RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W YBL036CP38197 257 aa11.66□□□□□ -0.54
LCP5YER127W NPL4P33755 580 aa11.65□□□□□ -0.54
LCP5YER127W BIM1P40013 344 aa11.65□□□□□ -0.54
LCP5YER127W ARH1P48360 493 aa11.65□□□□□ -0.54
LCP5YER127W YNL115CP53925 644 aa11.65□□□□□ -0.54
LCP5YER127W RAD59Q12223 238 aa11.65□□□□□ -0.54
LCP5YER127W ARG8P18544 423 aa11.64□□□□□ -0.55
LCP5YER127W AIR2Q12476 344 aaKnown RBP11.64□□□□□ -0.55
LCP5YER127W KEX2P13134 814 aa11.63□□□□□ -0.55
LCP5YER127W ELP4Q02884 456 aaKnown RBP11.63□□□□□ -0.55
LCP5YER127W YDR344CQ05510 147 aa11.62□□□□□ -0.55
LCP5YER127W RTF1P53064 558 aa11.6□□□□□ -0.55
LCP5YER127W ERF2Q06551 359 aa11.59□□□□□ -0.55
LCP5YER127W SIS1P25294 352 aaKnown RBP11.58□□□□□ -0.56
LCP5YER127W ATG32P40458 529 aa11.58□□□□□ -0.56
LCP5YER127W RPL34BP40525 121 aaKnown RBP11.56□□□□□ -0.56
LCP5YER127W ISM1P48526 1002 aa11.56□□□□□ -0.56
LCP5YER127W YJL171CP46992 396 aa11.55□□□□□ -0.56
LCP5YER127W GCD11P32481 527 aaKnown RBP11.54□□□□□ -0.56
LCP5YER127W CSE4P36012 229 aa11.54□□□□□ -0.56
LCP5YER127W BNI4P53858 892 aa11.54□□□□□ -0.56
LCP5YER127W SPT23P35210 1082 aa11.53□□□□□ -0.56
LCP5YER127W STR2P47164 639 aa11.53□□□□□ -0.56
LCP5YER127W LAM6Q08001 693 aa11.53□□□□□ -0.56
LCP5YER127W BMT6Q12291 365 aa11.53□□□□□ -0.56
LCP5YER127W RSC30P38781 883 aa11.51□□□□□ -0.57
LCP5YER127W PUS6P53294 404 aa11.51□□□□□ -0.57
LCP5YER127W TIF1P10081 395 aaKnown RBP11.5□□□□□ -0.57
LCP5YER127W TRM1P15565 570 aaKnown RBP11.5□□□□□ -0.57
LCP5YER127W BIO2P32451 375 aa11.5□□□□□ -0.57
LCP5YER127W PTC2P39966 464 aaKnown RBP11.5□□□□□ -0.57
LCP5YER127W YNL108CP53929 270 aa11.49□□□□□ -0.57
LCP5YER127W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.47□□□□□ -0.57not detected
LCP5YER127W TBF1Q02457 562 aa11.47□□□□□ -0.57
LCP5YER127W RAM1P22007 431 aa11.46□□□□□ -0.57
LCP5YER127W BUD20Q08004 166 aaPredicted RBP11.46□□□□□ -0.57
LCP5YER127W ERG12P07277 443 aa11.45□□□□□ -0.58
LCP5YER127W RTG2P32608 588 aaKnown RBP11.44□□□□□ -0.58
LCP5YER127W PRE3P38624 215 aa11.44□□□□□ -0.58
LCP5YER127W SEC2P17065 759 aa11.42□□□□□ -0.58
LCP5YER127W TUB4P53378 473 aa11.42□□□□□ -0.58
LCP5YER127W YPR204WQ08995 1032 aa11.42□□□□□ -0.58
LCP5YER127W TY1A-DR4O74302 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-HP0C2I4 478 aaKnown RBP11.41□□□□□ -0.58
LCP5YER127W TY1A-AP0CX57 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-PR1P0CX58 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-ORP0CX59 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-PR2P0CX60 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-DR5P0CX65 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-ER2P0CX66 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-GR3P0CX67 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-LR1P0CX68 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-MR2P0CX69 440 aa11.41□□□□□ -0.58
LCP5YER127W MAK16P10962 306 aaPredicted RBP11.41□□□□□ -0.58
LCP5YER127W TY1A-JR2P47099 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-DR1Q03856 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-ML1Q04706 440 aaKnown RBP11.41□□□□□ -0.58
LCP5YER127W TY1A-BRQ12217 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-NL2Q12470 440 aa11.41□□□□□ -0.58
LCP5YER127W TY1A-GR2Q12485 440 aa11.41□□□□□ -0.58
LCP5YER127W YPR015CQ12531 247 aa11.4□□□□□ -0.58
LCP5YER127W YDJ1P25491 409 aaKnown RBP11.39□□□□□ -0.59
LCP5YER127W PRT1P06103 763 aaKnown RBP11.38□□□□□ -0.59
LCP5YER127W YML082WQ04533 649 aaKnown RBP11.38□□□□□ -0.59
LCP5YER127W YDL206WQ12424 762 aa11.38□□□□□ -0.59
LCP5YER127W SUP45P12385 437 aaKnown RBP11.37□□□□□ -0.59
LCP5YER127W CHL1P22516 861 aaPredicted RBP11.37□□□□□ -0.59
LCP5YER127W SPT5P27692 1063 aaKnown RBP11.37□□□□□ -0.59
LCP5YER127W AGE1Q04412 482 aa11.36□□□□□ -0.59
LCP5YER127W ENO2P00925 437 aaKnown RBP11.33□□□□□ -0.6
LCP5YER127W PAT1P25644 796 aaKnown RBP11.33□□□□□ -0.6
LCP5YER127W RRN7P40992 514 aa11.33□□□□□ -0.6
LCP5YER127W SSA4P22202 642 aaKnown RBP11.3□□□□□ -0.6
LCP5YER127W PAC1P39946 494 aaKnown RBP11.3□□□□□ -0.6
LCP5YER127W RPA14P50106 137 aa11.3□□□□□ -0.6
LCP5YER127W CPS1P27614 576 aa11.29□□□□□ -0.6
LCP5YER127W SPT16P32558 1035 aaKnown RBP11.29□□□□□ -0.6
LCP5YER127W SUB2Q07478 446 aaKnown RBP11.29□□□□□ -0.6
LCP5YER127W NAF1P53919 492 aaKnown RBP11.28□□□□□ -0.6
LCP5YER127W ALR1Q08269 859 aa11.28□□□□□ -0.6
LCP5YER127W GYP1Q08484 637 aa11.28□□□□□ -0.6
LCP5YER127W ENO1P00924 437 aaKnown RBP11.27□□□□□ -0.61
LCP5YER127W KXD1P53158 218 aa11.27□□□□□ -0.61
LCP5YER127W TTI1P36097 1038 aa11.26□□□□□ -0.61
LCP5YER127W YPR097WQ06839 1073 aa11.26□□□□□ -0.61
LCP5YER127W PDC1P06169 563 aaKnown RBP11.23□□□□□ -0.61
LCP5YER127W YPP1P46951 817 aa11.23□□□□□ -0.61
LCP5YER127W RIM21P48565 533 aa11.22□□□□□ -0.61
LCP5YER127W ISF1P32488 338 aa11.21□□□□□ -0.61
LCP5YER127W MRX10Q05648 414 aa11.21□□□□□ -0.61
LCP5YER127W MCM16Q12262 181 aa11.21□□□□□ -0.61
LCP5YER127W SAS4Q04003 481 aa11.2□□□□□ -0.62
LCP5YER127W SSA1P10591 642 aaKnown RBP11.19□□□□□ -0.62
LCP5YER127W TEC1P18412 486 aa11.18□□□□□ -0.62
LCP5YER127W HXT10P43581 546 aa11.18□□□□□ -0.62
LCP5YER127W EMP47P43555 445 aa11.17□□□□□ -0.62
LCP5YER127W FIG4P42837 879 aa11.16□□□□□ -0.62
LCP5YER127W ENV9Q08651 330 aa11.15□□□□□ -0.62
LCP5YER127W SIS2P36024 562 aa11.14□□□□□ -0.63
LCP5YER127W VRP1P37370 817 aa11.14□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms