RNA–Protein interactions for RNA: YDL022W

GPD1, Transcript of NAD-dependent glycerol-3-phosphate dehydrogenase, yeastyeast

Gene GPD1, Length 1,176 nt, Biotype protein coding, Subcellular localisation Cell cortex, Endoplasmic reticulum, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GPD1YDL022W CPS1P27614 576 aa9.53□□□□□ -0.88
GPD1YDL022W IMH1Q06704 911 aaKnown RBP9.53□□□□□ -0.88
GPD1YDL022W TAF8Q03750 510 aa9.49□□□□□ -0.89
GPD1YDL022W TAF5P38129 798 aa9.48□□□□□ -0.89
GPD1YDL022W TY4B-HP0C2J7 1802 aa9.47□□□□□ -0.89
GPD1YDL022W TY4B-JP47024 1803 aa9.47□□□□□ -0.89
GPD1YDL022W PRP45P28004 379 aaPredicted RBP9.47□□□□□ -0.89
GPD1YDL022W RCM1P53972 490 aa9.44□□□□□ -0.9
GPD1YDL022W EDE1P34216 1381 aa9.44□□□□□ -0.9
GPD1YDL022W ADE6P38972 1358 aaKnown RBP9.44□□□□□ -0.9
GPD1YDL022W PSK1P31374 1356 aa9.43□□□□□ -0.9
GPD1YDL022W PRP5P21372 849 aaPredicted RBP9.43□□□□□ -0.9
GPD1YDL022W BUD31P25337 157 aaPredicted RBP9.41□□□□□ -0.9
GPD1YDL022W PPH3P32345 308 aa9.4□□□□□ -0.9
GPD1YDL022W SCT1P32784 759 aa9.39□□□□□ -0.91
GPD1YDL022W URB1P34241 1764 aaKnown RBP9.39□□□□□ -0.91
GPD1YDL022W UBP1P25037 809 aa9.38□□□□□ -0.91
GPD1YDL022W SPE2P21182 396 aa9.37□□□□□ -0.91
GPD1YDL022W LEU3P08638 886 aa9.36□□□□□ -0.91
GPD1YDL022W PRP43P53131 767 aaKnown RBP9.36□□□□□ -0.91
GPD1YDL022W ROM2P51862 1356 aaKnown RBP9.36□□□□□ -0.91
GPD1YDL022W GTT3P39996 337 aa9.35□□□□□ -0.91
GPD1YDL022W MSB3P48566 633 aaPredicted RBP9.34□□□□□ -0.91
GPD1YDL022W RSF2P46974 1380 aa9.34□□□□□ -0.91
GPD1YDL022W YEF3P16521 1044 aaKnown RBP9.33□□□□□ -0.92
GPD1YDL022W MTR4P47047 1073 aaKnown RBP9.33□□□□□ -0.92
GPD1YDL022W TCB1Q12466 1186 aa9.33□□□□□ -0.92
GPD1YDL022W LEU2P04173 364 aaPredicted RBP9.32□□□□□ -0.92
GPD1YDL022W IES2P40154 320 aa9.32□□□□□ -0.92
GPD1YDL022W KIP3P53086 805 aaKnown RBP9.32□□□□□ -0.92
GPD1YDL022W FKS3Q04952 1785 aa9.32□□□□□ -0.92
GPD1YDL022W YRF1-3P0CX14 1859 aa9.3□□□□□ -0.92
GPD1YDL022W YRF1-7P0CX15 1859 aa9.3□□□□□ -0.92
GPD1YDL022W YRF1-6P53819 1859 aa9.3□□□□□ -0.92
GPD1YDL022W SLM3Q12093 417 aa9.3□□□□□ -0.92
GPD1YDL022W DOT5P40553 215 aa9.29□□□□□ -0.92
GPD1YDL022W RPN11P43588 306 aaKnown RBP9.28□□□□□ -0.92
GPD1YDL022W CHZ1P40019 153 aaPredicted RBP9.27□□□□□ -0.93
GPD1YDL022W YLR419WQ06698 1435 aaKnown RBP9.26□□□□□ -0.93
GPD1YDL022W UGA2P38067 497 aa9.26□□□□□ -0.93
GPD1YDL022W CSE4P36012 229 aa9.25□□□□□ -0.93
GPD1YDL022W YJL181WP46987 611 aa9.25□□□□□ -0.93
GPD1YDL022W YBL086CP38177 466 aa9.24□□□□□ -0.93
GPD1YDL022W FOX2Q02207 900 aaKnown RBP9.24□□□□□ -0.93
GPD1YDL022W APC1P53886 1748 aa9.23□□□□□ -0.93
GPD1YDL022W PRP40P33203 583 aaKnown RBP9.23□□□□□ -0.93
GPD1YDL022W ENP1P38333 483 aaKnown RBP9.23□□□□□ -0.93
GPD1YDL022W ALD2P47771 506 aa9.23□□□□□ -0.93
GPD1YDL022W LAM6Q08001 693 aa9.23□□□□□ -0.93
GPD1YDL022W RPS24AP0CX31 135 aaKnown RBP9.21□□□□□ -0.94
GPD1YDL022W RPS24BP0CX32 135 aaKnown RBP9.21□□□□□ -0.94
GPD1YDL022W YIL177CP40434 1758 aa9.21□□□□□ -0.94
GPD1YDL022W YJL225CP40889 1758 aa9.21□□□□□ -0.94
GPD1YDL022W YKL133CP36066 463 aa9.2□□□□□ -0.94
GPD1YDL022W NPR2P39923 615 aa9.2□□□□□ -0.94
GPD1YDL022W SNF2P22082 1703 aa9.18□□□□□ -0.94
GPD1YDL022W XKS1P42826 600 aa9.18□□□□□ -0.94
GPD1YDL022W MLP1Q02455 1875 aaKnown RBP9.18□□□□□ -0.94
GPD1YDL022W YML133CQ03099 1374 aa9.17□□□□□ -0.94
GPD1YDL022W YLL067CQ07888 1374 aa9.17□□□□□ -0.94
GPD1YDL022W YLL066CQ99208 1374 aa9.17□□□□□ -0.94
GPD1YDL022W SSA2P10592 639 aaKnown RBP9.17□□□□□ -0.94
GPD1YDL022W MEC3Q02574 474 aa9.16□□□□□ -0.94
GPD1YDL022W SPT7P35177 1332 aa9.15□□□□□ -0.94
GPD1YDL022W YKR075CP36155 307 aa9.15□□□□□ -0.94
GPD1YDL022W LYS4P49367 693 aaPredicted RBP9.15□□□□□ -0.94
GPD1YDL022W COBP00163 385 aa9.14□□□□□ -0.95
GPD1YDL022W FKH1P40466 484 aa9.14□□□□□ -0.95
GPD1YDL022W RTF1P53064 558 aa9.14□□□□□ -0.95
GPD1YDL022W SIR4P11978 1358 aa9.13□□□□□ -0.95
GPD1YDL022W SSA1P10591 642 aaKnown RBP9.13□□□□□ -0.95
GPD1YDL022W PDI1P17967 522 aaKnown RBP9.13□□□□□ -0.95
GPD1YDL022W CTH1P47976 325 aa9.12□□□□□ -0.95
GPD1YDL022W GRX4P32642 244 aa9.11□□□□□ -0.95
GPD1YDL022W YRF1-4O13559 1382 aa9.11□□□□□ -0.95
GPD1YDL022W BDF1P35817 686 aa9.1□□□□□ -0.95
GPD1YDL022W DPS1P04802 557 aaKnown RBP9.09□□□□□ -0.95
GPD1YDL022W TAP42Q04372 366 aa9.09□□□□□ -0.95
GPD1YDL022W RCR1P38212 213 aa9.08□□□□□ -0.96
GPD1YDL022W ORC1P54784 914 aaPredicted RBP9.08□□□□□ -0.96
GPD1YDL022W RIM15P43565 1770 aa9.07□□□□□ -0.96
GPD1YDL022W SEC3P33332 1336 aaKnown RBP9.06□□□□□ -0.96
GPD1YDL022W ALD3P54114 506 aa9.06□□□□□ -0.96
GPD1YDL022W GAS4Q08271 471 aa9.06□□□□□ -0.96
GPD1YDL022W FRK1Q03002 865 aaPredicted RBP9.05□□□□□ -0.96
GPD1YDL022W MSB4Q12317 492 aa9.05□□□□□ -0.96
GPD1YDL022W ADE16P54113 591 aaKnown RBP9.04□□□□□ -0.96
GPD1YDL022W RPO41P13433 1351 aaKnown RBP9.02□□□□□ -0.97
GPD1YDL022W RAD4P14736 754 aa9.02□□□□□ -0.97
GPD1YDL022W ATG13Q06628 738 aa9.02□□□□□ -0.97
GPD1YDL022W AUS1Q08409 1394 aa9.01□□□□□ -0.97
GPD1YDL022W GRX1P25373 110 aaKnown RBP9□□□□□ -0.97
GPD1YDL022W RTG3P38165 486 aa9□□□□□ -0.97
GPD1YDL022W RPG1P38249 964 aaKnown RBP9□□□□□ -0.97
GPD1YDL022W UTP22P53254 1237 aaPredicted RBP9□□□□□ -0.97
GPD1YDL022W BUG1Q12191 341 aa9□□□□□ -0.97
GPD1YDL022W CTF4Q01454 927 aa8.98□□□□□ -0.97
GPD1YDL022W MHP1P43638 1398 aa8.98□□□□□ -0.97
GPD1YDL022W OSM1P21375 501 aaKnown RBP8.96□□□□□ -0.98
GPD1YDL022W INP54Q08227 384 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms