RNA–Protein interactions for RNA: YDR255C

RMD5, Transcript of Component of GID Complex that confers ubiquitin ligase (U3) activity, yeastyeast

Gene RMD5, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RMD5YDR255C SAS4Q04003 481 aa9.46□□□□□ -0.9
RMD5YDR255C RAS1P01119 309 aa9.41□□□□□ -0.9
RMD5YDR255C SEC2P17065 759 aa9.4□□□□□ -0.9
RMD5YDR255C TY1A-DR4O74302 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-HP0C2I4 478 aaKnown RBP9.39□□□□□ -0.91
RMD5YDR255C TY1A-AP0CX57 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-PR1P0CX58 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-ORP0CX59 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-PR2P0CX60 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-DR5P0CX65 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-ER2P0CX66 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-GR3P0CX67 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-LR1P0CX68 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-MR2P0CX69 440 aa9.39□□□□□ -0.91
RMD5YDR255C KEX2P13134 814 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-JR2P47099 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-DR1Q03856 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-ML1Q04706 440 aaKnown RBP9.39□□□□□ -0.91
RMD5YDR255C TY1A-BRQ12217 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-NL2Q12470 440 aa9.39□□□□□ -0.91
RMD5YDR255C TY1A-GR2Q12485 440 aa9.39□□□□□ -0.91
RMD5YDR255C SDH2P21801 266 aa9.38□□□□□ -0.91
RMD5YDR255C ERF2Q06551 359 aa9.38□□□□□ -0.91
RMD5YDR255C YMR196WQ04336 1088 aa9.36□□□□□ -0.91
RMD5YDR255C MRF1P30775 413 aaPredicted RBP9.35□□□□□ -0.91
RMD5YDR255C SPT16P32558 1035 aaKnown RBP9.34□□□□□ -0.91
RMD5YDR255C AMS1P22855 1083 aa9.33□□□□□ -0.92
RMD5YDR255C ERG12P07277 443 aa9.31□□□□□ -0.92
RMD5YDR255C RRN7P40992 514 aa9.31□□□□□ -0.92
RMD5YDR255C NIS1P53939 407 aa9.31□□□□□ -0.92
RMD5YDR255C YEL077CQ3E7X8 1277 aa9.31□□□□□ -0.92
RMD5YDR255C SSA2P10592 639 aaKnown RBP9.3□□□□□ -0.92
RMD5YDR255C HGH1P48362 394 aaKnown RBP9.3□□□□□ -0.92
RMD5YDR255C RTF1P53064 558 aa9.29□□□□□ -0.92
RMD5YDR255C CSN12P47130 423 aa9.28□□□□□ -0.92
RMD5YDR255C SIT4P20604 311 aa9.27□□□□□ -0.93
RMD5YDR255C PAT1P25644 796 aaKnown RBP9.27□□□□□ -0.93
RMD5YDR255C FPK1P53739 893 aa9.27□□□□□ -0.93
RMD5YDR255C GLN1P32288 370 aaKnown RBP9.26□□□□□ -0.93
RMD5YDR255C HST2P53686 357 aa9.26□□□□□ -0.93
RMD5YDR255C YNL115CP53925 644 aa9.26□□□□□ -0.93
RMD5YDR255C GUA1P38625 525 aaKnown RBP9.23□□□□□ -0.93
RMD5YDR255C SRC1Q03707 834 aa9.23□□□□□ -0.93
RMD5YDR255C MMP1Q12372 583 aa9.23□□□□□ -0.93
RMD5YDR255C CST6P40535 587 aa9.22□□□□□ -0.93
RMD5YDR255C HPC2Q01448 625 aa9.22□□□□□ -0.93
RMD5YDR255C TUB4P53378 473 aa9.21□□□□□ -0.94
RMD5YDR255C PAC1P39946 494 aaKnown RBP9.2□□□□□ -0.94
RMD5YDR255C FRK1Q03002 865 aaPredicted RBP9.2□□□□□ -0.94
RMD5YDR255C SLY41P22215 453 aa9.19□□□□□ -0.94
RMD5YDR255C SCJ1P25303 377 aa9.19□□□□□ -0.94
RMD5YDR255C BRL1P38770 471 aa9.18□□□□□ -0.94
RMD5YDR255C AGE1Q04412 482 aa9.18□□□□□ -0.94
RMD5YDR255C TYW1Q08960 810 aaKnown RBP9.16□□□□□ -0.94
RMD5YDR255C BDP1P46678 594 aa9.15□□□□□ -0.94
RMD5YDR255C LAM6Q08001 693 aa9.14□□□□□ -0.95
RMD5YDR255C ESS1P22696 170 aa9.13□□□□□ -0.95
RMD5YDR255C KTR1P27810 393 aaKnown RBP9.13□□□□□ -0.95
RMD5YDR255C CLA4P48562 842 aa9.13□□□□□ -0.95
RMD5YDR255C PKH3Q03306 898 aaPredicted RBP9.13□□□□□ -0.95
RMD5YDR255C DMA2P53924 522 aa9.12□□□□□ -0.95
RMD5YDR255C TBF1Q02457 562 aa9.12□□□□□ -0.95
RMD5YDR255C TRK1P12685 1235 aa9.1□□□□□ -0.95
RMD5YDR255C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.1□□□□□ -0.95not detected
RMD5YDR255C AIR1P40507 360 aaKnown RBP9.09□□□□□ -0.95
RMD5YDR255C PUS6P53294 404 aa9.09□□□□□ -0.95
RMD5YDR255C TFB3Q03290 321 aa9.09□□□□□ -0.95
RMD5YDR255C MOD5P07884 428 aa9.07□□□□□ -0.96
RMD5YDR255C ARG8P18544 423 aa9.07□□□□□ -0.96
RMD5YDR255C YJU3P28321 313 aa9.06□□□□□ -0.96
RMD5YDR255C KXD1P53158 218 aa9.06□□□□□ -0.96
RMD5YDR255C PUS5Q06244 254 aa9.06□□□□□ -0.96
RMD5YDR255C RAD59Q12223 238 aa9.06□□□□□ -0.96
RMD5YDR255C TRM1P15565 570 aaKnown RBP9.05□□□□□ -0.96
RMD5YDR255C CSE4P36012 229 aa9.01□□□□□ -0.97
RMD5YDR255C YDL206WQ12424 762 aa9.01□□□□□ -0.97
RMD5YDR255C PDC1P06169 563 aaKnown RBP9□□□□□ -0.97
RMD5YDR255C YBL036CP38197 257 aa9□□□□□ -0.97
RMD5YDR255C HXT10P43581 546 aa9□□□□□ -0.97
RMD5YDR255C HED1Q03937 162 aa9□□□□□ -0.97
RMD5YDR255C RSC30P38781 883 aa8.99□□□□□ -0.97
RMD5YDR255C RPA14P50106 137 aa8.99□□□□□ -0.97
RMD5YDR255C TAF7Q05021 590 aa8.99□□□□□ -0.97
RMD5YDR255C ALR1Q08269 859 aa8.99□□□□□ -0.97
RMD5YDR255C CDC4P07834 779 aa8.96□□□□□ -0.98
RMD5YDR255C PKC1P24583 1151 aa8.96□□□□□ -0.98
RMD5YDR255C YPR097WQ06839 1073 aa8.95□□□□□ -0.98
RMD5YDR255C SPT5P27692 1063 aaKnown RBP8.94□□□□□ -0.98
RMD5YDR255C TPD3P31383 635 aa8.94□□□□□ -0.98
RMD5YDR255C RRD1P40454 393 aaKnown RBP8.94□□□□□ -0.98
RMD5YDR255C MAK16P10962 306 aaPredicted RBP8.93□□□□□ -0.98
RMD5YDR255C MET32Q12041 191 aa8.91□□□□□ -0.98
RMD5YDR255C YJL007CP47080 104 aa8.9□□□□□ -0.98
RMD5YDR255C ASH1P34233 588 aa8.89□□□□□ -0.99
RMD5YDR255C NAF1P53919 492 aaKnown RBP8.89□□□□□ -0.99
RMD5YDR255C SYH1Q02875 849 aaKnown RBP8.89□□□□□ -0.99
RMD5YDR255C KIP2P28743 706 aa8.88□□□□□ -0.99
RMD5YDR255C RPL34BP40525 121 aaKnown RBP8.88□□□□□ -0.99
RMD5YDR255C BRE2P43132 505 aa8.88□□□□□ -0.99
RMD5YDR255C GCR2Q01722 534 aa8.87□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms