RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W MMS1Q06211 1407 aa9.62□□□□□ -0.87
SWD1YAR003W SIS1P25294 352 aaKnown RBP9.61□□□□□ -0.87
SWD1YAR003W STS1P38637 319 aa9.61□□□□□ -0.87
SWD1YAR003W YFR006WP43590 535 aa9.61□□□□□ -0.87
SWD1YAR003W BNI1P41832 1953 aa9.61□□□□□ -0.87
SWD1YAR003W DOP1Q03921 1698 aa9.59□□□□□ -0.87
SWD1YAR003W SPP1Q03012 353 aa9.57□□□□□ -0.88
SWD1YAR003W BUD21Q08492 214 aaPredicted RBP9.57□□□□□ -0.88
SWD1YAR003W BNR1P40450 1375 aa9.57□□□□□ -0.88
SWD1YAR003W SSM4P40318 1319 aa9.56□□□□□ -0.88
SWD1YAR003W YSP2Q06681 1438 aa9.56□□□□□ -0.88
SWD1YAR003W VMA1P17255 1071 aaKnown RBP9.53□□□□□ -0.88
SWD1YAR003W TIF11P38912 153 aaKnown RBP9.52□□□□□ -0.89
SWD1YAR003W RAM2P29703 316 aa9.51□□□□□ -0.89
SWD1YAR003W MSB4Q12317 492 aa9.51□□□□□ -0.89
SWD1YAR003W CHC1P22137 1653 aaKnown RBP9.5□□□□□ -0.89
SWD1YAR003W SEC7P11075 2009 aaKnown RBP9.49□□□□□ -0.89
SWD1YAR003W ABP1P15891 592 aaKnown RBP9.47□□□□□ -0.89
SWD1YAR003W MAK11P20484 414 aaKnown RBP9.47□□□□□ -0.89
SWD1YAR003W YOL036WQ08206 761 aa9.47□□□□□ -0.89
SWD1YAR003W SAM3Q08986 587 aa9.47□□□□□ -0.89
SWD1YAR003W DNF2Q12675 1612 aa9.45□□□□□ -0.9
SWD1YAR003W EAP1P36041 632 aaKnown RBP9.44□□□□□ -0.9
SWD1YAR003W SET4P42948 560 aa9.44□□□□□ -0.9
SWD1YAR003W URN1Q06525 465 aaKnown RBP9.44□□□□□ -0.9
SWD1YAR003W ULI1P43604 169 aa9.43□□□□□ -0.9
SWD1YAR003W GCN2P15442 1659 aa9.39□□□□□ -0.91
SWD1YAR003W IOC2Q12072 812 aa9.38□□□□□ -0.91
SWD1YAR003W MIF2P35201 549 aa9.37□□□□□ -0.91
SWD1YAR003W PAF1P38351 445 aa9.37□□□□□ -0.91
SWD1YAR003W GYP5Q12344 894 aa9.36□□□□□ -0.91
SWD1YAR003W LDB19Q12502 818 aa9.36□□□□□ -0.91
SWD1YAR003W YAP3P38749 330 aa9.35□□□□□ -0.91
SWD1YAR003W TRP5P00931 707 aaKnown RBP9.34□□□□□ -0.91
SWD1YAR003W NOP7P53261 605 aaKnown RBP9.34□□□□□ -0.91
SWD1YAR003W COQ8P27697 501 aa9.33□□□□□ -0.92
SWD1YAR003W YOR093CQ12275 1648 aa9.33□□□□□ -0.92
SWD1YAR003W FKH1P40466 484 aa9.31□□□□□ -0.92
SWD1YAR003W NUP188P52593 1655 aaKnown RBP9.31□□□□□ -0.92
SWD1YAR003W EDS1P38073 919 aa9.3□□□□□ -0.92
SWD1YAR003W PTC3P34221 468 aaKnown RBP9.29□□□□□ -0.92
SWD1YAR003W PDR5P33302 1511 aaKnown RBP9.29□□□□□ -0.92
SWD1YAR003W IML1P47170 1584 aa9.29□□□□□ -0.92
SWD1YAR003W IPL1P38991 367 aa9.28□□□□□ -0.92
SWD1YAR003W GRE2Q12068 342 aaKnown RBP9.28□□□□□ -0.92
SWD1YAR003W HTA1P04911 132 aaKnown RBP9.27□□□□□ -0.93
SWD1YAR003W HTA2P04912 132 aa9.27□□□□□ -0.93
SWD1YAR003W AIR2Q12476 344 aaKnown RBP9.27□□□□□ -0.93
SWD1YAR003W VMR1P38735 1592 aa9.26□□□□□ -0.93
SWD1YAR003W DCW1P36091 449 aa9.26□□□□□ -0.93
SWD1YAR003W NOP53Q12080 455 aaKnown RBP9.26□□□□□ -0.93
SWD1YAR003W ATH1P48016 1211 aa9.25□□□□□ -0.93
SWD1YAR003W YNL035CP53962 389 aaKnown RBP9.25□□□□□ -0.93
SWD1YAR003W DNF3Q12674 1656 aa9.24□□□□□ -0.93
SWD1YAR003W RTG1P32607 177 aa9.24□□□□□ -0.93
SWD1YAR003W GUT1P32190 709 aa9.23□□□□□ -0.93
SWD1YAR003W TYS1P36421 394 aaKnown RBP9.22□□□□□ -0.93
SWD1YAR003W JIP4Q03361 876 aa9.22□□□□□ -0.93
SWD1YAR003W SEC61P32915 480 aa9.21□□□□□ -0.94
SWD1YAR003W YJL171CP46992 396 aa9.21□□□□□ -0.94
SWD1YAR003W RAV1P47104 1357 aa9.21□□□□□ -0.94
SWD1YAR003W MAK10Q02197 733 aa9.19□□□□□ -0.94
SWD1YAR003W HAP1P0CE41 1502 aa9.18□□□□□ -0.94
SWD1YAR003W YEL023CP39992 682 aa9.18□□□□□ -0.94
SWD1YAR003W NCR1Q12200 1170 aa9.18□□□□□ -0.94
SWD1YAR003W RTC1Q08281 1341 aa9.17□□□□□ -0.94
SWD1YAR003W PTC4P38089 393 aa9.17□□□□□ -0.94
SWD1YAR003W PDR11P40550 1411 aa9.16□□□□□ -0.94
SWD1YAR003W SET1P38827 1080 aaKnown RBP9.16□□□□□ -0.94
SWD1YAR003W DAN4P47179 1161 aa9.16□□□□□ -0.94
SWD1YAR003W TFG1P41895 735 aaPredicted RBP9.13□□□□□ -0.95
SWD1YAR003W BMT6Q12291 365 aa9.13□□□□□ -0.95
SWD1YAR003W ESL2P36168 1195 aa9.11□□□□□ -0.95
SWD1YAR003W NAP1P25293 417 aaKnown RBP9.1□□□□□ -0.95
SWD1YAR003W MRX12P47084 519 aa9.1□□□□□ -0.95
SWD1YAR003W TAF5P38129 798 aa9.09□□□□□ -0.95
SWD1YAR003W SCT1P32784 759 aa9.07□□□□□ -0.96
SWD1YAR003W POL5P39985 1022 aaKnown RBP9.07□□□□□ -0.96
SWD1YAR003W SOL3P38858 249 aa9.06□□□□□ -0.96
SWD1YAR003W ALD4P46367 519 aaKnown RBP9.05□□□□□ -0.96
SWD1YAR003W NST1P53935 1240 aa9.05□□□□□ -0.96
SWD1YAR003W YDL129WQ07555 291 aa9.05□□□□□ -0.96
SWD1YAR003W BCK1Q01389 1478 aa9.04□□□□□ -0.96
SWD1YAR003W RIA1P53893 1110 aa9.03□□□□□ -0.96
SWD1YAR003W YMR196WQ04336 1088 aa9.03□□□□□ -0.96
SWD1YAR003W KRE5P22023 1365 aa9.02□□□□□ -0.97
SWD1YAR003W YGR273CP53329 174 aa9.02□□□□□ -0.97
SWD1YAR003W CAB1Q04430 367 aa9.02□□□□□ -0.97
SWD1YAR003W TY1B-NL2Q99337 1749 aaKnown RBP9.02□□□□□ -0.97
SWD1YAR003W RAD9P14737 1309 aa9.02□□□□□ -0.97
SWD1YAR003W AI4P03878 556 aa9.01□□□□□ -0.97
SWD1YAR003W MPH3P0CE00 602 aa9.01□□□□□ -0.97
SWD1YAR003W NUP192P47054 1683 aa9□□□□□ -0.97
SWD1YAR003W ORC1P54784 914 aaPredicted RBP9□□□□□ -0.97
SWD1YAR003W SAP30P38429 201 aa8.99□□□□□ -0.97
SWD1YAR003W KIP3P53086 805 aaKnown RBP8.99□□□□□ -0.97
SWD1YAR003W TAF8Q03750 510 aa8.99□□□□□ -0.97
SWD1YAR003W DMA1P38823 416 aa8.98□□□□□ -0.97
SWD1YAR003W PML39Q03760 334 aa8.98□□□□□ -0.97
SWD1YAR003W CFT1Q06632 1357 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 145.6 ms