RNA–Protein interactions for RNA: YBR107C

IML3, Transcript of Outer kinetochore protein and component of the Ctf19 complex, yeast

Gene IML3, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IML3	YBR107C	PPH3	P32345	308 aa		11.91	□□□□□ -0.5
IML3	YBR107C	APP1	P53933	587 aa		11.89	□□□□□ -0.51
IML3	YBR107C	PSK1	P31374	1356 aa		11.87	□□□□□ -0.51
IML3	YBR107C	POL5	P39985	1022 aa	Known RBP	11.86	□□□□□ -0.51
IML3	YBR107C	ENT1	Q12518	454 aa		11.86	□□□□□ -0.51
IML3	YBR107C	YLR419W	Q06698	1435 aa	Known RBP	11.86	□□□□□ -0.51
IML3	YBR107C	REB1	P21538	810 aa		11.84	□□□□□ -0.51
IML3	YBR107C	PRP45	P28004	379 aa	Predicted RBP	11.84	□□□□□ -0.51
IML3	YBR107C	LEU2	P04173	364 aa	Predicted RBP	11.83	□□□□□ -0.52
IML3	YBR107C	PRP5	P21372	849 aa	Predicted RBP	11.8	□□□□□ -0.52
IML3	YBR107C	YIL055C	P40523	627 aa	Known RBP	11.8	□□□□□ -0.52
IML3	YBR107C	MTR4	P47047	1073 aa	Known RBP	11.8	□□□□□ -0.52
IML3	YBR107C	ENV9	Q08651	330 aa		11.8	□□□□□ -0.52
IML3	YBR107C	ADE6	P38972	1358 aa	Known RBP	11.78	□□□□□ -0.52
IML3	YBR107C	CSE4	P36012	229 aa		11.76	□□□□□ -0.53
IML3	YBR107C	PRP43	P53131	767 aa	Known RBP	11.76	□□□□□ -0.53
IML3	YBR107C	FKH1	P40466	484 aa		11.73	□□□□□ -0.53
IML3	YBR107C	IMH1	Q06704	911 aa	Known RBP	11.73	□□□□□ -0.53
IML3	YBR107C	RPS24A	P0CX31	135 aa	Known RBP	11.72	□□□□□ -0.53
IML3	YBR107C	RPS24B	P0CX32	135 aa	Known RBP	11.72	□□□□□ -0.53
IML3	YBR107C	GLN1	P32288	370 aa	Known RBP	11.71	□□□□□ -0.53
IML3	YBR107C	MHP1	P43638	1398 aa		11.69	□□□□□ -0.54
IML3	YBR107C	RTG3	P38165	486 aa		11.69	□□□□□ -0.54
IML3	YBR107C	MSB3	P48566	633 aa	Predicted RBP	11.69	□□□□□ -0.54
IML3	YBR107C	PDS5	Q04264	1277 aa		11.69	□□□□□ -0.54
IML3	YBR107C	TCB1	Q12466	1186 aa		11.68	□□□□□ -0.54
IML3	YBR107C	RRP5	Q05022	1729 aa	Known RBP	11.68	□□□□□ -0.54
IML3	YBR107C	RTF1	P53064	558 aa		11.67	□□□□□ -0.54
IML3	YBR107C	PDI1	P17967	522 aa	Known RBP	11.66	□□□□□ -0.54
IML3	YBR107C	SLM3	Q12093	417 aa		11.66	□□□□□ -0.54
IML3	YBR107C	YML133C	Q03099	1374 aa		11.66	□□□□□ -0.54
IML3	YBR107C	YLL067C	Q07888	1374 aa		11.66	□□□□□ -0.54
IML3	YBR107C	YLL066C	Q99208	1374 aa		11.66	□□□□□ -0.54
IML3	YBR107C	LEU3	P08638	886 aa		11.64	□□□□□ -0.55
IML3	YBR107C	YMR074C	Q04773	145 aa		11.64	□□□□□ -0.55
IML3	YBR107C	IES2	P40154	320 aa		11.62	□□□□□ -0.55
IML3	YBR107C	ENP1	P38333	483 aa	Known RBP	11.61	□□□□□ -0.55
IML3	YBR107C	TY4B-H	P0C2J7	1802 aa		11.6	□□□□□ -0.55
IML3	YBR107C	TY4B-J	P47024	1803 aa		11.6	□□□□□ -0.55
IML3	YBR107C	GRX4	P32642	244 aa		11.6	□□□□□ -0.55
IML3	YBR107C	TAP42	Q04372	366 aa		11.6	□□□□□ -0.55
IML3	YBR107C	GAS4	Q08271	471 aa		11.6	□□□□□ -0.55
IML3	YBR107C	DPS1	P04802	557 aa	Known RBP	11.59	□□□□□ -0.55
IML3	YBR107C	RSF2	P46974	1380 aa		11.58	□□□□□ -0.56
IML3	YBR107C	XKS1	P42826	600 aa		11.56	□□□□□ -0.56
IML3	YBR107C	MLP1	Q02455	1875 aa	Known RBP	11.55	□□□□□ -0.56
IML3	YBR107C	YEF3	P16521	1044 aa	Known RBP	11.54	□□□□□ -0.56
IML3	YBR107C	YRF1-2	P40105	1681 aa		11.54	□□□□□ -0.56
IML3	YBR107C	PRI1	P10363	409 aa		11.53	□□□□□ -0.56
IML3	YBR107C	ROM2	P51862	1356 aa	Known RBP	11.53	□□□□□ -0.56
IML3	YBR107C	KAR2	P16474	682 aa	Known RBP	11.52	□□□□□ -0.57
IML3	YBR107C	DOT5	P40553	215 aa		11.52	□□□□□ -0.57
IML3	YBR107C	YKL133C	P36066	463 aa		11.51	□□□□□ -0.57
IML3	YBR107C	HIM1	Q06674	414 aa		11.51	□□□□□ -0.57
IML3	YBR107C	UBP1	P25037	809 aa		11.5	□□□□□ -0.57
IML3	YBR107C	SEC3	P33332	1336 aa	Known RBP	11.5	□□□□□ -0.57
IML3	YBR107C	RPN11	P43588	306 aa	Known RBP	11.48	□□□□□ -0.57
IML3	YBR107C	YJL181W	P46987	611 aa		11.48	□□□□□ -0.57
IML3	YBR107C	MEC3	Q02574	474 aa		11.48	□□□□□ -0.57
IML3	YBR107C	AUS1	Q08409	1394 aa		11.48	□□□□□ -0.57
IML3	YBR107C	BUD31	P25337	157 aa	Predicted RBP	11.47	□□□□□ -0.57
IML3	YBR107C	LAM6	Q08001	693 aa		11.47	□□□□□ -0.57
IML3	YBR107C	RCR1	P38212	213 aa		11.46	□□□□□ -0.57
IML3	YBR107C	FOX2	Q02207	900 aa	Known RBP	11.46	□□□□□ -0.57
IML3	YBR107C	PSD2	P53037	1138 aa	Known RBP	11.45	□□□□□ -0.58
IML3	YBR107C	PAP2	P53632	584 aa	Known RBP	11.45	□□□□□ -0.58
IML3	YBR107C	PRP40	P33203	583 aa	Known RBP	11.43	□□□□□ -0.58
IML3	YBR107C	EDE1	P34216	1381 aa		11.42	□□□□□ -0.58
IML3	YBR107C	URB1	P34241	1764 aa	Known RBP	11.42	□□□□□ -0.58
IML3	YBR107C	COB	P00163	385 aa		11.42	□□□□□ -0.58
IML3	YBR107C	SIR4	P11978	1358 aa		11.41	□□□□□ -0.58
IML3	YBR107C	RPO41	P13433	1351 aa	Known RBP	11.41	□□□□□ -0.58
IML3	YBR107C	TRK1	P12685	1235 aa		11.41	□□□□□ -0.58
IML3	YBR107C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.41	□□□□□ -0.58	not detected
IML3	YBR107C	NST1	P53935	1240 aa		11.41	□□□□□ -0.58
IML3	YBR107C	AVT3	P36062	692 aa		11.4	□□□□□ -0.58
IML3	YBR107C	DSD1	P53095	428 aa		11.38	□□□□□ -0.59
IML3	YBR107C	ATG13	Q06628	738 aa		11.38	□□□□□ -0.59
IML3	YBR107C	YRF1-4	O13559	1382 aa		11.38	□□□□□ -0.59
IML3	YBR107C	APC1	P53886	1748 aa		11.38	□□□□□ -0.59
IML3	YBR107C	ADE16	P54113	591 aa	Known RBP	11.37	□□□□□ -0.59
IML3	YBR107C	CTF4	Q01454	927 aa		11.37	□□□□□ -0.59
IML3	YBR107C	FRK1	Q03002	865 aa	Predicted RBP	11.37	□□□□□ -0.59
IML3	YBR107C	FKS3	Q04952	1785 aa		11.36	□□□□□ -0.59
IML3	YBR107C	YKR075C	P36155	307 aa		11.36	□□□□□ -0.59
IML3	YBR107C	NPR2	P39923	615 aa		11.36	□□□□□ -0.59
IML3	YBR107C	YIL177C	P40434	1758 aa		11.36	□□□□□ -0.59
IML3	YBR107C	YJL225C	P40889	1758 aa		11.36	□□□□□ -0.59
IML3	YBR107C	YRF1-3	P0CX14	1859 aa		11.36	□□□□□ -0.59
IML3	YBR107C	YRF1-7	P0CX15	1859 aa		11.36	□□□□□ -0.59
IML3	YBR107C	YRF1-6	P53819	1859 aa		11.36	□□□□□ -0.59
IML3	YBR107C	SPT7	P35177	1332 aa		11.35	□□□□□ -0.59
IML3	YBR107C	HSP104	P31539	908 aa	Known RBP	11.35	□□□□□ -0.59
IML3	YBR107C	AKL1	P38080	1108 aa	Known RBP	11.35	□□□□□ -0.59
IML3	YBR107C	GTT3	P39996	337 aa		11.34	□□□□□ -0.59
IML3	YBR107C	IOC4	Q04213	475 aa		11.33	□□□□□ -0.6
IML3	YBR107C	INP54	Q08227	384 aa	Known RBP	11.33	□□□□□ -0.6
IML3	YBR107C	OSM1	P21375	501 aa	Known RBP	11.32	□□□□□ -0.6
IML3	YBR107C	UGA2	P38067	497 aa		11.32	□□□□□ -0.6
IML3	YBR107C	ALD2	P47771	506 aa		11.32	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms