RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C GLN1P32288 370 aaKnown RBP5.71□□□□□ -1.5
SHG1YBR258C NUD1P32336 851 aa5.71□□□□□ -1.5
SHG1YBR258C SPT23P35210 1082 aa5.71□□□□□ -1.5
SHG1YBR258C YMR196WQ04336 1088 aa5.71□□□□□ -1.5
SHG1YBR258C TCB3Q03640 1545 aaKnown RBP5.7□□□□□ -1.5
SHG1YBR258C PRE3P38624 215 aa5.7□□□□□ -1.5
SHG1YBR258C TFB3Q03290 321 aa5.7□□□□□ -1.5
SHG1YBR258C PDR1P12383 1068 aa5.69□□□□□ -1.5
SHG1YBR258C MMP1Q12372 583 aa5.69□□□□□ -1.5
SHG1YBR258C BRL1P38770 471 aa5.68□□□□□ -1.5
SHG1YBR258C STR2P47164 639 aa5.68□□□□□ -1.5
SHG1YBR258C YNL115CP53925 644 aa5.68□□□□□ -1.5
SHG1YBR258C ELP4Q02884 456 aaKnown RBP5.68□□□□□ -1.5
SHG1YBR258C YML082WQ04533 649 aaKnown RBP5.68□□□□□ -1.5
SHG1YBR258C TYW1Q08960 810 aaKnown RBP5.68□□□□□ -1.5
SHG1YBR258C CHL1P22516 861 aaPredicted RBP5.67□□□□□ -1.5
SHG1YBR258C YJL171CP46992 396 aa5.67□□□□□ -1.5
SHG1YBR258C ISM1P48526 1002 aa5.67□□□□□ -1.5
SHG1YBR258C REV3P14284 1504 aa5.66□□□□□ -1.5
SHG1YBR258C PTC2P39966 464 aaKnown RBP5.66□□□□□ -1.5
SHG1YBR258C TY1A-DR4O74302 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-HP0C2I4 478 aaKnown RBP5.65□□□□□ -1.5
SHG1YBR258C TY1A-AP0CX57 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-PR1P0CX58 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-ORP0CX59 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-PR2P0CX60 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-DR5P0CX65 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-ER2P0CX66 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-GR3P0CX67 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-LR1P0CX68 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-MR2P0CX69 440 aa5.65□□□□□ -1.5
SHG1YBR258C ESS1P22696 170 aa5.65□□□□□ -1.5
SHG1YBR258C SCJ1P25303 377 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-JR2P47099 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-DR1Q03856 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-ML1Q04706 440 aaKnown RBP5.65□□□□□ -1.5
SHG1YBR258C TY1A-BRQ12217 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-NL2Q12470 440 aa5.65□□□□□ -1.5
SHG1YBR258C TY1A-GR2Q12485 440 aa5.65□□□□□ -1.5
SHG1YBR258C YPR015CQ12531 247 aa5.65□□□□□ -1.5
SHG1YBR258C KEX2P13134 814 aa5.64□□□□□ -1.51
SHG1YBR258C RSC30P38781 883 aa5.64□□□□□ -1.51
SHG1YBR258C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
SHG1YBR258C ERF2Q06551 359 aa5.64□□□□□ -1.51
SHG1YBR258C RAD59Q12223 238 aa5.64□□□□□ -1.51
SHG1YBR258C PKC1P24583 1151 aa5.63□□□□□ -1.51
SHG1YBR258C YJU3P28321 313 aa5.63□□□□□ -1.51
SHG1YBR258C NPL4P33755 580 aa5.63□□□□□ -1.51
SHG1YBR258C PKH3Q03306 898 aaPredicted RBP5.63□□□□□ -1.51
SHG1YBR258C AGE1Q04412 482 aa5.63□□□□□ -1.51
SHG1YBR258C LAM6Q08001 693 aa5.63□□□□□ -1.51
SHG1YBR258C BUD20Q08004 166 aaPredicted RBP5.63□□□□□ -1.51
SHG1YBR258C RLF2Q12495 606 aa5.63□□□□□ -1.51
SHG1YBR258C SEC2P17065 759 aa5.62□□□□□ -1.51
SHG1YBR258C SLY41P22215 453 aa5.62□□□□□ -1.51
SHG1YBR258C CSE4P36012 229 aa5.62□□□□□ -1.51
SHG1YBR258C TRM1P15565 570 aaKnown RBP5.6□□□□□ -1.51
SHG1YBR258C PUS6P53294 404 aa5.6□□□□□ -1.51
SHG1YBR258C PRT1P06103 763 aaKnown RBP5.58□□□□□ -1.52
SHG1YBR258C MAK16P10962 306 aaPredicted RBP5.58□□□□□ -1.52
SHG1YBR258C SPT5P27692 1063 aaKnown RBP5.58□□□□□ -1.52
SHG1YBR258C TUB4P53378 473 aa5.58□□□□□ -1.52
SHG1YBR258C ARG8P18544 423 aa5.57□□□□□ -1.52
SHG1YBR258C BIO2P32451 375 aa5.57□□□□□ -1.52
SHG1YBR258C GCD11P32481 527 aaKnown RBP5.57□□□□□ -1.52
SHG1YBR258C YBL036CP38197 257 aa5.57□□□□□ -1.52
SHG1YBR258C SAS4Q04003 481 aa5.57□□□□□ -1.52
SHG1YBR258C BIM1P40013 344 aa5.56□□□□□ -1.52
SHG1YBR258C RPA14P50106 137 aa5.56□□□□□ -1.52
SHG1YBR258C MDS3P53094 1487 aa5.56□□□□□ -1.52
SHG1YBR258C NAF1P53919 492 aaKnown RBP5.55□□□□□ -1.52
SHG1YBR258C PAC1P39946 494 aaKnown RBP5.54□□□□□ -1.52
SHG1YBR258C ATG32P40458 529 aa5.54□□□□□ -1.52
SHG1YBR258C YJL007CP47080 104 aa5.54□□□□□ -1.52
SHG1YBR258C TBF1Q02457 562 aa5.54□□□□□ -1.52
SHG1YBR258C YPR097WQ06839 1073 aa5.54□□□□□ -1.52
SHG1YBR258C SUP45P12385 437 aaKnown RBP5.53□□□□□ -1.52
SHG1YBR258C TPD3P31383 635 aa5.53□□□□□ -1.52
SHG1YBR258C YDL206WQ12424 762 aa5.53□□□□□ -1.52
SHG1YBR258C BUD4P47136 1447 aa5.52□□□□□ -1.53
SHG1YBR258C RRN7P40992 514 aa5.52□□□□□ -1.53
SHG1YBR258C PDC1P06169 563 aaKnown RBP5.51□□□□□ -1.53
SHG1YBR258C MOD5P07884 428 aa5.51□□□□□ -1.53
SHG1YBR258C TIF1P10081 395 aaKnown RBP5.51□□□□□ -1.53
SHG1YBR258C PAT1P25644 796 aaKnown RBP5.51□□□□□ -1.53
SHG1YBR258C ALR1Q08269 859 aa5.5□□□□□ -1.53
SHG1YBR258C SDH2P21801 266 aa5.49□□□□□ -1.53
SHG1YBR258C KXD1P53158 218 aa5.49□□□□□ -1.53
SHG1YBR258C GYP1Q08484 637 aa5.49□□□□□ -1.53
SHG1YBR258C SPT6P23615 1451 aaKnown RBP5.49□□□□□ -1.53
SHG1YBR258C SPT16P32558 1035 aaKnown RBP5.48□□□□□ -1.53
SHG1YBR258C BCK2P33306 851 aa5.48□□□□□ -1.53
SHG1YBR258C VRP1P37370 817 aa5.48□□□□□ -1.53
SHG1YBR258C RRD1P40454 393 aaKnown RBP5.48□□□□□ -1.53
SHG1YBR258C RPL34BP40525 121 aaKnown RBP5.48□□□□□ -1.53
SHG1YBR258C HXT10P43581 546 aa5.48□□□□□ -1.53
SHG1YBR258C RIM21P48565 533 aa5.48□□□□□ -1.53
SHG1YBR258C BPT1P14772 1559 aa5.47□□□□□ -1.53
SHG1YBR258C THO2P53552 1597 aaKnown RBP5.47□□□□□ -1.53
SHG1YBR258C YDJ1P25491 409 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 90.2 ms