RNA–Protein interactions for RNA: YBR005W

RCR1, Transcript of Protein of the ER membrane involved in cell wall chitin deposition, yeastyeast

Gene RCR1, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCR1YBR005W NOP7P53261 605 aaKnown RBP11.55□□□□□ -0.56
RCR1YBR005W BUD31P25337 157 aaPredicted RBP11.54□□□□□ -0.56
RCR1YBR005W TY3B-IQ7LHG5 1498 aaKnown RBP11.54□□□□□ -0.56
RCR1YBR005W LEU3P08638 886 aa11.53□□□□□ -0.56
RCR1YBR005W PRP45P28004 379 aaPredicted RBP11.53□□□□□ -0.56
RCR1YBR005W CPS1P27614 576 aa11.47□□□□□ -0.57
RCR1YBR005W ESL2P36168 1195 aa11.46□□□□□ -0.57
RCR1YBR005W EDE1P34216 1381 aa11.45□□□□□ -0.58
RCR1YBR005W PRP5P21372 849 aaPredicted RBP11.44□□□□□ -0.58
RCR1YBR005W GTT3P39996 337 aa11.44□□□□□ -0.58
RCR1YBR005W TAF8Q03750 510 aa11.42□□□□□ -0.58
RCR1YBR005W UGA2P38067 497 aa11.41□□□□□ -0.58
RCR1YBR005W RCM1P53972 490 aa11.39□□□□□ -0.59
RCR1YBR005W YJL181WP46987 611 aa11.38□□□□□ -0.59
RCR1YBR005W TY4B-HP0C2J7 1802 aa11.37□□□□□ -0.59
RCR1YBR005W TY4B-JP47024 1803 aa11.37□□□□□ -0.59
RCR1YBR005W YEF3P16521 1044 aaKnown RBP11.36□□□□□ -0.59
RCR1YBR005W YBL086CP38177 466 aa11.35□□□□□ -0.59
RCR1YBR005W RPN11P43588 306 aaKnown RBP11.35□□□□□ -0.59
RCR1YBR005W URB1P34241 1764 aaKnown RBP11.34□□□□□ -0.59
RCR1YBR005W ROM2P51862 1356 aaKnown RBP11.34□□□□□ -0.59
RCR1YBR005W IES2P40154 320 aa11.34□□□□□ -0.59
RCR1YBR005W ALD2P47771 506 aa11.33□□□□□ -0.6
RCR1YBR005W TCB1Q12466 1186 aa11.33□□□□□ -0.6
RCR1YBR005W PSK1P31374 1356 aa11.3□□□□□ -0.6
RCR1YBR005W SCT1P32784 759 aa11.3□□□□□ -0.6
RCR1YBR005W DOT5P40553 215 aa11.3□□□□□ -0.6
RCR1YBR005W MSB3P48566 633 aaPredicted RBP11.3□□□□□ -0.6
RCR1YBR005W LAM6Q08001 693 aa11.3□□□□□ -0.6
RCR1YBR005W PPH3P32345 308 aa11.29□□□□□ -0.6
RCR1YBR005W PRP40P33203 583 aaKnown RBP11.29□□□□□ -0.6
RCR1YBR005W ADE6P38972 1358 aaKnown RBP11.28□□□□□ -0.6
RCR1YBR005W SSA1P10591 642 aaKnown RBP11.28□□□□□ -0.6
RCR1YBR005W ENP1P38333 483 aaKnown RBP11.28□□□□□ -0.6
RCR1YBR005W RSF2P46974 1380 aa11.27□□□□□ -0.61
RCR1YBR005W SSA2P10592 639 aaKnown RBP11.24□□□□□ -0.61
RCR1YBR005W SLM3Q12093 417 aa11.24□□□□□ -0.61
RCR1YBR005W LEU2P04173 364 aaPredicted RBP11.23□□□□□ -0.61
RCR1YBR005W MTR4P47047 1073 aaKnown RBP11.23□□□□□ -0.61
RCR1YBR005W FKS3Q04952 1785 aa11.23□□□□□ -0.61
RCR1YBR005W SPE2P21182 396 aa11.22□□□□□ -0.61
RCR1YBR005W YRF1-3P0CX14 1859 aa11.21□□□□□ -0.61
RCR1YBR005W YRF1-7P0CX15 1859 aa11.21□□□□□ -0.61
RCR1YBR005W YRF1-6P53819 1859 aa11.21□□□□□ -0.61
RCR1YBR005W FOX2Q02207 900 aaKnown RBP11.21□□□□□ -0.61
RCR1YBR005W NPR2P39923 615 aa11.2□□□□□ -0.62
RCR1YBR005W PRP43P53131 767 aaKnown RBP11.2□□□□□ -0.62
RCR1YBR005W CSE4P36012 229 aa11.19□□□□□ -0.62
RCR1YBR005W LYS4P49367 693 aaPredicted RBP11.19□□□□□ -0.62
RCR1YBR005W YKL133CP36066 463 aa11.18□□□□□ -0.62
RCR1YBR005W SPT7P35177 1332 aa11.17□□□□□ -0.62
RCR1YBR005W KIP3P53086 805 aaKnown RBP11.16□□□□□ -0.62
RCR1YBR005W CHZ1P40019 153 aaPredicted RBP11.15□□□□□ -0.62
RCR1YBR005W XKS1P42826 600 aa11.12□□□□□ -0.63
RCR1YBR005W MEC3Q02574 474 aa11.12□□□□□ -0.63
RCR1YBR005W COBP00163 385 aa11.11□□□□□ -0.63
RCR1YBR005W RPS24AP0CX31 135 aaKnown RBP11.11□□□□□ -0.63
RCR1YBR005W RPS24BP0CX32 135 aaKnown RBP11.11□□□□□ -0.63
RCR1YBR005W BDF1P35817 686 aa11.09□□□□□ -0.63
RCR1YBR005W ALD3P54114 506 aa11.09□□□□□ -0.63
RCR1YBR005W YKR075CP36155 307 aa11.08□□□□□ -0.64
RCR1YBR005W CTH1P47976 325 aa11.08□□□□□ -0.64
RCR1YBR005W YRF1-4O13559 1382 aa11.05□□□□□ -0.64
RCR1YBR005W APC1P53886 1748 aa11.05□□□□□ -0.64
RCR1YBR005W RTF1P53064 558 aa11.03□□□□□ -0.64
RCR1YBR005W MSB4Q12317 492 aa11.02□□□□□ -0.65
RCR1YBR005W SNF2P22082 1703 aa11.01□□□□□ -0.65
RCR1YBR005W MLP1Q02455 1875 aaKnown RBP10.98□□□□□ -0.65
RCR1YBR005W RPG1P38249 964 aaKnown RBP10.98□□□□□ -0.65
RCR1YBR005W SAP155P43612 1002 aa10.98□□□□□ -0.65
RCR1YBR005W DPS1P04802 557 aaKnown RBP10.97□□□□□ -0.65
RCR1YBR005W PDI1P17967 522 aaKnown RBP10.97□□□□□ -0.65
RCR1YBR005W ATG13Q06628 738 aa10.97□□□□□ -0.65
RCR1YBR005W BUG1Q12191 341 aa10.97□□□□□ -0.65
RCR1YBR005W YIL177CP40434 1758 aa10.97□□□□□ -0.65
RCR1YBR005W YJL225CP40889 1758 aa10.97□□□□□ -0.65
RCR1YBR005W YLR419WQ06698 1435 aaKnown RBP10.96□□□□□ -0.65
RCR1YBR005W SIR4P11978 1358 aa10.96□□□□□ -0.65
RCR1YBR005W FRK1Q03002 865 aaPredicted RBP10.96□□□□□ -0.65
RCR1YBR005W RCR1P38212 213 aa10.95□□□□□ -0.66
RCR1YBR005W UTP22P53254 1237 aaPredicted RBP10.94□□□□□ -0.66
RCR1YBR005W GAS4Q08271 471 aa10.93□□□□□ -0.66
RCR1YBR005W RIM15P43565 1770 aa10.93□□□□□ -0.66
RCR1YBR005W RAD4P14736 754 aa10.92□□□□□ -0.66
RCR1YBR005W ORC1P54784 914 aaPredicted RBP10.92□□□□□ -0.66
RCR1YBR005W GRX1P25373 110 aaKnown RBP10.91□□□□□ -0.66
RCR1YBR005W GRX4P32642 244 aa10.91□□□□□ -0.66
RCR1YBR005W RRT14P40470 206 aa10.91□□□□□ -0.66
RCR1YBR005W RRD1P40454 393 aaKnown RBP10.9□□□□□ -0.66
RCR1YBR005W ADE16P54113 591 aaKnown RBP10.9□□□□□ -0.66
RCR1YBR005W HPC2Q01448 625 aa10.89□□□□□ -0.67
RCR1YBR005W CTT1P06115 562 aa10.88□□□□□ -0.67
RCR1YBR005W FKH1P40466 484 aa10.87□□□□□ -0.67
RCR1YBR005W TAP42Q04372 366 aa10.87□□□□□ -0.67
RCR1YBR005W GRE2Q12068 342 aaKnown RBP10.87□□□□□ -0.67
RCR1YBR005W RPO41P13433 1351 aaKnown RBP10.87□□□□□ -0.67
RCR1YBR005W MSN5P52918 1224 aa10.86□□□□□ -0.67
RCR1YBR005W YML133CQ03099 1374 aa10.86□□□□□ -0.67
RCR1YBR005W YLL067CQ07888 1374 aa10.86□□□□□ -0.67
RCR1YBR005W YLL066CQ99208 1374 aa10.86□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms