RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W RGR1P19263 1082 aa2.13□□□□□ -2.07
MSN5YDR335W GUA1P38625 525 aaKnown RBP2.13□□□□□ -2.07
MSN5YDR335W ISU2Q12056 156 aa2.13□□□□□ -2.07
MSN5YDR335W FRK1Q03002 865 aaPredicted RBP2.12□□□□□ -2.07
MSN5YDR335W YJU3P28321 313 aa2.12□□□□□ -2.07
MSN5YDR335W STR2P47164 639 aa2.12□□□□□ -2.07
MSN5YDR335W NIS1P53939 407 aa2.12□□□□□ -2.07
MSN5YDR335W AI4P03878 556 aa2.12□□□□□ -2.07
MSN5YDR335W MVP1P40959 511 aaKnown RBP2.12□□□□□ -2.07
MSN5YDR335W CKB1P43639 278 aa2.12□□□□□ -2.07
MSN5YDR335W COX6P00427 148 aa2.11□□□□□ -2.07
MSN5YDR335W YML020WQ03722 664 aa2.11□□□□□ -2.07
MSN5YDR335W SPT16P32558 1035 aaKnown RBP2.11□□□□□ -2.07
MSN5YDR335W HGH1P48362 394 aaKnown RBP2.11□□□□□ -2.07
MSN5YDR335W ISM1P48526 1002 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-DR4O74302 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-HP0C2I4 478 aaKnown RBP2.11□□□□□ -2.07
MSN5YDR335W TY1A-AP0CX57 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-PR1P0CX58 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-ORP0CX59 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-PR2P0CX60 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-DR5P0CX65 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-ER2P0CX66 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-GR3P0CX67 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-LR1P0CX68 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-MR2P0CX69 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-JR2P47099 440 aa2.11□□□□□ -2.07
MSN5YDR335W TBF1Q02457 562 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-DR1Q03856 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-ML1Q04706 440 aaKnown RBP2.11□□□□□ -2.07
MSN5YDR335W TY1A-BRQ12217 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-NL2Q12470 440 aa2.11□□□□□ -2.07
MSN5YDR335W TY1A-GR2Q12485 440 aa2.11□□□□□ -2.07
MSN5YDR335W KEX2P13134 814 aa2.1□□□□□ -2.07
MSN5YDR335W SDH2P21801 266 aa2.1□□□□□ -2.07
MSN5YDR335W PAT1P25644 796 aaKnown RBP2.1□□□□□ -2.07
MSN5YDR335W NUD1P32336 851 aa2.1□□□□□ -2.07
MSN5YDR335W ERG12P07277 443 aa2.1□□□□□ -2.07
MSN5YDR335W RAM1P22007 431 aa2.1□□□□□ -2.07
MSN5YDR335W ARH1P48360 493 aa2.1□□□□□ -2.07
MSN5YDR335W DPS1P04802 557 aaKnown RBP2.1□□□□□ -2.07
MSN5YDR335W KIN1P13185 1064 aa2.1□□□□□ -2.07
MSN5YDR335W ESS1P22696 170 aa2.1□□□□□ -2.07
MSN5YDR335W RRN7P40992 514 aa2.1□□□□□ -2.07
MSN5YDR335W NOP7P53261 605 aaKnown RBP2.1□□□□□ -2.07
MSN5YDR335W GAP1P19145 602 aaPredicted RBP2.09□□□□□ -2.07
MSN5YDR335W SLY41P22215 453 aa2.09□□□□□ -2.08
MSN5YDR335W TEA1P47988 759 aa2.08□□□□□ -2.08
MSN5YDR335W REV3P14284 1504 aa2.08□□□□□ -2.08
MSN5YDR335W SLX8P40072 274 aa2.08□□□□□ -2.08
MSN5YDR335W URN1Q06525 465 aaKnown RBP2.08□□□□□ -2.08
MSN5YDR335W NAP1P25293 417 aaKnown RBP2.07□□□□□ -2.08
MSN5YDR335W MET10P39692 1035 aa2.07□□□□□ -2.08
MSN5YDR335W CLA4P48562 842 aa2.07□□□□□ -2.08
MSN5YDR335W CSC1Q06538 782 aa2.07□□□□□ -2.08
MSN5YDR335W DNF1P32660 1571 aa2.07□□□□□ -2.08
MSN5YDR335W BUD20Q08004 166 aaPredicted RBP2.07□□□□□ -2.08
MSN5YDR335W GAR1P28007 205 aaKnown RBP2.07□□□□□ -2.08
MSN5YDR335W NOP53Q12080 455 aaKnown RBP2.07□□□□□ -2.08
MSN5YDR335W YEL077CQ3E7X8 1277 aa2.07□□□□□ -2.08
MSN5YDR335W ARG8P18544 423 aa2.06□□□□□ -2.08
MSN5YDR335W PAC1P39946 494 aaKnown RBP2.06□□□□□ -2.08
MSN5YDR335W FPK1P53739 893 aa2.06□□□□□ -2.08
MSN5YDR335W PRT1P06103 763 aaKnown RBP2.06□□□□□ -2.08
MSN5YDR335W KIP2P28743 706 aa2.06□□□□□ -2.08
MSN5YDR335W BNI4P53858 892 aa2.06□□□□□ -2.08
MSN5YDR335W MAK21Q12176 1025 aaKnown RBP2.06□□□□□ -2.08
MSN5YDR335W AGE1Q04412 482 aa2.05□□□□□ -2.08
MSN5YDR335W PUS5Q06244 254 aa2.05□□□□□ -2.08
MSN5YDR335W YDJ1P25491 409 aaKnown RBP2.05□□□□□ -2.08
MSN5YDR335W RPL34BP40525 121 aaKnown RBP2.05□□□□□ -2.08
MSN5YDR335W YJL007CP47080 104 aa2.05□□□□□ -2.08
MSN5YDR335W PKH3Q03306 898 aaPredicted RBP2.05□□□□□ -2.08
MSN5YDR335W TFB4Q12004 338 aa2.05□□□□□ -2.08
MSN5YDR335W RAS1P01119 309 aa2.04□□□□□ -2.08
MSN5YDR335W BRL1P38770 471 aa2.04□□□□□ -2.08
MSN5YDR335W TFB3Q03290 321 aa2.04□□□□□ -2.08
MSN5YDR335W MDS3P53094 1487 aa2.04□□□□□ -2.08
MSN5YDR335W ISF1P32488 338 aa2.04□□□□□ -2.08
MSN5YDR335W RPL34AP87262 121 aaPredicted RBP2.04□□□□□ -2.08
MSN5YDR335W MRF1P30775 413 aaPredicted RBP2.03□□□□□ -2.08
MSN5YDR335W XDJ1P39102 459 aa2.03□□□□□ -2.08
MSN5YDR335W AIR1P40507 360 aaKnown RBP2.03□□□□□ -2.08
MSN5YDR335W SSA1P10591 642 aaKnown RBP2.03□□□□□ -2.08
MSN5YDR335W MMP1Q12372 583 aa2.03□□□□□ -2.08
MSN5YDR335W SRF1Q12516 437 aa2.03□□□□□ -2.08
MSN5YDR335W GLN1P32288 370 aaKnown RBP2.03□□□□□ -2.09
MSN5YDR335W CST6P40535 587 aa2.03□□□□□ -2.09
MSN5YDR335W KXD1P53158 218 aa2.03□□□□□ -2.09
MSN5YDR335W TUB4P53378 473 aa2.03□□□□□ -2.09
MSN5YDR335W BNI1P41832 1953 aa2.02□□□□□ -2.09
MSN5YDR335W BIO2P32451 375 aa2.02□□□□□ -2.09
MSN5YDR335W ESC1Q03661 1658 aaKnown RBP2.02□□□□□ -2.09
MSN5YDR335W SLD2P34252 453 aa2.02□□□□□ -2.09
MSN5YDR335W ATG32P40458 529 aa2.02□□□□□ -2.09
MSN5YDR335W CSN12P47130 423 aa2.02□□□□□ -2.09
MSN5YDR335W GEF1P37020 779 aa2.01□□□□□ -2.09
MSN5YDR335W HST3P53687 447 aa2.01□□□□□ -2.09
MSN5YDR335W YDL206WQ12424 762 aa2.01□□□□□ -2.09
MSN5YDR335W YNL108CP53929 270 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms