RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C TYS1P36421 394 aaKnown RBP5.22□□□□□ -1.57
PTA1YAL043C YFR016CP43597 1233 aaKnown RBP5.22□□□□□ -1.57
PTA1YAL043C GCN2P15442 1659 aa5.21□□□□□ -1.57
PTA1YAL043C SIS2P36024 562 aa5.21□□□□□ -1.57
PTA1YAL043C MGA2P40578 1113 aa5.21□□□□□ -1.57
PTA1YAL043C YOR238WQ08634 303 aa5.21□□□□□ -1.57
PTA1YAL043C PDR5P33302 1511 aaKnown RBP5.21□□□□□ -1.58
PTA1YAL043C DRS2P39524 1355 aa5.21□□□□□ -1.58
PTA1YAL043C YRF1-1P0CX20 1796 aa5.2□□□□□ -1.58
PTA1YAL043C YRF1-5P0CX21 1796 aa5.2□□□□□ -1.58
PTA1YAL043C YRF1-8P0CX22 1796 aa5.2□□□□□ -1.58
PTA1YAL043C SPE2P21182 396 aa5.2□□□□□ -1.58
PTA1YAL043C MRM1P25270 412 aa5.2□□□□□ -1.58
PTA1YAL043C TAF8Q03750 510 aa5.2□□□□□ -1.58
PTA1YAL043C TRK1P12685 1235 aa5.19□□□□□ -1.58
PTA1YAL043C CHZ1P40019 153 aaPredicted RBP5.19□□□□□ -1.58
PTA1YAL043C YAP5P40574 245 aa5.19□□□□□ -1.58
PTA1YAL043C MMS1Q06211 1407 aa5.19□□□□□ -1.58
PTA1YAL043C RPC31P17890 251 aa5.19□□□□□ -1.58
PTA1YAL043C CST9Q06032 482 aa5.19□□□□□ -1.58
PTA1YAL043C ESL2P36168 1195 aa5.18□□□□□ -1.58
PTA1YAL043C RVB2Q12464 471 aaKnown RBP5.18□□□□□ -1.58
PTA1YAL043C YLR419WQ06698 1435 aaKnown RBP5.18□□□□□ -1.58
PTA1YAL043C MST1P07236 462 aa5.18□□□□□ -1.58
PTA1YAL043C YAP3P38749 330 aa5.18□□□□□ -1.58
PTA1YAL043C CAB1Q04430 367 aa5.18□□□□□ -1.58
PTA1YAL043C YDL144CQ07589 356 aa5.18□□□□□ -1.58
PTA1YAL043C PDR12Q02785 1511 aa5.18□□□□□ -1.58
PTA1YAL043C RTC1Q08281 1341 aa5.17□□□□□ -1.58
PTA1YAL043C EBP2P36049 427 aaKnown RBP5.16□□□□□ -1.58
PTA1YAL043C MPP10P47083 593 aaKnown RBP5.16□□□□□ -1.58
PTA1YAL043C RAD9P14737 1309 aa5.16□□□□□ -1.58
PTA1YAL043C RAV1P47104 1357 aa5.15□□□□□ -1.58
PTA1YAL043C YPR148CQ06523 435 aa5.15□□□□□ -1.59
PTA1YAL043C YOR093CQ12275 1648 aa5.14□□□□□ -1.59
PTA1YAL043C FPR3P38911 411 aaKnown RBP5.13□□□□□ -1.59
PTA1YAL043C YEF3P16521 1044 aaKnown RBP5.13□□□□□ -1.59
PTA1YAL043C SUI2P20459 304 aaKnown RBP5.13□□□□□ -1.59
PTA1YAL043C VMR1P38735 1592 aa5.12□□□□□ -1.59
PTA1YAL043C DAL5P15365 543 aa5.12□□□□□ -1.59
PTA1YAL043C PAP2P53632 584 aaKnown RBP5.12□□□□□ -1.59
PTA1YAL043C CSE4P36012 229 aa5.12□□□□□ -1.59
PTA1YAL043C ITT1Q04638 464 aa5.11□□□□□ -1.59
PTA1YAL043C MET5P47169 1442 aa5.11□□□□□ -1.59
PTA1YAL043C VPS27P40343 622 aaKnown RBP5.11□□□□□ -1.59
PTA1YAL043C RCM1P53972 490 aa5.11□□□□□ -1.59
PTA1YAL043C IML1P47170 1584 aa5.1□□□□□ -1.59
PTA1YAL043C IPL1P38991 367 aa5.1□□□□□ -1.59
PTA1YAL043C GTT3P39996 337 aa5.1□□□□□ -1.59
PTA1YAL043C CDC45Q08032 650 aa5.1□□□□□ -1.59
PTA1YAL043C TY3B-IQ7LHG5 1498 aaKnown RBP5.1□□□□□ -1.59
PTA1YAL043C RTR1P40084 226 aaPredicted RBP5.09□□□□□ -1.59
PTA1YAL043C YRB30P53107 440 aaPredicted RBP5.09□□□□□ -1.59
PTA1YAL043C TPD3P31383 635 aa5.09□□□□□ -1.59
PTA1YAL043C PIB1Q06651 286 aa5.09□□□□□ -1.59
PTA1YAL043C YBL029C-AQ3E756 94 aa5.09□□□□□ -1.59
PTA1YAL043C ALD4P46367 519 aaKnown RBP5.08□□□□□ -1.6
PTA1YAL043C CHC1P22137 1653 aaKnown RBP5.08□□□□□ -1.6
PTA1YAL043C KRE5P22023 1365 aa5.08□□□□□ -1.6
PTA1YAL043C SIS1P25294 352 aaKnown RBP5.08□□□□□ -1.6
PTA1YAL043C CAB3P36076 571 aa5.08□□□□□ -1.6
PTA1YAL043C DJP1P40564 432 aa5.08□□□□□ -1.6
PTA1YAL043C RRP46P53256 223 aaPredicted RBP5.08□□□□□ -1.6
PTA1YAL043C HIM1Q06674 414 aa5.08□□□□□ -1.6
PTA1YAL043C SEC7P11075 2009 aaKnown RBP5.08□□□□□ -1.6
PTA1YAL043C DOP1Q03921 1698 aa5.08□□□□□ -1.6
PTA1YAL043C KAR2P16474 682 aaKnown RBP5.07□□□□□ -1.6
PTA1YAL043C IME2P32581 645 aa5.07□□□□□ -1.6
PTA1YAL043C FKH1P40466 484 aa5.07□□□□□ -1.6
PTA1YAL043C NUP192P47054 1683 aa5.07□□□□□ -1.6
PTA1YAL043C SAP155P43612 1002 aa5.07□□□□□ -1.6
PTA1YAL043C YMR1P47147 688 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
PTA1YAL043C RIA1P53893 1110 aa5.07□□□□□ -1.6
PTA1YAL043C WSC3Q12215 556 aa5.07□□□□□ -1.6
PTA1YAL043C PPH3P32345 308 aa5.06□□□□□ -1.6
PTA1YAL043C YBR287WP38355 427 aa5.06□□□□□ -1.6
PTA1YAL043C VPS29P38759 282 aa5.06□□□□□ -1.6
PTA1YAL043C GAS4Q08271 471 aa5.06□□□□□ -1.6
PTA1YAL043C OPY1P38271 328 aa5.06□□□□□ -1.6
PTA1YAL043C MRX12P47084 519 aa5.06□□□□□ -1.6
PTA1YAL043C MLP1Q02455 1875 aaKnown RBP5.05□□□□□ -1.6
PTA1YAL043C DBP1P24784 617 aaKnown RBP5.05□□□□□ -1.6
PTA1YAL043C VNX1P42839 908 aa5.05□□□□□ -1.6
PTA1YAL043C IOC4Q04213 475 aa5.05□□□□□ -1.6
PTA1YAL043C DNF2Q12675 1612 aa5.05□□□□□ -1.6
PTA1YAL043C RCR1P38212 213 aa5.04□□□□□ -1.6
PTA1YAL043C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
PTA1YAL043C EAF7P53911 425 aaKnown RBP5.04□□□□□ -1.6
PTA1YAL043C PUF6Q04373 656 aaKnown RBP5.04□□□□□ -1.6
PTA1YAL043C YFR006WP43590 535 aa5.04□□□□□ -1.6
PTA1YAL043C THI22Q06490 572 aa5.04□□□□□ -1.6
PTA1YAL043C RAD2P07276 1031 aa5.03□□□□□ -1.6
PTA1YAL043C SPP1Q03012 353 aa5.02□□□□□ -1.61
PTA1YAL043C RTT109Q07794 436 aa5.02□□□□□ -1.61
PTA1YAL043C YML133CQ03099 1374 aa5.02□□□□□ -1.61
PTA1YAL043C YLL067CQ07888 1374 aa5.02□□□□□ -1.61
PTA1YAL043C YLL066CQ99208 1374 aa5.02□□□□□ -1.61
PTA1YAL043C NUP188P52593 1655 aaKnown RBP5.02□□□□□ -1.61
PTA1YAL043C CLC1P17891 233 aa5.02□□□□□ -1.61
PTA1YAL043C NAP1P25293 417 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms