RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C SPT16P32558 1035 aaKnown RBP3.95□□□□□ -1.78
CLN3YAL040C SSN2P38931 1420 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-DR4O74302 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-HP0C2I4 478 aaKnown RBP3.93□□□□□ -1.78
CLN3YAL040C TY1A-AP0CX57 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-PR1P0CX58 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-ORP0CX59 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-PR2P0CX60 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-DR5P0CX65 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-ER2P0CX66 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-GR3P0CX67 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-LR1P0CX68 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-MR2P0CX69 440 aa3.93□□□□□ -1.78
CLN3YAL040C PAT1P25644 796 aaKnown RBP3.93□□□□□ -1.78
CLN3YAL040C PSE1P32337 1089 aaKnown RBP3.93□□□□□ -1.78
CLN3YAL040C TY1A-JR2P47099 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-DR1Q03856 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-ML1Q04706 440 aaKnown RBP3.93□□□□□ -1.78
CLN3YAL040C TY1A-BRQ12217 440 aa3.93□□□□□ -1.78
CLN3YAL040C MAM3Q12296 706 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-NL2Q12470 440 aa3.93□□□□□ -1.78
CLN3YAL040C TY1A-GR2Q12485 440 aa3.93□□□□□ -1.78
CLN3YAL040C SPA2P23201 1466 aaKnown RBP3.93□□□□□ -1.78
CLN3YAL040C CLB5P30283 435 aa3.92□□□□□ -1.78
CLN3YAL040C TAF7Q05021 590 aa3.92□□□□□ -1.78
CLN3YAL040C DMA1P38823 416 aa3.92□□□□□ -1.78
CLN3YAL040C SAS10Q12136 610 aaPredicted RBP3.92□□□□□ -1.78
CLN3YAL040C SPT6P23615 1451 aaKnown RBP3.92□□□□□ -1.78
CLN3YAL040C SEC2P17065 759 aa3.91□□□□□ -1.78
CLN3YAL040C CST6P40535 587 aa3.9□□□□□ -1.78
CLN3YAL040C RRN7P40992 514 aa3.9□□□□□ -1.78
CLN3YAL040C DSF2P38213 736 aa3.9□□□□□ -1.79
CLN3YAL040C LAM6Q08001 693 aa3.9□□□□□ -1.79
CLN3YAL040C KEX2P13134 814 aa3.89□□□□□ -1.79
CLN3YAL040C IES2P40154 320 aa3.89□□□□□ -1.79
CLN3YAL040C FRK1Q03002 865 aaPredicted RBP3.88□□□□□ -1.79
CLN3YAL040C HIR3P47171 1648 aa3.87□□□□□ -1.79
CLN3YAL040C BRE2P43132 505 aa3.87□□□□□ -1.79
CLN3YAL040C RTF1P53064 558 aa3.87□□□□□ -1.79
CLN3YAL040C GCR2Q01722 534 aa3.87□□□□□ -1.79
CLN3YAL040C CDC4P07834 779 aa3.87□□□□□ -1.79
CLN3YAL040C SPB4P25808 606 aaPredicted RBP3.87□□□□□ -1.79
CLN3YAL040C BDP1P46678 594 aa3.87□□□□□ -1.79
CLN3YAL040C ERF2Q06551 359 aa3.86□□□□□ -1.79
CLN3YAL040C AIR1P40507 360 aaKnown RBP3.85□□□□□ -1.79
CLN3YAL040C TEA1P47988 759 aa3.85□□□□□ -1.79
CLN3YAL040C CLA4P48562 842 aa3.85□□□□□ -1.79
CLN3YAL040C DNA2P38859 1522 aa3.84□□□□□ -1.79
CLN3YAL040C NUP42P49686 430 aaKnown RBP3.84□□□□□ -1.79
CLN3YAL040C YNL115CP53925 644 aa3.84□□□□□ -1.79
CLN3YAL040C HED1Q03937 162 aa3.84□□□□□ -1.79
CLN3YAL040C PAC1P39946 494 aaKnown RBP3.84□□□□□ -1.8
CLN3YAL040C TUB4P53378 473 aa3.83□□□□□ -1.8
CLN3YAL040C XRN1P22147 1528 aaKnown RBP3.83□□□□□ -1.8
CLN3YAL040C SIT4P20604 311 aa3.82□□□□□ -1.8
CLN3YAL040C AGE1Q04412 482 aa3.82□□□□□ -1.8
CLN3YAL040C MOD5P07884 428 aa3.81□□□□□ -1.8
CLN3YAL040C DIT2P21595 489 aa3.81□□□□□ -1.8
CLN3YAL040C KXD1P53158 218 aa3.81□□□□□ -1.8
CLN3YAL040C YMR196WQ04336 1088 aa3.81□□□□□ -1.8
CLN3YAL040C KOG1P38873 1557 aa3.81□□□□□ -1.8
CLN3YAL040C GBP2P25555 427 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
CLN3YAL040C NIS1P53939 407 aa3.8□□□□□ -1.8
CLN3YAL040C HST3P53687 447 aa3.78□□□□□ -1.8
CLN3YAL040C REV3P14284 1504 aa3.78□□□□□ -1.8
CLN3YAL040C GAR1P28007 205 aaKnown RBP3.78□□□□□ -1.8
CLN3YAL040C TPD3P31383 635 aa3.78□□□□□ -1.8
CLN3YAL040C FPK1P53739 893 aa3.78□□□□□ -1.8
CLN3YAL040C PUS5Q06244 254 aa3.78□□□□□ -1.8
CLN3YAL040C AFT1P22149 690 aa3.77□□□□□ -1.81
CLN3YAL040C SLY41P22215 453 aa3.77□□□□□ -1.81
CLN3YAL040C ASH1P34233 588 aa3.77□□□□□ -1.81
CLN3YAL040C MET32Q12041 191 aa3.77□□□□□ -1.81
CLN3YAL040C RRD1P40454 393 aaKnown RBP3.76□□□□□ -1.81
CLN3YAL040C HXT10P43581 546 aa3.76□□□□□ -1.81
CLN3YAL040C TBF1Q02457 562 aa3.76□□□□□ -1.81
CLN3YAL040C ATF2P53296 535 aa3.75□□□□□ -1.81
CLN3YAL040C ENV9Q08651 330 aa3.75□□□□□ -1.81
CLN3YAL040C PDC1P06169 563 aaKnown RBP3.75□□□□□ -1.81
CLN3YAL040C MET22P32179 357 aa3.75□□□□□ -1.81
CLN3YAL040C PUS6P53294 404 aa3.75□□□□□ -1.81
CLN3YAL040C HST2P53686 357 aa3.75□□□□□ -1.81
CLN3YAL040C SYH1Q02875 849 aaKnown RBP3.75□□□□□ -1.81
CLN3YAL040C ALR1Q08269 859 aa3.75□□□□□ -1.81
CLN3YAL040C THO2P53552 1597 aaKnown RBP3.75□□□□□ -1.81
CLN3YAL040C SIN3P22579 1536 aa3.74□□□□□ -1.81
CLN3YAL040C RPA14P50106 137 aa3.74□□□□□ -1.81
CLN3YAL040C YNR021WP53723 404 aaKnown RBP3.74□□□□□ -1.81
CLN3YAL040C SSK2P53599 1579 aa3.74□□□□□ -1.81
CLN3YAL040C ATG2P53855 1592 aa3.73□□□□□ -1.81
CLN3YAL040C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
CLN3YAL040C YDR444WQ04093 687 aa3.73□□□□□ -1.81
CLN3YAL040C YPR097WQ06839 1073 aa3.73□□□□□ -1.81
CLN3YAL040C MMP1Q12372 583 aa3.73□□□□□ -1.81
CLN3YAL040C YDL206WQ12424 762 aa3.73□□□□□ -1.81
CLN3YAL040C TAF2P23255 1407 aa3.72□□□□□ -1.81
CLN3YAL040C ESP1Q03018 1630 aa3.72□□□□□ -1.81
CLN3YAL040C TRM1P15565 570 aaKnown RBP3.72□□□□□ -1.81
CLN3YAL040C KIP2P28743 706 aa3.72□□□□□ -1.81
CLN3YAL040C GLN1P32288 370 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms