RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C MLP1Q02455 1875 aaKnown RBP8.37□□□□□ -1.07
YPT1YFL038C YEF3P16521 1044 aaKnown RBP8.34□□□□□ -1.07
YPT1YFL038C YML133CQ03099 1374 aa8.33□□□□□ -1.08
YPT1YFL038C YLL067CQ07888 1374 aa8.33□□□□□ -1.08
YPT1YFL038C YLL066CQ99208 1374 aa8.33□□□□□ -1.08
YPT1YFL038C TRK1P12685 1235 aa8.32□□□□□ -1.08
YPT1YFL038C YRB30P53107 440 aaPredicted RBP8.32□□□□□ -1.08
YPT1YFL038C MRX12P47084 519 aa8.31□□□□□ -1.08
YPT1YFL038C YDL144CQ07589 356 aa8.31□□□□□ -1.08
YPT1YFL038C RVB2Q12464 471 aaKnown RBP8.31□□□□□ -1.08
YPT1YFL038C PSK1P31374 1356 aa8.3□□□□□ -1.08
YPT1YFL038C CFT1Q06632 1357 aaKnown RBP8.3□□□□□ -1.08
YPT1YFL038C KRE5P22023 1365 aa8.28□□□□□ -1.08
YPT1YFL038C RIA1P53893 1110 aa8.26□□□□□ -1.09
YPT1YFL038C TAP42Q04372 366 aa8.26□□□□□ -1.09
YPT1YFL038C DNF3Q12674 1656 aa8.26□□□□□ -1.09
YPT1YFL038C SUI2P20459 304 aaKnown RBP8.25□□□□□ -1.09
YPT1YFL038C PPH3P32345 308 aa8.25□□□□□ -1.09
YPT1YFL038C RCM1P53972 490 aa8.25□□□□□ -1.09
YPT1YFL038C MPP10P47083 593 aaKnown RBP8.24□□□□□ -1.09
YPT1YFL038C RRP46P53256 223 aaPredicted RBP8.24□□□□□ -1.09
YPT1YFL038C LEU2P04173 364 aaPredicted RBP8.23□□□□□ -1.09
YPT1YFL038C FPR3P38911 411 aaKnown RBP8.23□□□□□ -1.09
YPT1YFL038C FUN12P39730 1002 aaKnown RBP8.23□□□□□ -1.09
YPT1YFL038C MAK10Q02197 733 aa8.23□□□□□ -1.09
YPT1YFL038C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
YPT1YFL038C SNF2P22082 1703 aa8.23□□□□□ -1.09
YPT1YFL038C KAR2P16474 682 aaKnown RBP8.22□□□□□ -1.09
YPT1YFL038C CPS1P27614 576 aa8.22□□□□□ -1.09
YPT1YFL038C RTR1P40084 226 aaPredicted RBP8.22□□□□□ -1.09
YPT1YFL038C PDI1P17967 522 aaKnown RBP8.21□□□□□ -1.1
YPT1YFL038C GRX4P32642 244 aa8.21□□□□□ -1.1
YPT1YFL038C MTR4P47047 1073 aaKnown RBP8.21□□□□□ -1.1
YPT1YFL038C YNR029CP53729 429 aaKnown RBP8.2□□□□□ -1.1
YPT1YFL038C SAP155P43612 1002 aa8.19□□□□□ -1.1
YPT1YFL038C RPC31P17890 251 aa8.18□□□□□ -1.1
YPT1YFL038C PRD1P25375 712 aa8.18□□□□□ -1.1
YPT1YFL038C RTF1P53064 558 aa8.18□□□□□ -1.1
YPT1YFL038C AUS1Q08409 1394 aa8.18□□□□□ -1.1
YPT1YFL038C PRP43P53131 767 aaKnown RBP8.17□□□□□ -1.1
YPT1YFL038C HIM1Q06674 414 aa8.17□□□□□ -1.1
YPT1YFL038C THI22Q06490 572 aa8.16□□□□□ -1.1
YPT1YFL038C RAD2P07276 1031 aa8.15□□□□□ -1.1
YPT1YFL038C HEF3P53978 1044 aaKnown RBP8.15□□□□□ -1.1
YPT1YFL038C TPD3P31383 635 aa8.14□□□□□ -1.11
YPT1YFL038C PAP2P53632 584 aaKnown RBP8.14□□□□□ -1.11
YPT1YFL038C AAD16Q02895 342 aa8.14□□□□□ -1.11
YPT1YFL038C ADE6P38972 1358 aaKnown RBP8.13□□□□□ -1.11
YPT1YFL038C ABP1P15891 592 aaKnown RBP8.13□□□□□ -1.11
YPT1YFL038C BUD27P43573 796 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
YPT1YFL038C TY1B-NL2Q99337 1749 aaKnown RBP8.12□□□□□ -1.11
YPT1YFL038C SIR4P11978 1358 aa8.12□□□□□ -1.11
YPT1YFL038C RPO41P13433 1351 aaKnown RBP8.12□□□□□ -1.11
YPT1YFL038C YIL092WP40497 633 aa8.12□□□□□ -1.11
YPT1YFL038C RPS24AP0CX31 135 aaKnown RBP8.1□□□□□ -1.11
YPT1YFL038C RPS24BP0CX32 135 aaKnown RBP8.1□□□□□ -1.11
YPT1YFL038C CSE4P36012 229 aa8.1□□□□□ -1.11
YPT1YFL038C RTT109Q07794 436 aa8.1□□□□□ -1.11
YPT1YFL038C YRF1-4O13559 1382 aa8.1□□□□□ -1.11
YPT1YFL038C PRI1P10363 409 aa8.09□□□□□ -1.11
YPT1YFL038C YIR014WP40570 242 aa8.09□□□□□ -1.11
YPT1YFL038C MAK21Q12176 1025 aaKnown RBP8.09□□□□□ -1.11
YPT1YFL038C OPY1P38271 328 aa8.08□□□□□ -1.12
YPT1YFL038C GAS4Q08271 471 aa8.08□□□□□ -1.12
YPT1YFL038C USO1P25386 1790 aa8.07□□□□□ -1.12
YPT1YFL038C DAL5P15365 543 aa8.07□□□□□ -1.12
YPT1YFL038C IME2P32581 645 aa8.07□□□□□ -1.12
YPT1YFL038C POL32P47110 350 aa8.07□□□□□ -1.12
YPT1YFL038C YMR196WQ04336 1088 aa8.07□□□□□ -1.12
YPT1YFL038C DPS1P04802 557 aaKnown RBP8.06□□□□□ -1.12
YPT1YFL038C AKL1P38080 1108 aaKnown RBP8.06□□□□□ -1.12
YPT1YFL038C APC1P53886 1748 aa8.06□□□□□ -1.12
YPT1YFL038C YNL050CP53952 270 aa8.04□□□□□ -1.12
YPT1YFL038C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
YPT1YFL038C YCK3P39962 524 aa8.02□□□□□ -1.13
YPT1YFL038C MAM1P40065 302 aa8.02□□□□□ -1.13
YPT1YFL038C YFR016CP43597 1233 aaKnown RBP8.02□□□□□ -1.13
YPT1YFL038C GYP7P48365 746 aa8.02□□□□□ -1.13
YPT1YFL038C DSD1P53095 428 aa8.02□□□□□ -1.13
YPT1YFL038C NTH2P35172 780 aa8.01□□□□□ -1.13
YPT1YFL038C ZDS1P50111 915 aaKnown RBP8.01□□□□□ -1.13
YPT1YFL038C PUF6Q04373 656 aaKnown RBP8□□□□□ -1.13
YPT1YFL038C YRF1-2P40105 1681 aa7.98□□□□□ -1.13
YPT1YFL038C EDE1P34216 1381 aa7.98□□□□□ -1.13
YPT1YFL038C RRT14P40470 206 aa7.98□□□□□ -1.13
YPT1YFL038C CTF4Q01454 927 aa7.98□□□□□ -1.13
YPT1YFL038C THI12P42883 340 aa7.97□□□□□ -1.13
YPT1YFL038C THI5P43534 340 aa7.97□□□□□ -1.13
YPT1YFL038C THI11P47183 340 aa7.97□□□□□ -1.13
YPT1YFL038C SRT1Q03175 343 aa7.97□□□□□ -1.13
YPT1YFL038C THI13Q07748 340 aa7.97□□□□□ -1.13
YPT1YFL038C TRP5P00931 707 aaKnown RBP7.96□□□□□ -1.14
YPT1YFL038C EAF7P53911 425 aaKnown RBP7.96□□□□□ -1.14
YPT1YFL038C ECM16Q04217 1267 aaKnown RBP7.96□□□□□ -1.14
YPT1YFL038C TY4B-HP0C2J7 1802 aa7.96□□□□□ -1.14
YPT1YFL038C TY4B-JP47024 1803 aa7.96□□□□□ -1.14
YPT1YFL038C YPP1P46951 817 aa7.95□□□□□ -1.14
YPT1YFL038C HAA1Q12753 694 aaKnown RBP7.95□□□□□ -1.14
YPT1YFL038C CLC1P17891 233 aa7.94□□□□□ -1.14
YPT1YFL038C HSP104P31539 908 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms