RNA–Protein interactions for RNA: YDR487C

RIB3, Transcript of 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), yeastyeast

Gene RIB3, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIB3YDR487C PRP45P28004 379 aaPredicted RBP13.21□□□□□ -0.29
RIB3YDR487C PPH3P32345 308 aa13.18□□□□□ -0.3
RIB3YDR487C IMH1Q06704 911 aaKnown RBP13.18□□□□□ -0.3
RIB3YDR487C SPE2P21182 396 aa13.15□□□□□ -0.3
RIB3YDR487C KIP3P53086 805 aaKnown RBP13.15□□□□□ -0.3
RIB3YDR487C YMR074CQ04773 145 aa13.15□□□□□ -0.3
RIB3YDR487C PRP5P21372 849 aaPredicted RBP13.11□□□□□ -0.31
RIB3YDR487C ORC1P54784 914 aaPredicted RBP13.09□□□□□ -0.31
RIB3YDR487C PRI1P10363 409 aa13.08□□□□□ -0.32
RIB3YDR487C CHZ1P40019 153 aaPredicted RBP13.06□□□□□ -0.32
RIB3YDR487C PSK1P31374 1356 aa13.06□□□□□ -0.32
RIB3YDR487C LEU3P08638 886 aa13.05□□□□□ -0.32
RIB3YDR487C MSB3P48566 633 aaPredicted RBP13.02□□□□□ -0.33
RIB3YDR487C LEU2P04173 364 aaPredicted RBP13.01□□□□□ -0.33
RIB3YDR487C ADE6P38972 1358 aaKnown RBP13.01□□□□□ -0.33
RIB3YDR487C RRP5Q05022 1729 aaKnown RBP13□□□□□ -0.33
RIB3YDR487C CSE4P36012 229 aa12.99□□□□□ -0.33
RIB3YDR487C BUD31P25337 157 aaPredicted RBP12.98□□□□□ -0.33
RIB3YDR487C SCT1P32784 759 aa12.97□□□□□ -0.33
RIB3YDR487C MTR4P47047 1073 aaKnown RBP12.97□□□□□ -0.33
RIB3YDR487C TCB1Q12466 1186 aa12.97□□□□□ -0.33
RIB3YDR487C IES2P40154 320 aa12.96□□□□□ -0.33
RIB3YDR487C RPS24AP0CX31 135 aaKnown RBP12.95□□□□□ -0.34
RIB3YDR487C RPS24BP0CX32 135 aaKnown RBP12.95□□□□□ -0.34
RIB3YDR487C PRP43P53131 767 aaKnown RBP12.94□□□□□ -0.34
RIB3YDR487C SLM3Q12093 417 aa12.93□□□□□ -0.34
RIB3YDR487C YLR419WQ06698 1435 aaKnown RBP12.93□□□□□ -0.34
RIB3YDR487C UBP1P25037 809 aa12.92□□□□□ -0.34
RIB3YDR487C DOT5P40553 215 aa12.9□□□□□ -0.34
RIB3YDR487C RPN11P43588 306 aaKnown RBP12.9□□□□□ -0.34
RIB3YDR487C ENP1P38333 483 aaKnown RBP12.89□□□□□ -0.35
RIB3YDR487C YRF1-2P40105 1681 aa12.88□□□□□ -0.35
RIB3YDR487C RSF2P46974 1380 aa12.87□□□□□ -0.35
RIB3YDR487C TY4B-HP0C2J7 1802 aa12.86□□□□□ -0.35
RIB3YDR487C TY4B-JP47024 1803 aa12.86□□□□□ -0.35
RIB3YDR487C YJL181WP46987 611 aa12.85□□□□□ -0.35
RIB3YDR487C ROM2P51862 1356 aaKnown RBP12.83□□□□□ -0.36
RIB3YDR487C YEF3P16521 1044 aaKnown RBP12.83□□□□□ -0.36
RIB3YDR487C XKS1P42826 600 aa12.83□□□□□ -0.36
RIB3YDR487C FOX2Q02207 900 aaKnown RBP12.83□□□□□ -0.36
RIB3YDR487C YKL133CP36066 463 aa12.81□□□□□ -0.36
RIB3YDR487C LAM6Q08001 693 aa12.8□□□□□ -0.36
RIB3YDR487C YML133CQ03099 1374 aa12.8□□□□□ -0.36
RIB3YDR487C YLL067CQ07888 1374 aa12.8□□□□□ -0.36
RIB3YDR487C YLL066CQ99208 1374 aa12.8□□□□□ -0.36
RIB3YDR487C FKH1P40466 484 aa12.79□□□□□ -0.36
RIB3YDR487C GAS4Q08271 471 aa12.79□□□□□ -0.36
RIB3YDR487C DPS1P04802 557 aaKnown RBP12.78□□□□□ -0.36
RIB3YDR487C RTF1P53064 558 aa12.78□□□□□ -0.36
RIB3YDR487C PDI1P17967 522 aaKnown RBP12.77□□□□□ -0.37
RIB3YDR487C PRP40P33203 583 aaKnown RBP12.77□□□□□ -0.37
RIB3YDR487C YBL086CP38177 466 aa12.77□□□□□ -0.37
RIB3YDR487C NPR2P39923 615 aa12.76□□□□□ -0.37
RIB3YDR487C COBP00163 385 aa12.75□□□□□ -0.37
RIB3YDR487C RTG3P38165 486 aa12.75□□□□□ -0.37
RIB3YDR487C LYS4P49367 693 aaPredicted RBP12.75□□□□□ -0.37
RIB3YDR487C EDE1P34216 1381 aa12.74□□□□□ -0.37
RIB3YDR487C UGA2P38067 497 aa12.74□□□□□ -0.37
RIB3YDR487C URB1P34241 1764 aaKnown RBP12.74□□□□□ -0.37
RIB3YDR487C GTT3P39996 337 aa12.72□□□□□ -0.37
RIB3YDR487C ALD2P47771 506 aa12.71□□□□□ -0.37
RIB3YDR487C MEC3Q02574 474 aa12.7□□□□□ -0.38
RIB3YDR487C YRF1-4O13559 1382 aa12.69□□□□□ -0.38
RIB3YDR487C YKR075CP36155 307 aa12.69□□□□□ -0.38
RIB3YDR487C RCR1P38212 213 aa12.68□□□□□ -0.38
RIB3YDR487C SSA2P10592 639 aaKnown RBP12.67□□□□□ -0.38
RIB3YDR487C GRX4P32642 244 aa12.67□□□□□ -0.38
RIB3YDR487C POL5P39985 1022 aaKnown RBP12.67□□□□□ -0.38
RIB3YDR487C FRK1Q03002 865 aaPredicted RBP12.66□□□□□ -0.38
RIB3YDR487C TAP42Q04372 366 aa12.66□□□□□ -0.38
RIB3YDR487C FAP1P53971 965 aa12.65□□□□□ -0.38
RIB3YDR487C PDS5Q04264 1277 aa12.65□□□□□ -0.38
RIB3YDR487C HIM1Q06674 414 aa12.64□□□□□ -0.39
RIB3YDR487C ADE16P54113 591 aaKnown RBP12.63□□□□□ -0.39
RIB3YDR487C CTH1P47976 325 aa12.61□□□□□ -0.39
RIB3YDR487C YRF1-3P0CX14 1859 aa12.61□□□□□ -0.39
RIB3YDR487C YRF1-7P0CX15 1859 aa12.61□□□□□ -0.39
RIB3YDR487C YRF1-6P53819 1859 aa12.61□□□□□ -0.39
RIB3YDR487C SEC3P33332 1336 aaKnown RBP12.61□□□□□ -0.39
RIB3YDR487C SIR4P11978 1358 aa12.6□□□□□ -0.39
RIB3YDR487C ATG13Q06628 738 aa12.6□□□□□ -0.39
RIB3YDR487C FKS3Q04952 1785 aa12.6□□□□□ -0.39
RIB3YDR487C MHP1P43638 1398 aa12.59□□□□□ -0.39
RIB3YDR487C AUS1Q08409 1394 aa12.59□□□□□ -0.39
RIB3YDR487C APC1P53886 1748 aa12.58□□□□□ -0.4
RIB3YDR487C KAR2P16474 682 aaKnown RBP12.57□□□□□ -0.4
RIB3YDR487C YIL177CP40434 1758 aa12.56□□□□□ -0.4
RIB3YDR487C YJL225CP40889 1758 aa12.56□□□□□ -0.4
RIB3YDR487C MSB4Q12317 492 aa12.55□□□□□ -0.4
RIB3YDR487C SPT7P35177 1332 aa12.55□□□□□ -0.4
RIB3YDR487C BUB1P41695 1021 aaKnown RBP RIP-Chip data12.54□□□□□ -0.4not detected
RIB3YDR487C RPO41P13433 1351 aaKnown RBP12.54□□□□□ -0.4
RIB3YDR487C MLP1Q02455 1875 aaKnown RBP12.53□□□□□ -0.4
RIB3YDR487C BDF1P35817 686 aa12.53□□□□□ -0.4
RIB3YDR487C OSM1P21375 501 aaKnown RBP12.52□□□□□ -0.41
RIB3YDR487C ALD3P54114 506 aa12.52□□□□□ -0.41
RIB3YDR487C PAP2P53632 584 aaKnown RBP12.51□□□□□ -0.41
RIB3YDR487C INP54Q08227 384 aaKnown RBP12.51□□□□□ -0.41
RIB3YDR487C RPG1P38249 964 aaKnown RBP12.5□□□□□ -0.41
RIB3YDR487C GRX1P25373 110 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms