RNA–Protein interactions for RNA: YBR283C

SSH1, Transcript of Subunit of the Ssh1 translocon complex, yeastyeast

Gene SSH1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH1YBR283C BBC1P47068 1157 aa5.69□□□□□ -1.5
SSH1YBR283C SRB8P25648 1427 aa5.68□□□□□ -1.5
SSH1YBR283C AI2P03876 854 aa5.67□□□□□ -1.5
SSH1YBR283C YOR093CQ12275 1648 aa5.67□□□□□ -1.5
SSH1YBR283C BCH2P36122 765 aa5.65□□□□□ -1.5
SSH1YBR283C ENP1P38333 483 aaKnown RBP5.65□□□□□ -1.5
SSH1YBR283C PSD2P53037 1138 aaKnown RBP5.64□□□□□ -1.51
SSH1YBR283C BUD21Q08492 214 aaPredicted RBP5.64□□□□□ -1.51
SSH1YBR283C POL5P39985 1022 aaKnown RBP5.64□□□□□ -1.51
SSH1YBR283C YFR006WP43590 535 aa5.62□□□□□ -1.51
SSH1YBR283C CST9Q06032 482 aa5.62□□□□□ -1.51
SSH1YBR283C LEO1P38439 464 aa5.61□□□□□ -1.51
SSH1YBR283C YAP3P38749 330 aa5.61□□□□□ -1.51
SSH1YBR283C DNF3Q12674 1656 aa5.61□□□□□ -1.51
SSH1YBR283C BMT6Q12291 365 aa5.6□□□□□ -1.51
SSH1YBR283C SEC3P33332 1336 aaKnown RBP5.6□□□□□ -1.51
SSH1YBR283C TYS1P36421 394 aaKnown RBP5.58□□□□□ -1.52
SSH1YBR283C VMR1P38735 1592 aa5.57□□□□□ -1.52
SSH1YBR283C EPS1P40557 701 aa5.57□□□□□ -1.52
SSH1YBR283C YOR238WQ08634 303 aa5.57□□□□□ -1.52
SSH1YBR283C NUP188P52593 1655 aaKnown RBP5.56□□□□□ -1.52
SSH1YBR283C PDR5P33302 1511 aaKnown RBP5.55□□□□□ -1.52
SSH1YBR283C IPL1P38991 367 aa5.55□□□□□ -1.52
SSH1YBR283C URN1Q06525 465 aaKnown RBP5.55□□□□□ -1.52
SSH1YBR283C WSC3Q12215 556 aa5.55□□□□□ -1.52
SSH1YBR283C SPT7P35177 1332 aa5.55□□□□□ -1.52
SSH1YBR283C MAK10Q02197 733 aa5.54□□□□□ -1.52
SSH1YBR283C LEU3P08638 886 aa5.53□□□□□ -1.52
SSH1YBR283C IML1P47170 1584 aa5.53□□□□□ -1.52
SSH1YBR283C PDR11P40550 1411 aa5.52□□□□□ -1.53
SSH1YBR283C USO1P25386 1790 aa5.52□□□□□ -1.53
SSH1YBR283C BDF1P35817 686 aa5.51□□□□□ -1.53
SSH1YBR283C GCN2P15442 1659 aa5.51□□□□□ -1.53
SSH1YBR283C MRM1P25270 412 aa5.5□□□□□ -1.53
SSH1YBR283C PRS1P32895 427 aaKnown RBP5.5□□□□□ -1.53
SSH1YBR283C TIF11P38912 153 aaKnown RBP5.5□□□□□ -1.53
SSH1YBR283C RTG3P38165 486 aa5.48□□□□□ -1.53
SSH1YBR283C RAM2P29703 316 aa5.47□□□□□ -1.53
SSH1YBR283C YLR419WQ06698 1435 aaKnown RBP5.47□□□□□ -1.53
SSH1YBR283C SET1P38827 1080 aaKnown RBP5.45□□□□□ -1.54
SSH1YBR283C LDB19Q12502 818 aa5.45□□□□□ -1.54
SSH1YBR283C PAF1P38351 445 aa5.44□□□□□ -1.54
SSH1YBR283C THI12P42883 340 aa5.44□□□□□ -1.54
SSH1YBR283C THI5P43534 340 aa5.44□□□□□ -1.54
SSH1YBR283C THI11P47183 340 aa5.44□□□□□ -1.54
SSH1YBR283C THI13Q07748 340 aa5.44□□□□□ -1.54
SSH1YBR283C KRE5P22023 1365 aa5.43□□□□□ -1.54
SSH1YBR283C MAK11P20484 414 aaKnown RBP5.43□□□□□ -1.54
SSH1YBR283C MHP1P43638 1398 aa5.43□□□□□ -1.54
SSH1YBR283C RGA1P39083 1007 aa5.42□□□□□ -1.54
SSH1YBR283C RIA1P53893 1110 aa5.42□□□□□ -1.54
SSH1YBR283C NOP7P53261 605 aaKnown RBP5.41□□□□□ -1.54
SSH1YBR283C RAV1P47104 1357 aa5.41□□□□□ -1.54
SSH1YBR283C HAP1P0CE41 1502 aa5.41□□□□□ -1.54
SSH1YBR283C CAB1Q04430 367 aa5.4□□□□□ -1.54
SSH1YBR283C YPR148CQ06523 435 aa5.4□□□□□ -1.54
SSH1YBR283C RAD9P14737 1309 aa5.4□□□□□ -1.55
SSH1YBR283C NUP192P47054 1683 aa5.4□□□□□ -1.55
SSH1YBR283C MRX12P47084 519 aa5.39□□□□□ -1.55
SSH1YBR283C TY3B-IQ7LHG5 1498 aaKnown RBP5.39□□□□□ -1.55
SSH1YBR283C TY1B-NL2Q99337 1749 aaKnown RBP5.39□□□□□ -1.55
SSH1YBR283C RCR1P38212 213 aa5.39□□□□□ -1.55
SSH1YBR283C NOP53Q12080 455 aaKnown RBP5.39□□□□□ -1.55
SSH1YBR283C RTC1Q08281 1341 aa5.38□□□□□ -1.55
SSH1YBR283C SPB4P25808 606 aaPredicted RBP5.38□□□□□ -1.55
SSH1YBR283C TAF5P38129 798 aa5.38□□□□□ -1.55
SSH1YBR283C RPN1P38764 993 aaKnown RBP5.38□□□□□ -1.55
SSH1YBR283C YMR196WQ04336 1088 aa5.38□□□□□ -1.55
SSH1YBR283C BCK1Q01389 1478 aa5.37□□□□□ -1.55
SSH1YBR283C ALD4P46367 519 aaKnown RBP5.37□□□□□ -1.55
SSH1YBR283C VPS70P47161 811 aa5.37□□□□□ -1.55
SSH1YBR283C YMR1P47147 688 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SSH1YBR283C CFT1Q06632 1357 aaKnown RBP5.35□□□□□ -1.55
SSH1YBR283C VPS29P38759 282 aa5.35□□□□□ -1.55
SSH1YBR283C YNR029CP53729 429 aaKnown RBP5.35□□□□□ -1.55
SSH1YBR283C ORC1P54784 914 aaPredicted RBP5.35□□□□□ -1.55
SSH1YBR283C IOC2Q12072 812 aa5.33□□□□□ -1.56
SSH1YBR283C COQ8P27697 501 aa5.32□□□□□ -1.56
SSH1YBR283C YAP5P40574 245 aa5.32□□□□□ -1.56
SSH1YBR283C TAF8Q03750 510 aa5.32□□□□□ -1.56
SSH1YBR283C ULI1P43604 169 aa5.32□□□□□ -1.56
SSH1YBR283C ESL2P36168 1195 aa5.31□□□□□ -1.56
SSH1YBR283C RCM1P53972 490 aa5.3□□□□□ -1.56
SSH1YBR283C PDS5Q04264 1277 aa5.3□□□□□ -1.56
SSH1YBR283C KIP3P53086 805 aaKnown RBP5.29□□□□□ -1.56
SSH1YBR283C IME2P32581 645 aa5.28□□□□□ -1.56
SSH1YBR283C BCK2P33306 851 aa5.28□□□□□ -1.56
SSH1YBR283C DSF2P38213 736 aa5.28□□□□□ -1.56
SSH1YBR283C APP1P53933 587 aa5.28□□□□□ -1.56
SSH1YBR283C PBS2P08018 668 aa5.27□□□□□ -1.57
SSH1YBR283C DBP1P24784 617 aaKnown RBP5.27□□□□□ -1.57
SSH1YBR283C PPH3P32345 308 aa5.27□□□□□ -1.57
SSH1YBR283C RPP0P05317 312 aaKnown RBP5.26□□□□□ -1.57
SSH1YBR283C SPE2P21182 396 aa5.26□□□□□ -1.57
SSH1YBR283C OPY1P38271 328 aa5.26□□□□□ -1.57
SSH1YBR283C NAP1P25293 417 aaKnown RBP5.26□□□□□ -1.57
SSH1YBR283C STS1P38637 319 aa5.26□□□□□ -1.57
SSH1YBR283C NST1P53935 1240 aa5.26□□□□□ -1.57
SSH1YBR283C IOC4Q04213 475 aa5.26□□□□□ -1.57
SSH1YBR283C MLP1Q02455 1875 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms