RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C LDB19Q12502 818 aa6.98□□□□□ -1.29
RFA1YAR007C TY1B-JR2P47100 1755 aaKnown RBP6.98□□□□□ -1.29
RFA1YAR007C TY1B-ER2Q03619 1755 aa6.98□□□□□ -1.29
RFA1YAR007C TY1B-MR1Q04214 1755 aa6.98□□□□□ -1.29
RFA1YAR007C TY1B-MR2Q04670 1755 aaKnown RBP6.98□□□□□ -1.29
RFA1YAR007C TY1B-LR1Q12088 1755 aaKnown RBP6.98□□□□□ -1.29
RFA1YAR007C TY1B-NL1Q12112 1755 aa6.98□□□□□ -1.29
RFA1YAR007C TY1B-GR1Q12141 1755 aa6.98□□□□□ -1.29
RFA1YAR007C TY1B-BLQ12490 1755 aa6.98□□□□□ -1.29
RFA1YAR007C CAT8P39113 1433 aa6.97□□□□□ -1.29
RFA1YAR007C PDR5P33302 1511 aaKnown RBP6.97□□□□□ -1.29
RFA1YAR007C RQC2Q12532 1038 aaKnown RBP6.97□□□□□ -1.29
RFA1YAR007C GDB1Q06625 1536 aa6.96□□□□□ -1.29
RFA1YAR007C EAF7P53911 425 aaKnown RBP6.96□□□□□ -1.29
RFA1YAR007C SET4P42948 560 aa6.96□□□□□ -1.3
RFA1YAR007C NST1P53935 1240 aa6.96□□□□□ -1.3
RFA1YAR007C ARO1P08566 1588 aaKnown RBP6.95□□□□□ -1.3
RFA1YAR007C YOL036WQ08206 761 aa6.95□□□□□ -1.3
RFA1YAR007C MSB4Q12317 492 aa6.95□□□□□ -1.3
RFA1YAR007C GEA2P39993 1459 aaKnown RBP6.95□□□□□ -1.3
RFA1YAR007C VMA1P17255 1071 aaKnown RBP6.94□□□□□ -1.3
RFA1YAR007C PDS5Q04264 1277 aa6.94□□□□□ -1.3
RFA1YAR007C TCB2P48231 1178 aa6.93□□□□□ -1.3
RFA1YAR007C EAP1P36041 632 aaKnown RBP6.91□□□□□ -1.3
RFA1YAR007C YJL171CP46992 396 aa6.91□□□□□ -1.3
RFA1YAR007C TY3B-IQ7LHG5 1498 aaKnown RBP6.91□□□□□ -1.3
RFA1YAR007C TRP5P00931 707 aaKnown RBP6.9□□□□□ -1.3
RFA1YAR007C CKB1P43639 278 aa6.9□□□□□ -1.3
RFA1YAR007C SAM3Q08986 587 aa6.9□□□□□ -1.31
RFA1YAR007C IQG1Q12280 1495 aa6.89□□□□□ -1.31
RFA1YAR007C MNN4P36044 1178 aa6.89□□□□□ -1.31
RFA1YAR007C SNF7P39929 240 aaKnown RBP6.89□□□□□ -1.31
RFA1YAR007C CDC25P04821 1589 aa6.89□□□□□ -1.31
RFA1YAR007C RVB2Q12464 471 aaKnown RBP6.88□□□□□ -1.31
RFA1YAR007C FPR3P38911 411 aaKnown RBP6.87□□□□□ -1.31
RFA1YAR007C PDR12Q02785 1511 aa6.87□□□□□ -1.31
RFA1YAR007C CDC45Q08032 650 aa6.87□□□□□ -1.31
RFA1YAR007C BUD21Q08492 214 aaPredicted RBP6.87□□□□□ -1.31
RFA1YAR007C MMS1Q06211 1407 aa6.86□□□□□ -1.31
RFA1YAR007C BUD3P25558 1636 aa6.86□□□□□ -1.31
RFA1YAR007C RTG1P32607 177 aa6.85□□□□□ -1.31
RFA1YAR007C PAF1P38351 445 aa6.85□□□□□ -1.31
RFA1YAR007C VPS27P40343 622 aaKnown RBP6.85□□□□□ -1.31
RFA1YAR007C NTE1Q04958 1679 aa6.85□□□□□ -1.31
RFA1YAR007C RPO21P04050 1733 aaKnown RBP6.85□□□□□ -1.31
RFA1YAR007C LEO1P38439 464 aa6.84□□□□□ -1.31
RFA1YAR007C YIR014WP40570 242 aa6.84□□□□□ -1.31
RFA1YAR007C YOR093CQ12275 1648 aa6.83□□□□□ -1.32
RFA1YAR007C RPP0P05317 312 aaKnown RBP6.83□□□□□ -1.32
RFA1YAR007C ROX1P25042 368 aa6.83□□□□□ -1.32
RFA1YAR007C SIS2P36024 562 aa6.83□□□□□ -1.32
RFA1YAR007C BMT6Q12291 365 aa6.83□□□□□ -1.32
RFA1YAR007C ABP1P15891 592 aaKnown RBP6.82□□□□□ -1.32
RFA1YAR007C NCR1Q12200 1170 aa6.81□□□□□ -1.32
RFA1YAR007C SPO14P36126 1683 aa6.81□□□□□ -1.32
RFA1YAR007C LTE1P07866 1435 aa6.81□□□□□ -1.32
RFA1YAR007C YNL035CP53962 389 aaKnown RBP6.81□□□□□ -1.32
RFA1YAR007C TAF5P38129 798 aa6.8□□□□□ -1.32
RFA1YAR007C DJP1P40564 432 aa6.8□□□□□ -1.32
RFA1YAR007C GYP5Q12344 894 aa6.8□□□□□ -1.32
RFA1YAR007C DNF2Q12675 1612 aa6.8□□□□□ -1.32
RFA1YAR007C KIP3P53086 805 aaKnown RBP6.79□□□□□ -1.32
RFA1YAR007C SLN1P39928 1220 aaPredicted RBP6.79□□□□□ -1.32
RFA1YAR007C YDL144CQ07589 356 aa6.79□□□□□ -1.32
RFA1YAR007C DOP1Q03921 1698 aa6.78□□□□□ -1.32
RFA1YAR007C PCT1P13259 424 aa6.78□□□□□ -1.32
RFA1YAR007C NUP157P40064 1391 aaKnown RBP6.78□□□□□ -1.32
RFA1YAR007C RAM2P29703 316 aa6.77□□□□□ -1.33
RFA1YAR007C SEC61P32915 480 aa6.77□□□□□ -1.33
RFA1YAR007C YSP2Q06681 1438 aa6.77□□□□□ -1.33
RFA1YAR007C RPA190P10964 1664 aaKnown RBP6.77□□□□□ -1.33
RFA1YAR007C SUI2P20459 304 aaKnown RBP6.77□□□□□ -1.33
RFA1YAR007C DCW1P36091 449 aa6.76□□□□□ -1.33
RFA1YAR007C DAN4P47179 1161 aa6.76□□□□□ -1.33
RFA1YAR007C YRB30P53107 440 aaPredicted RBP6.76□□□□□ -1.33
RFA1YAR007C RAV1P47104 1357 aa6.75□□□□□ -1.33
RFA1YAR007C RTC1Q08281 1341 aa6.75□□□□□ -1.33
RFA1YAR007C CHC1P22137 1653 aaKnown RBP6.74□□□□□ -1.33
RFA1YAR007C MLP1Q02455 1875 aaKnown RBP6.74□□□□□ -1.33
RFA1YAR007C PDR11P40550 1411 aa6.73□□□□□ -1.33
RFA1YAR007C HTA1P04911 132 aaKnown RBP6.73□□□□□ -1.33
RFA1YAR007C HTA2P04912 132 aa6.73□□□□□ -1.33
RFA1YAR007C SNF2P22082 1703 aa6.72□□□□□ -1.33
RFA1YAR007C DRS2P39524 1355 aa6.72□□□□□ -1.33
RFA1YAR007C MAK11P20484 414 aaKnown RBP6.72□□□□□ -1.33
RFA1YAR007C JIP4Q03361 876 aa6.72□□□□□ -1.33
RFA1YAR007C TRK1P12685 1235 aa6.71□□□□□ -1.34
RFA1YAR007C MSP1P28737 362 aa6.71□□□□□ -1.34
RFA1YAR007C MIF2P35201 549 aa6.71□□□□□ -1.34
RFA1YAR007C VPS24P36095 224 aaKnown RBP6.71□□□□□ -1.34
RFA1YAR007C MPP10P47083 593 aaKnown RBP6.71□□□□□ -1.34
RFA1YAR007C AIM44Q99299 758 aa6.71□□□□□ -1.34
RFA1YAR007C EDE1P34216 1381 aa6.71□□□□□ -1.34
RFA1YAR007C ESL2P36168 1195 aa6.7□□□□□ -1.34
RFA1YAR007C YEL023CP39992 682 aa6.7□□□□□ -1.34
RFA1YAR007C CTR9P89105 1077 aa6.7□□□□□ -1.34
RFA1YAR007C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
RFA1YAR007C NUP192P47054 1683 aa6.7□□□□□ -1.34
RFA1YAR007C EDS1P38073 919 aa6.7□□□□□ -1.34
RFA1YAR007C PTC4P38089 393 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms