RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A NPL4P33755 580 aa6.77□□□□□ -1.33
RIM1YCR028C-A NIS1P53939 407 aa6.77□□□□□ -1.33
RIM1YCR028C-A ISM1P48526 1002 aa6.75□□□□□ -1.33
RIM1YCR028C-A FPK1P53739 893 aa6.75□□□□□ -1.33
RIM1YCR028C-A SDH2P21801 266 aa6.74□□□□□ -1.33
RIM1YCR028C-A YMR196WQ04336 1088 aa6.74□□□□□ -1.33
RIM1YCR028C-A SIT4P20604 311 aa6.73□□□□□ -1.33
RIM1YCR028C-A GCD11P32481 527 aaKnown RBP6.73□□□□□ -1.33
RIM1YCR028C-A STR2P47164 639 aa6.73□□□□□ -1.33
RIM1YCR028C-A BUD20Q08004 166 aaPredicted RBP6.73□□□□□ -1.33
RIM1YCR028C-A CSN12P47130 423 aa6.72□□□□□ -1.33
RIM1YCR028C-A TYW1Q08960 810 aaKnown RBP6.72□□□□□ -1.33
RIM1YCR028C-A KEX2P13134 814 aa6.71□□□□□ -1.34
RIM1YCR028C-A SCJ1P25303 377 aa6.71□□□□□ -1.34
RIM1YCR028C-A GUA1P38625 525 aaKnown RBP6.71□□□□□ -1.34
RIM1YCR028C-A ERF2Q06551 359 aa6.71□□□□□ -1.34
RIM1YCR028C-A YNL115CP53925 644 aa6.7□□□□□ -1.34
RIM1YCR028C-A PRT1P06103 763 aaKnown RBP6.69□□□□□ -1.34
RIM1YCR028C-A GLN1P32288 370 aaKnown RBP6.69□□□□□ -1.34
RIM1YCR028C-A HST2P53686 357 aa6.69□□□□□ -1.34
RIM1YCR028C-A YPL062WQ02781 134 aa6.69□□□□□ -1.34
RIM1YCR028C-A MMP1Q12372 583 aa6.69□□□□□ -1.34
RIM1YCR028C-A SEC2P17065 759 aa6.67□□□□□ -1.34
RIM1YCR028C-A SLY41P22215 453 aa6.67□□□□□ -1.34
RIM1YCR028C-A KTR1P27810 393 aaKnown RBP6.67□□□□□ -1.34
RIM1YCR028C-A RTF1P53064 558 aa6.67□□□□□ -1.34
RIM1YCR028C-A TY1A-DR4O74302 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-HP0C2I4 478 aaKnown RBP6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-AP0CX57 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-PR1P0CX58 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-ORP0CX59 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-PR2P0CX60 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-DR5P0CX65 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-ER2P0CX66 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-GR3P0CX67 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-LR1P0CX68 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-MR2P0CX69 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A ESS1P22696 170 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-JR2P47099 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-DR1Q03856 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-ML1Q04706 440 aaKnown RBP6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-BRQ12217 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-NL2Q12470 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A TY1A-GR2Q12485 440 aa6.65□□□□□ -1.34
RIM1YCR028C-A SSA2P10592 639 aaKnown RBP6.64□□□□□ -1.35
RIM1YCR028C-A SAS4Q04003 481 aa6.63□□□□□ -1.35
RIM1YCR028C-A YJU3P28321 313 aa6.62□□□□□ -1.35
RIM1YCR028C-A DMA2P53924 522 aa6.62□□□□□ -1.35
RIM1YCR028C-A SPT16P32558 1035 aaKnown RBP6.61□□□□□ -1.35
RIM1YCR028C-A HPC2Q01448 625 aa6.61□□□□□ -1.35
RIM1YCR028C-A PKH3Q03306 898 aaPredicted RBP6.61□□□□□ -1.35
RIM1YCR028C-A YEL077CQ3E7X8 1277 aa6.61□□□□□ -1.35
RIM1YCR028C-A PAT1P25644 796 aaKnown RBP6.6□□□□□ -1.35
RIM1YCR028C-A GAR1P28007 205 aaKnown RBP6.6□□□□□ -1.35
RIM1YCR028C-A PUS6P53294 404 aa6.6□□□□□ -1.35
RIM1YCR028C-A TUB4P53378 473 aa6.6□□□□□ -1.35
RIM1YCR028C-A RRN7P40992 514 aa6.59□□□□□ -1.35
RIM1YCR028C-A ARG8P18544 423 aa6.58□□□□□ -1.36
RIM1YCR028C-A TFB3Q03290 321 aa6.58□□□□□ -1.36
RIM1YCR028C-A AIR1P40507 360 aaKnown RBP6.57□□□□□ -1.36
RIM1YCR028C-A AGE1Q04412 482 aa6.57□□□□□ -1.36
RIM1YCR028C-A TRM1P15565 570 aaKnown RBP6.56□□□□□ -1.36
RIM1YCR028C-A MRF1P30775 413 aaPredicted RBP6.56□□□□□ -1.36
RIM1YCR028C-A BRL1P38770 471 aa6.56□□□□□ -1.36
RIM1YCR028C-A BUB1P41695 1021 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
RIM1YCR028C-A GBP2P25555 427 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
RIM1YCR028C-A RSC30P38781 883 aa6.55□□□□□ -1.36
RIM1YCR028C-A PAC1P39946 494 aaKnown RBP6.55□□□□□ -1.36
RIM1YCR028C-A HGH1P48362 394 aaKnown RBP6.55□□□□□ -1.36
RIM1YCR028C-A TBF1Q02457 562 aa6.55□□□□□ -1.36
RIM1YCR028C-A LAM6Q08001 693 aa6.55□□□□□ -1.36
RIM1YCR028C-A RAD59Q12223 238 aa6.55□□□□□ -1.36
RIM1YCR028C-A PKC1P24583 1151 aa6.54□□□□□ -1.36
RIM1YCR028C-A CLA4P48562 842 aa6.54□□□□□ -1.36
RIM1YCR028C-A ERG12P07277 443 aa6.53□□□□□ -1.36
RIM1YCR028C-A BRE2P43132 505 aa6.53□□□□□ -1.36
RIM1YCR028C-A KXD1P53158 218 aa6.51□□□□□ -1.37
RIM1YCR028C-A YDL206WQ12424 762 aa6.51□□□□□ -1.37
RIM1YCR028C-A YBL036CP38197 257 aa6.49□□□□□ -1.37
RIM1YCR028C-A RPA14P50106 137 aa6.49□□□□□ -1.37
RIM1YCR028C-A CST6P40535 587 aa6.48□□□□□ -1.37
RIM1YCR028C-A ALR1Q08269 859 aa6.48□□□□□ -1.37
RIM1YCR028C-A PDC1P06169 563 aaKnown RBP6.47□□□□□ -1.37
RIM1YCR028C-A YPR097WQ06839 1073 aa6.47□□□□□ -1.37
RIM1YCR028C-A MOD5P07884 428 aa6.46□□□□□ -1.38
RIM1YCR028C-A CSE4P36012 229 aa6.46□□□□□ -1.38
RIM1YCR028C-A HXT10P43581 546 aa6.46□□□□□ -1.38
RIM1YCR028C-A YJL007CP47080 104 aa6.45□□□□□ -1.38
RIM1YCR028C-A GCR2Q01722 534 aa6.45□□□□□ -1.38
RIM1YCR028C-A FRK1Q03002 865 aaPredicted RBP6.45□□□□□ -1.38
RIM1YCR028C-A BDP1P46678 594 aa6.44□□□□□ -1.38
RIM1YCR028C-A MAK16P10962 306 aaPredicted RBP6.42□□□□□ -1.38
RIM1YCR028C-A TPD3P31383 635 aa6.42□□□□□ -1.38
RIM1YCR028C-A BIM1P40013 344 aa6.41□□□□□ -1.38
RIM1YCR028C-A PUS5Q06244 254 aa6.41□□□□□ -1.38
RIM1YCR028C-A RRD1P40454 393 aaKnown RBP6.4□□□□□ -1.38
RIM1YCR028C-A YDJ1P25491 409 aaKnown RBP6.39□□□□□ -1.39
RIM1YCR028C-A ATG32P40458 529 aa6.38□□□□□ -1.39
RIM1YCR028C-A YNL108CP53929 270 aa6.38□□□□□ -1.39
RIM1YCR028C-A KIP2P28743 706 aa6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms