RNA–Protein interactions for RNA: YDR239C

YDR239C, Transcript of Protein of unknown function, yeast

Gene YDR239C, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR239C	YDR239C	ASH1	P34233	588 aa		3.76	□□□□□ -1.81
YDR239C	YDR239C	BDP1	P46678	594 aa		3.76	□□□□□ -1.81
YDR239C	YDR239C	RRN7	P40992	514 aa		3.74	□□□□□ -1.81
YDR239C	YDR239C	AFT1	P22149	690 aa		3.71	□□□□□ -1.81
YDR239C	YDR239C	YDL176W	Q12027	708 aa		3.71	□□□□□ -1.81
YDR239C	YDR239C	RRD1	P40454	393 aa	Known RBP	3.71	□□□□□ -1.82
YDR239C	YDR239C	SET1	P38827	1080 aa	Known RBP	3.7	□□□□□ -1.82
YDR239C	YDR239C	YLR346C	Q06139	101 aa		3.69	□□□□□ -1.82
YDR239C	YDR239C	TY1A-DR4	O74302	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-H	P0C2I4	478 aa	Known RBP	3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-A	P0CX57	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-PR1	P0CX58	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-OR	P0CX59	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-PR2	P0CX60	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-DR5	P0CX65	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-ER2	P0CX66	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-GR3	P0CX67	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-LR1	P0CX68	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-MR2	P0CX69	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TRK2	P28584	889 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-JR2	P47099	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	YGR035C	P53222	116 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	CAF120	P53836	1060 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-DR1	Q03856	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-ML1	Q04706	440 aa	Known RBP	3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-BR	Q12217	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-NL2	Q12470	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	TY1A-GR2	Q12485	440 aa		3.68	□□□□□ -1.82
YDR239C	YDR239C	SIS2	P36024	562 aa		3.67	□□□□□ -1.82
YDR239C	YDR239C	SEC2	P17065	759 aa		3.67	□□□□□ -1.82
YDR239C	YDR239C	YJR115W	P47152	169 aa		3.67	□□□□□ -1.82
YDR239C	YDR239C	MET32	Q12041	191 aa		3.67	□□□□□ -1.82
YDR239C	YDR239C	GAP1	P19145	602 aa	Predicted RBP	3.66	□□□□□ -1.82
YDR239C	YDR239C	DMA1	P38823	416 aa		3.65	□□□□□ -1.83
YDR239C	YDR239C	SRF1	Q12516	437 aa		3.65	□□□□□ -1.83
YDR239C	YDR239C	YDR090C	Q03193	310 aa		3.63	□□□□□ -1.83
YDR239C	YDR239C	YRB30	P53107	440 aa	Predicted RBP	3.63	□□□□□ -1.83
YDR239C	YDR239C	EBP2	P36049	427 aa	Known RBP	3.62	□□□□□ -1.83
YDR239C	YDR239C	YPR109W	Q06104	294 aa		3.62	□□□□□ -1.83
YDR239C	YDR239C	ACO2	P39533	789 aa		3.62	□□□□□ -1.83
YDR239C	YDR239C	PUS5	Q06244	254 aa		3.61	□□□□□ -1.83
YDR239C	YDR239C	PUS1	Q12211	544 aa	Known RBP	3.61	□□□□□ -1.83
YDR239C	YDR239C	YPR204W	Q08995	1032 aa		3.61	□□□□□ -1.83
YDR239C	YDR239C	NAP1	P25293	417 aa	Known RBP	3.6	□□□□□ -1.83
YDR239C	YDR239C	UGA3	P26370	528 aa		3.6	□□□□□ -1.83
YDR239C	YDR239C	REF2	P42073	533 aa	Predicted RBP	3.6	□□□□□ -1.83
YDR239C	YDR239C	LEO1	P38439	464 aa		3.6	□□□□□ -1.83
YDR239C	YDR239C	ORC6	P38826	435 aa		3.6	□□□□□ -1.83
YDR239C	YDR239C	KEX2	P13134	814 aa		3.59	□□□□□ -1.84
YDR239C	YDR239C	MVP1	P40959	511 aa	Known RBP	3.59	□□□□□ -1.84
YDR239C	YDR239C	ICP55	P40051	511 aa		3.58	□□□□□ -1.84
YDR239C	YDR239C	MSB3	P48566	633 aa	Predicted RBP	3.58	□□□□□ -1.84
YDR239C	YDR239C	CAB3	P36076	571 aa		3.58	□□□□□ -1.84
YDR239C	YDR239C	YFR016C	P43597	1233 aa	Known RBP	3.58	□□□□□ -1.84
YDR239C	YDR239C	IOC4	Q04213	475 aa		3.58	□□□□□ -1.84
YDR239C	YDR239C	OPT2	Q06593	877 aa		3.58	□□□□□ -1.84
YDR239C	YDR239C	LSB3	P43603	459 aa	Known RBP	3.57	□□□□□ -1.84
YDR239C	YDR239C	SCW11	P53189	542 aa		3.57	□□□□□ -1.84
YDR239C	YDR239C	AIM44	Q99299	758 aa		3.57	□□□□□ -1.84
YDR239C	YDR239C	TYW1	Q08960	810 aa	Known RBP	3.56	□□□□□ -1.84
YDR239C	YDR239C	GLY1	P37303	387 aa	Known RBP	3.56	□□□□□ -1.84
YDR239C	YDR239C	PAC1	P39946	494 aa	Known RBP	3.56	□□□□□ -1.84
YDR239C	YDR239C	KXD1	P53158	218 aa		3.56	□□□□□ -1.84
YDR239C	YDR239C	MOD5	P07884	428 aa		3.55	□□□□□ -1.84
YDR239C	YDR239C	SYH1	Q02875	849 aa	Known RBP	3.55	□□□□□ -1.84
YDR239C	YDR239C	HPF1	Q05164	967 aa		3.55	□□□□□ -1.84
YDR239C	YDR239C	PTK2	P47116	818 aa	Known RBP	3.55	□□□□□ -1.84
YDR239C	YDR239C	MAK21	Q12176	1025 aa	Known RBP	3.55	□□□□□ -1.84
YDR239C	YDR239C	ERF2	Q06551	359 aa		3.54	□□□□□ -1.84
YDR239C	YDR239C	MIP1	P15801	1254 aa		3.54	□□□□□ -1.84
YDR239C	YDR239C	RGR1	P19263	1082 aa		3.53	□□□□□ -1.84
YDR239C	YDR239C	YIR007W	P40566	764 aa		3.53	□□□□□ -1.84
YDR239C	YDR239C	NUP85	P46673	744 aa		3.53	□□□□□ -1.84
YDR239C	YDR239C	PHM7	Q12252	991 aa		3.53	□□□□□ -1.84
YDR239C	YDR239C	RPS0B	P46654	252 aa	Known RBP	3.53	□□□□□ -1.84
YDR239C	YDR239C	TUB4	P53378	473 aa		3.52	□□□□□ -1.85
YDR239C	YDR239C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.52	□□□□□ -1.85	not detected
YDR239C	YDR239C	RTT106	P40161	455 aa		3.51	□□□□□ -1.85
YDR239C	YDR239C	COX6	P00427	148 aa		3.51	□□□□□ -1.85
YDR239C	YDR239C	KIP2	P28743	706 aa		3.51	□□□□□ -1.85
YDR239C	YDR239C	KRI1	P42846	591 aa	Known RBP	3.5	□□□□□ -1.85
YDR239C	YDR239C	DPH6	Q12429	685 aa		3.49	□□□□□ -1.85
YDR239C	YDR239C	UBP2	Q01476	1272 aa		3.49	□□□□□ -1.85
YDR239C	YDR239C	CLB5	P30283	435 aa		3.48	□□□□□ -1.85
YDR239C	YDR239C	RTF1	P53064	558 aa		3.48	□□□□□ -1.85
YDR239C	YDR239C	LSC2	P53312	427 aa		3.48	□□□□□ -1.85
YDR239C	YDR239C	NOP2	P40991	618 aa	Known RBP	3.48	□□□□□ -1.85
YDR239C	YDR239C	YNL115C	P53925	644 aa		3.47	□□□□□ -1.85
YDR239C	YDR239C	TY1A-BL	Q12266	440 aa		3.47	□□□□□ -1.85
YDR239C	YDR239C	HXT10	P43581	546 aa		3.47	□□□□□ -1.85
YDR239C	YDR239C	ARG82	P07250	355 aa		3.46	□□□□□ -1.86
YDR239C	YDR239C	TPD3	P31383	635 aa		3.46	□□□□□ -1.86
YDR239C	YDR239C	AGE1	Q04412	482 aa		3.46	□□□□□ -1.86
YDR239C	YDR239C	IXR1	P33417	597 aa		3.46	□□□□□ -1.86
YDR239C	YDR239C	MNN4	P36044	1178 aa		3.46	□□□□□ -1.86
YDR239C	YDR239C	SBP1	P10080	294 aa	Known RBP	3.45	□□□□□ -1.86
YDR239C	YDR239C	LYS5	P50113	272 aa		3.45	□□□□□ -1.86
YDR239C	YDR239C	SAS10	Q12136	610 aa	Predicted RBP	3.44	□□□□□ -1.86
YDR239C	YDR239C	NSG2	P53898	299 aa		3.43	□□□□□ -1.86
YDR239C	YDR239C	VPS70	P47161	811 aa		3.43	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms