RNA–Protein interactions for RNA: RDN5-4

RDN5-4, Transcript of Variant 5S ribosomal rRNA (5S rRNA) gene, yeastyeast

Gene RDN5-4, Length 119 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN5-4RDN5-4 ITT1Q04638 464 aa8.55□□□□□ -1.04
RDN5-4RDN5-4 YDL144CQ07589 356 aa8.55□□□□□ -1.04
RDN5-4RDN5-4 RVB2Q12464 471 aaKnown RBP8.55□□□□□ -1.04
RDN5-4RDN5-4 FPR3P38911 411 aaKnown RBP8.54□□□□□ -1.04
RDN5-4RDN5-4 YEF3P16521 1044 aaKnown RBP8.53□□□□□ -1.04
RDN5-4RDN5-4 CAB1Q04430 367 aa8.52□□□□□ -1.05
RDN5-4RDN5-4 YML133CQ03099 1374 aa8.51□□□□□ -1.05
RDN5-4RDN5-4 YLL067CQ07888 1374 aa8.51□□□□□ -1.05
RDN5-4RDN5-4 YLL066CQ99208 1374 aa8.51□□□□□ -1.05
RDN5-4RDN5-4 TRK1P12685 1235 aa8.51□□□□□ -1.05
RDN5-4RDN5-4 PSK1P31374 1356 aa8.5□□□□□ -1.05
RDN5-4RDN5-4 DNF3Q12674 1656 aa8.49□□□□□ -1.05
RDN5-4RDN5-4 SUI2P20459 304 aaKnown RBP8.48□□□□□ -1.05
RDN5-4RDN5-4 NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
RDN5-4RDN5-4 RPC31P17890 251 aa8.47□□□□□ -1.05
RDN5-4RDN5-4 TAP42Q04372 366 aa8.47□□□□□ -1.05
RDN5-4RDN5-4 FUN12P39730 1002 aaKnown RBP8.46□□□□□ -1.06
RDN5-4RDN5-4 MPP10P47083 593 aaKnown RBP8.46□□□□□ -1.06
RDN5-4RDN5-4 MRX12P47084 519 aa8.46□□□□□ -1.06
RDN5-4RDN5-4 KRE5P22023 1365 aa8.44□□□□□ -1.06
RDN5-4RDN5-4 ABP1P15891 592 aaKnown RBP8.43□□□□□ -1.06
RDN5-4RDN5-4 KAR2P16474 682 aaKnown RBP8.43□□□□□ -1.06
RDN5-4RDN5-4 PDI1P17967 522 aaKnown RBP8.43□□□□□ -1.06
RDN5-4RDN5-4 RTR1P40084 226 aaPredicted RBP8.43□□□□□ -1.06
RDN5-4RDN5-4 BUD27P43573 796 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
RDN5-4RDN5-4 RRP46P53256 223 aaPredicted RBP8.42□□□□□ -1.06
RDN5-4RDN5-4 RAD2P07276 1031 aa8.41□□□□□ -1.06
RDN5-4RDN5-4 GRX4P32642 244 aa8.41□□□□□ -1.06
RDN5-4RDN5-4 USO1P25386 1790 aa8.4□□□□□ -1.06
RDN5-4RDN5-4 YRF1-4O13559 1382 aa8.4□□□□□ -1.06
RDN5-4RDN5-4 SIR4P11978 1358 aa8.4□□□□□ -1.06
RDN5-4RDN5-4 YIR014WP40570 242 aa8.4□□□□□ -1.06
RDN5-4RDN5-4 SAP155P43612 1002 aa8.4□□□□□ -1.06
RDN5-4RDN5-4 RTF1P53064 558 aa8.4□□□□□ -1.06
RDN5-4RDN5-4 RCM1P53972 490 aa8.4□□□□□ -1.06
RDN5-4RDN5-4 LEU2P04173 364 aaPredicted RBP8.39□□□□□ -1.07
RDN5-4RDN5-4 PRD1P25375 712 aa8.39□□□□□ -1.07
RDN5-4RDN5-4 IME2P32581 645 aa8.39□□□□□ -1.07
RDN5-4RDN5-4 MTR4P47047 1073 aaKnown RBP8.39□□□□□ -1.07
RDN5-4RDN5-4 OPY1P38271 328 aa8.38□□□□□ -1.07
RDN5-4RDN5-4 RIA1P53893 1110 aa8.38□□□□□ -1.07
RDN5-4RDN5-4 PPH3P32345 308 aa8.37□□□□□ -1.07
RDN5-4RDN5-4 AUS1Q08409 1394 aa8.36□□□□□ -1.07
RDN5-4RDN5-4 CPS1P27614 576 aa8.36□□□□□ -1.07
RDN5-4RDN5-4 THI22Q06490 572 aa8.36□□□□□ -1.07
RDN5-4RDN5-4 TPD3P31383 635 aa8.35□□□□□ -1.07
RDN5-4RDN5-4 YIL092WP40497 633 aa8.35□□□□□ -1.07
RDN5-4RDN5-4 PAP2P53632 584 aaKnown RBP8.35□□□□□ -1.07
RDN5-4RDN5-4 HEF3P53978 1044 aaKnown RBP8.35□□□□□ -1.07
RDN5-4RDN5-4 MAK21Q12176 1025 aaKnown RBP8.35□□□□□ -1.07
RDN5-4RDN5-4 RPO41P13433 1351 aaKnown RBP8.35□□□□□ -1.07
RDN5-4RDN5-4 APC1P53886 1748 aa8.34□□□□□ -1.07
RDN5-4RDN5-4 EAF7P53911 425 aaKnown RBP8.34□□□□□ -1.07
RDN5-4RDN5-4 TY1B-NL2Q99337 1749 aaKnown RBP8.34□□□□□ -1.07
RDN5-4RDN5-4 PRP43P53131 767 aaKnown RBP8.32□□□□□ -1.08
RDN5-4RDN5-4 MAK10Q02197 733 aa8.32□□□□□ -1.08
RDN5-4RDN5-4 HIM1Q06674 414 aa8.32□□□□□ -1.08
RDN5-4RDN5-4 YFR016CP43597 1233 aaKnown RBP8.31□□□□□ -1.08
RDN5-4RDN5-4 YNR029CP53729 429 aaKnown RBP8.31□□□□□ -1.08
RDN5-4RDN5-4 DAL5P15365 543 aa8.3□□□□□ -1.08
RDN5-4RDN5-4 CLC1P17891 233 aa8.3□□□□□ -1.08
RDN5-4RDN5-4 POL32P47110 350 aa8.3□□□□□ -1.08
RDN5-4RDN5-4 ADE6P38972 1358 aaKnown RBP8.3□□□□□ -1.08
RDN5-4RDN5-4 RTT109Q07794 436 aa8.29□□□□□ -1.08
RDN5-4RDN5-4 CSE4P36012 229 aa8.26□□□□□ -1.09
RDN5-4RDN5-4 ECM16Q04217 1267 aaKnown RBP8.26□□□□□ -1.09
RDN5-4RDN5-4 SNF7P39929 240 aaKnown RBP8.25□□□□□ -1.09
RDN5-4RDN5-4 RPS24AP0CX31 135 aaKnown RBP8.23□□□□□ -1.09
RDN5-4RDN5-4 RPS24BP0CX32 135 aaKnown RBP8.23□□□□□ -1.09
RDN5-4RDN5-4 AKL1P38080 1108 aaKnown RBP8.23□□□□□ -1.09
RDN5-4RDN5-4 MAM1P40065 302 aa8.23□□□□□ -1.09
RDN5-4RDN5-4 YNL050CP53952 270 aa8.23□□□□□ -1.09
RDN5-4RDN5-4 YRF1-2P40105 1681 aa8.23□□□□□ -1.09
RDN5-4RDN5-4 DPS1P04802 557 aaKnown RBP8.22□□□□□ -1.09
RDN5-4RDN5-4 GYP7P48365 746 aa8.22□□□□□ -1.09
RDN5-4RDN5-4 PUF6Q04373 656 aaKnown RBP8.22□□□□□ -1.09
RDN5-4RDN5-4 GAS4Q08271 471 aa8.22□□□□□ -1.09
RDN5-4RDN5-4 EDE1P34216 1381 aa8.22□□□□□ -1.09
RDN5-4RDN5-4 PCT1P13259 424 aa8.21□□□□□ -1.1
RDN5-4RDN5-4 TY4B-HP0C2J7 1802 aa8.21□□□□□ -1.1
RDN5-4RDN5-4 TY4B-JP47024 1803 aa8.21□□□□□ -1.1
RDN5-4RDN5-4 DSD1P53095 428 aa8.2□□□□□ -1.1
RDN5-4RDN5-4 ROX1P25042 368 aa8.19□□□□□ -1.1
RDN5-4RDN5-4 BUB1P41695 1021 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
RDN5-4RDN5-4 ZDS1P50111 915 aaKnown RBP8.19□□□□□ -1.1
RDN5-4RDN5-4 RRP5Q05022 1729 aaKnown RBP8.18□□□□□ -1.1
RDN5-4RDN5-4 TRP5P00931 707 aaKnown RBP8.18□□□□□ -1.1
RDN5-4RDN5-4 NTH2P35172 780 aa8.18□□□□□ -1.1
RDN5-4RDN5-4 VPS24P36095 224 aaKnown RBP8.18□□□□□ -1.1
RDN5-4RDN5-4 YPR148CQ06523 435 aa8.18□□□□□ -1.1
RDN5-4RDN5-4 LSP1Q12230 341 aaKnown RBP8.18□□□□□ -1.1
RDN5-4RDN5-4 RRT14P40470 206 aa8.17□□□□□ -1.1
RDN5-4RDN5-4 CTF4Q01454 927 aa8.17□□□□□ -1.1
RDN5-4RDN5-4 YMR196WQ04336 1088 aa8.17□□□□□ -1.1
RDN5-4RDN5-4 YIL177CP40434 1758 aa8.16□□□□□ -1.1
RDN5-4RDN5-4 YJL225CP40889 1758 aa8.16□□□□□ -1.1
RDN5-4RDN5-4 YPP1P46951 817 aa8.16□□□□□ -1.1
RDN5-4RDN5-4 SRT1Q03175 343 aa8.16□□□□□ -1.1
RDN5-4RDN5-4 FKS3Q04952 1785 aa8.15□□□□□ -1.1
RDN5-4RDN5-4 RAD50P12753 1312 aa8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms