -1.16
RPN12YFR052W ARO1P08566 1588 aaKnown RBP7.8□□□□□ -1.16
RPN12YFR052W SEC7P11075 2009 aaKnown RBP7.8□□□□□ -1.16
RPN12YFR052W ATH1P48016 1211 aa7.78□□□□□ -1.16
RPN12YFR052W TAF7Q05021 590 aa7.78□□□□□ -1.16
RPN12YFR052W TRM3Q07527 1436 aa7.78□□□□□ -1.16
RPN12YFR052W SOL3P38858 249 aa7.77□□□□□ -1.17
RPN12YFR052W XDJ1P39102 459 aa7.77□□□□□ -1.17
RPN12YFR052W YOR093CQ12275 1648 aa7.76□□□□□ -1.17
RPN12YFR052W VRP1P37370 817 aa7.75□□□□□ -1.17
RPN12YFR052W COQ8P27697 501 aa7.74□□□□□ -1.17
RPN12YFR052W ARH1P48360 493 aa7.74□□□□□ -1.17
RPN12YFR052W CAT8P39113 1433 aa7.74□□□□□ -1.17
RPN12YFR052W ELP4Q02884 456 aaKnown RBP7.73□□□□□ -1.17
RPN12YFR052W MID1P41821 548 aa7.72□□□□□ -1.17
RPN12YFR052W DNF3Q12674 1656 aa7.7□□□□□ -1.18
RPN12YFR052W MPH3P0CE00 602 aa7.7□□□□□ -1.18
RPN12YFR052W AI4P03878 556 aa7.69□□□□□ -1.18
RPN12YFR052W ILV3P39522 585 aaKnown RBP7.69□□□□□ -1.18
RPN12YFR052W CKB1P43639 278 aa7.67□□□□□ -1.18
RPN12YFR052W YSP2Q06681 1438 aa7.67□□□□□ -1.18
RPN12YFR052W USO1P25386 1790 aa7.65□□□□□ -1.18
RPN12YFR052W NOP53Q12080 455 aaKnown RBP7.64□□□□□ -1.19
RPN12YFR052W BNR1P40450 1375 aa7.62□□□□□ -1.19
RPN12YFR052W SPT23P35210 1082 aa7.62□□□□□ -1.19
RPN12YFR052W YGR273CP53329 174 aa7.6□□□□□ -1.19
RPN12YFR052W HAP5Q02516 242 aa7.59□□□□□ -1.19
RPN12YFR052W PEX29Q03370 554 aa7.59□□□□□ -1.19
RPN12YFR052W NUP188P52593 1655 aaKnown RBP7.58□□□□□ -1.2
RPN12YFR052W DPS1P04802 557 aaKnown RBP7.58□□□□□ -1.2
RPN12YFR052W BNI4P53858 892 aa7.58□□□□□ -1.2
RPN12YFR052W SRB8P25648 1427 aa7.58□□□□□ -1.2
RPN12YFR052W VMR1P38735 1592 aa7.56□□□□□ -1.2
RPN12YFR052W MPC54Q08550 464 aa7.56□□□□□ -1.2
RPN12YFR052W YML082WQ04533 649 aaKnown RBP7.55□□□□□ -1.2
RPN12YFR052W IML1P47170 1584 aa7.53□□□□□ -1.2
RPN12YFR052W SLI15P38283 698 aa7.5□□□□□ -1.21
RPN12YFR052W SRC1Q03707 834 aa7.5□□□□□ -1.21
RPN12YFR052W GCN2P15442 1659 aa7.5□□□□□ -1.21
RPN12YFR052W PTC2P39966 464 aaKnown RBP7.49□□□□□ -1.21
RPN12YFR052W YAP3P38749 330 aa7.48□□□□□ -1.21
RPN12YFR052W NMA111P53920 997 aa7.48□□□□□ -1.21
RPN12YFR052W IKI3Q06706 1349 aaKnown RBP7.48□□□□□ -1.21
RPN12YFR052W BUD21Q08492 214 aaPredicted RBP7.47□□□□□ -1.21
RPN12YFR052W SSM4P40318 1319 aa7.47□□□□□ -1.21
RPN12YFR052W DPL1Q05567 589 aa7.45□□□□□ -1.22
RPN12YFR052W PDR5P33302 1511 aaKnown RBP7.43□□□□□ -1.22
RPN12YFR052W YPR015CQ12531 247 aa7.43□□□□□ -1.22
RPN12YFR052W KEX1P09620 729 aa7.41□□□□□ -1.22
RPN12YFR052W RAM1P22007 431 aa7.41□□□□□ -1.22
RPN12YFR052W TYS1P36421 394 aaKnown RBP7.4□□□□□ -1.22
RPN12YFR052W MAK10Q02197 733 aa7.4□□□□□ -1.22
RPN12YFR052W TY1B-NL2Q99337 1749 aaKnown RBP7.4□□□□□ -1.23
RPN12YFR052W URN1Q06525 465 aaKnown RBP7.39□□□□□ -1.23
RPN12YFR052W IPL1P38991 367 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms