RNA–Protein interactions for RNA: YBR140C

IRA1, Transcript of GTPase-activating protein, yeastyeast

Gene IRA1, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRA1YBR140C FAR11P53917 953 aa2.09□□□□□ -2.07
IRA1YBR140C QCR6P00127 147 aa2.09□□□□□ -2.07
IRA1YBR140C ECM16Q04217 1267 aaKnown RBP2.09□□□□□ -2.08
IRA1YBR140C BNR1P40450 1375 aa2.08□□□□□ -2.08
IRA1YBR140C SWE1P32944 819 aa2.08□□□□□ -2.08
IRA1YBR140C PDR18P53756 1333 aa2.07□□□□□ -2.08
IRA1YBR140C TY4B-HP0C2J7 1802 aa2.07□□□□□ -2.08
IRA1YBR140C TY4B-JP47024 1803 aa2.07□□□□□ -2.08
IRA1YBR140C SAS10Q12136 610 aaPredicted RBP2.07□□□□□ -2.08
IRA1YBR140C SAC3P46674 1301 aa2.06□□□□□ -2.08
IRA1YBR140C LSP1Q12230 341 aaKnown RBP2.06□□□□□ -2.08
IRA1YBR140C DRS2P39524 1355 aa2.06□□□□□ -2.08
IRA1YBR140C KRE5P22023 1365 aa2.06□□□□□ -2.08
IRA1YBR140C PIL1P53252 339 aaKnown RBP2.06□□□□□ -2.08
IRA1YBR140C URN1Q06525 465 aaKnown RBP2.06□□□□□ -2.08
IRA1YBR140C HYR1P40581 163 aaKnown RBP2.05□□□□□ -2.08
IRA1YBR140C RSF2P46974 1380 aa2.05□□□□□ -2.08
IRA1YBR140C ENV11P53246 860 aa2.05□□□□□ -2.08
IRA1YBR140C TCB2P48231 1178 aa2.05□□□□□ -2.08
IRA1YBR140C AIM44Q99299 758 aa2.05□□□□□ -2.08
IRA1YBR140C POL5P39985 1022 aaKnown RBP2.05□□□□□ -2.08
IRA1YBR140C NOP2P40991 618 aaKnown RBP2.05□□□□□ -2.08
IRA1YBR140C BUD27P43573 796 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
IRA1YBR140C DUR1,2P32528 1835 aaKnown RBP2.04□□□□□ -2.08
IRA1YBR140C RPO41P13433 1351 aaKnown RBP2.04□□□□□ -2.08
IRA1YBR140C EBP2P36049 427 aaKnown RBP2.04□□□□□ -2.08
IRA1YBR140C PRP43P53131 767 aaKnown RBP2.04□□□□□ -2.08
IRA1YBR140C NUP157P40064 1391 aaKnown RBP2.04□□□□□ -2.08
IRA1YBR140C BNI1P41832 1953 aa2.04□□□□□ -2.08
IRA1YBR140C SSM4P40318 1319 aa2.03□□□□□ -2.08
IRA1YBR140C TAP42Q04372 366 aa2.03□□□□□ -2.08
IRA1YBR140C RAD50P12753 1312 aa2.02□□□□□ -2.09
IRA1YBR140C ADE6P38972 1358 aaKnown RBP2.02□□□□□ -2.09
IRA1YBR140C NPL4P33755 580 aa2.02□□□□□ -2.09
IRA1YBR140C CDC45Q08032 650 aa2.02□□□□□ -2.09
IRA1YBR140C CTF4Q01454 927 aa2.02□□□□□ -2.09
IRA1YBR140C SNF7P39929 240 aaKnown RBP2.02□□□□□ -2.09
IRA1YBR140C YRF1-3P0CX14 1859 aa2.02□□□□□ -2.09
IRA1YBR140C YRF1-7P0CX15 1859 aa2.02□□□□□ -2.09
IRA1YBR140C YRF1-6P53819 1859 aa2.02□□□□□ -2.09
IRA1YBR140C ESL2P36168 1195 aa2.02□□□□□ -2.09
IRA1YBR140C YML119WQ03208 357 aa2.02□□□□□ -2.09
IRA1YBR140C TAF13P11747 167 aa2.01□□□□□ -2.09
IRA1YBR140C DAL5P15365 543 aa2.01□□□□□ -2.09
IRA1YBR140C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
IRA1YBR140C MET10P39692 1035 aa2.01□□□□□ -2.09
IRA1YBR140C YNL058CP53947 316 aa2.01□□□□□ -2.09
IRA1YBR140C VPS27P40343 622 aaKnown RBP2.01□□□□□ -2.09
IRA1YBR140C FIG2P25653 1609 aa2□□□□□ -2.09
IRA1YBR140C RIF1P29539 1916 aa2□□□□□ -2.09
IRA1YBR140C PPX1P38698 397 aa2□□□□□ -2.09
IRA1YBR140C PKH1Q03407 766 aa2□□□□□ -2.09
IRA1YBR140C RAD3P06839 778 aa2□□□□□ -2.09
IRA1YBR140C RPC82P32349 654 aa2□□□□□ -2.09
IRA1YBR140C FKS1P38631 1876 aaKnown RBP2□□□□□ -2.09
IRA1YBR140C GRX4P32642 244 aa1.99□□□□□ -2.09
IRA1YBR140C GEF1P37020 779 aa1.99□□□□□ -2.09
IRA1YBR140C FPR3P38911 411 aaKnown RBP1.99□□□□□ -2.09
IRA1YBR140C ASF1P32447 279 aa1.99□□□□□ -2.09
IRA1YBR140C PES4P39684 611 aa1.99□□□□□ -2.09
IRA1YBR140C YGR130CP53278 816 aa1.99□□□□□ -2.09
IRA1YBR140C MRD1Q06106 887 aaKnown RBP1.99□□□□□ -2.09
IRA1YBR140C MPE1P35728 441 aaKnown RBP1.99□□□□□ -2.09
IRA1YBR140C NAP1P25293 417 aaKnown RBP1.98□□□□□ -2.09
IRA1YBR140C PXA1P41909 870 aa1.98□□□□□ -2.09
IRA1YBR140C RAD9P14737 1309 aa1.98□□□□□ -2.09
IRA1YBR140C PAF1P38351 445 aa1.98□□□□□ -2.09
IRA1YBR140C TOP1P04786 769 aa1.98□□□□□ -2.09
IRA1YBR140C YJR008WP47085 338 aa1.98□□□□□ -2.09
IRA1YBR140C NOP53Q12080 455 aaKnown RBP1.98□□□□□ -2.09
IRA1YBR140C VPS41P38959 992 aa1.97□□□□□ -2.09
IRA1YBR140C NOT3P06102 836 aaKnown RBP1.97□□□□□ -2.09
IRA1YBR140C PSR1Q07800 427 aa1.97□□□□□ -2.09
IRA1YBR140C ETT1Q08421 412 aaKnown RBP1.97□□□□□ -2.09
IRA1YBR140C ELM1P32801 640 aa1.97□□□□□ -2.09
IRA1YBR140C PRS1P32895 427 aaKnown RBP1.97□□□□□ -2.09
IRA1YBR140C SPC110P32380 944 aa1.97□□□□□ -2.09
IRA1YBR140C RPS9BP05755 195 aaKnown RBP1.97□□□□□ -2.09
IRA1YBR140C VPS8P39702 1274 aa1.96□□□□□ -2.09
IRA1YBR140C HKR1P41809 1802 aa1.96□□□□□ -2.1
IRA1YBR140C PLP2Q12017 286 aa1.96□□□□□ -2.1
IRA1YBR140C PET111P08468 800 aa1.96□□□□□ -2.1
IRA1YBR140C CWC22P53333 577 aaKnown RBP1.96□□□□□ -2.1
IRA1YBR140C NOP14Q99207 810 aaKnown RBP1.96□□□□□ -2.1
IRA1YBR140C ERV41Q04651 352 aa1.96□□□□□ -2.1
IRA1YBR140C TOA1P32773 286 aa1.96□□□□□ -2.1
IRA1YBR140C FPR4Q06205 392 aaPredicted RBP1.95□□□□□ -2.1
IRA1YBR140C UTP18P40362 594 aaPredicted RBP1.95□□□□□ -2.1
IRA1YBR140C RPL22BP56628 122 aaKnown RBP1.95□□□□□ -2.1
IRA1YBR140C PMD1P32634 1753 aa1.95□□□□□ -2.1
IRA1YBR140C TPS3P38426 1054 aaKnown RBP1.95□□□□□ -2.1
IRA1YBR140C FUN12P39730 1002 aaKnown RBP1.95□□□□□ -2.1
IRA1YBR140C DOT5P40553 215 aa1.95□□□□□ -2.1
IRA1YBR140C FKH1P40466 484 aa1.95□□□□□ -2.1
IRA1YBR140C MYO1P08964 1928 aa1.95□□□□□ -2.1
IRA1YBR140C SPT21P35209 758 aa1.95□□□□□ -2.1
IRA1YBR140C MAM1P40065 302 aa1.95□□□□□ -2.1
IRA1YBR140C SSK22P25390 1331 aaPredicted RBP1.94□□□□□ -2.1
IRA1YBR140C RAD2P07276 1031 aa1.94□□□□□ -2.1
IRA1YBR140C YNL050CP53952 270 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms