RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 CCDC7Q96M83 1385 aa21.15■□□□□ 0.98
LINC02228-204ENST00000642115 KDM5BQ9UGL1 1544 aa21.12■□□□□ 0.97
LINC02228-204ENST00000642115 USP35Q9P2H5 1018 aa21.11■□□□□ 0.97
LINC02228-204ENST00000642115 AKNAQ7Z591 1439 aa21.11■□□□□ 0.97
LINC02228-204ENST00000642115 KIF7Q2M1P5 1343 aa21.1■□□□□ 0.97
LINC02228-204ENST00000642115 EFCAB5A4FU69 1503 aa21.09■□□□□ 0.97
LINC02228-204ENST00000642115 SLC4A1APQ9BWU0 796 aaKnown RBP21.09■□□□□ 0.97
LINC02228-204ENST00000642115 POLA1P09884 1462 aaPredicted RBP21.08■□□□□ 0.97
LINC02228-204ENST00000642115 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.96
LINC02228-204ENST00000642115 NCOA1Q15788 1441 aa21.02■□□□□ 0.96
LINC02228-204ENST00000642115 DENND4BO75064 1496 aaPredicted RBP21.01■□□□□ 0.95
LINC02228-204ENST00000642115 ABCA10Q8WWZ4 1543 aa21.01■□□□□ 0.95
LINC02228-204ENST00000642115 TOPBP1Q92547 1522 aa21■□□□□ 0.95
LINC02228-204ENST00000642115 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
LINC02228-204ENST00000642115 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
LINC02228-204ENST00000642115 KDM6BO15054 1643 aa20.98■□□□□ 0.95
LINC02228-204ENST00000642115 GSE1Q14687 1217 aa20.98■□□□□ 0.95
LINC02228-204ENST00000642115 RNF123Q5XPI4 1314 aa20.98■□□□□ 0.95
LINC02228-204ENST00000642115 NUDCQ9Y266 331 aa20.98■□□□□ 0.95
LINC02228-204ENST00000642115 TMC1Q8TDI8 760 aa20.98■□□□□ 0.95
LINC02228-204ENST00000642115 SMG6Q86US8 1419 aaKnown RBP20.98■□□□□ 0.95
LINC02228-204ENST00000642115 PRDM2Q13029 1718 aa20.95■□□□□ 0.94
LINC02228-204ENST00000642115 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
LINC02228-204ENST00000642115 PDE4AP27815 886 aa20.94■□□□□ 0.94
LINC02228-204ENST00000642115 SUPT6HQ7KZ85 1726 aaKnown RBP20.94■□□□□ 0.94
LINC02228-204ENST00000642115 ZNF777Q9ULD5 760 aaPredicted RBP20.93■□□□□ 0.94
LINC02228-204ENST00000642115 MAGI3Q5TCQ9 1506 aa20.93■□□□□ 0.94
LINC02228-204ENST00000642115 PKNOX2Q96KN3 472 aa20.93■□□□□ 0.94
LINC02228-204ENST00000642115 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
LINC02228-204ENST00000642115 EHBP1L1Q8N3D4 1523 aa20.9■□□□□ 0.94
LINC02228-204ENST00000642115 ANKRD30BQ9BXX2 1392 aa20.9■□□□□ 0.94
LINC02228-204ENST00000642115 FRAT1Q92837 279 aaPredicted RBP20.9■□□□□ 0.94
LINC02228-204ENST00000642115 CTTNBP2Q8WZ74 1663 aa20.9■□□□□ 0.94
LINC02228-204ENST00000642115 KDM2AQ9Y2K7 1162 aa20.89■□□□□ 0.94
LINC02228-204ENST00000642115 UGGT2Q9NYU1 1516 aa20.89■□□□□ 0.93
LINC02228-204ENST00000642115 BACH2Q9BYV9 841 aa20.88■□□□□ 0.93
LINC02228-204ENST00000642115 LRRIQ1Q96JM4 1722 aa20.88■□□□□ 0.93
LINC02228-204ENST00000642115 TCERG1O14776 1098 aaKnown RBP20.88■□□□□ 0.93
LINC02228-204ENST00000642115 CDK13Q14004 1512 aaKnown RBP20.86■□□□□ 0.93
LINC02228-204ENST00000642115 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
LINC02228-204ENST00000642115 NFKBIBQ15653 356 aa20.86■□□□□ 0.93
LINC02228-204ENST00000642115 RSPH6AQ9H0K4 717 aa20.85■□□□□ 0.93
LINC02228-204ENST00000642115 CUL7Q14999 1698 aa20.85■□□□□ 0.93
LINC02228-204ENST00000642115 EXOC6Q8TAG9 804 aa20.84■□□□□ 0.93
LINC02228-204ENST00000642115 USP47Q96K76 1375 aa20.83■□□□□ 0.93
LINC02228-204ENST00000642115 PNISRQ8TF01 805 aaKnown RBP20.82■□□□□ 0.92
LINC02228-204ENST00000642115 RPRD2Q5VT52 1461 aaKnown RBP20.82■□□□□ 0.92
LINC02228-204ENST00000642115 PKD2Q13563 968 aa20.82■□□□□ 0.92
LINC02228-204ENST00000642115 URB2Q14146 1524 aaKnown RBP20.81■□□□□ 0.92
LINC02228-204ENST00000642115 DHX29Q7Z478 1369 aaKnown RBP20.8■□□□□ 0.92
LINC02228-204ENST00000642115 CARD11Q9BXL7 1154 aa20.8■□□□□ 0.92
LINC02228-204ENST00000642115 SPATA31E1Q6ZUB1 1445 aa20.8■□□□□ 0.92
LINC02228-204ENST00000642115 HECW1Q76N89 1606 aa20.79■□□□□ 0.92
LINC02228-204ENST00000642115 SLC4A3P48751 1232 aa20.79■□□□□ 0.92
LINC02228-204ENST00000642115 EPRSP07814 1512 aaKnown RBP20.78■□□□□ 0.92
LINC02228-204ENST00000642115 SAMD9Q5K651 1589 aa20.78■□□□□ 0.92
LINC02228-204ENST00000642115 SKAP1Q86WV1 359 aa20.78■□□□□ 0.92
LINC02228-204ENST00000642115 TCOF1Q13428 1488 aaKnown RBP20.77■□□□□ 0.92
LINC02228-204ENST00000642115 TEX14Q8IWB6 1497 aa20.77■□□□□ 0.92
LINC02228-204ENST00000642115 FAM43AQ8N2R8 423 aa20.76■□□□□ 0.91
LINC02228-204ENST00000642115 DCAF11Q8TEB1 546 aa20.75■□□□□ 0.91
LINC02228-204ENST00000642115 DAPK1P53355 1430 aa20.75■□□□□ 0.91
LINC02228-204ENST00000642115 MS4A1P11836 297 aa20.75■□□□□ 0.91
LINC02228-204ENST00000642115 CFDP1Q9UEE9 299 aaPredicted RBP20.75■□□□□ 0.91
LINC02228-204ENST00000642115 ST20-MTHFSA0A0A6YYL1 179 aa20.74■□□□□ 0.91
LINC02228-204ENST00000642115 PDS5BQ9NTI5 1447 aa20.74■□□□□ 0.91
LINC02228-204ENST00000642115 PLIN1O60240 522 aa20.73■□□□□ 0.91
LINC02228-204ENST00000642115 RRP1P56182 461 aaKnown RBP20.73■□□□□ 0.91
LINC02228-204ENST00000642115 ABCC5O15440 1437 aa20.73■□□□□ 0.91
LINC02228-204ENST00000642115 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
LINC02228-204ENST00000642115 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
LINC02228-204ENST00000642115 RCAN3Q9UKA8 241 aa20.73■□□□□ 0.91
LINC02228-204ENST00000642115 MIA2Q96PC5 1412 aa20.73■□□□□ 0.91
LINC02228-204ENST00000642115 DDRGK1Q96HY6 314 aa20.73■□□□□ 0.91
LINC02228-204ENST00000642115 GCC2Q8IWJ2 1684 aa20.72■□□□□ 0.91
LINC02228-204ENST00000642115 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
LINC02228-204ENST00000642115 KIF21AQ7Z4S6 1674 aa20.7■□□□□ 0.9
LINC02228-204ENST00000642115 CDCA7LQ96GN5 454 aa20.7■□□□□ 0.9
LINC02228-204ENST00000642115 FRAT2O75474 233 aaPredicted RBP20.66■□□□□ 0.9
LINC02228-204ENST00000642115 ROCK1Q13464 1354 aa20.64■□□□□ 0.89
LINC02228-204ENST00000642115 CC2D1BQ5T0F9 858 aaKnown RBP20.64■□□□□ 0.89
LINC02228-204ENST00000642115 ZMYND15Q9H091 742 aa20.64■□□□□ 0.89
LINC02228-204ENST00000642115 VSIG10Q8N0Z9 540 aa20.63■□□□□ 0.89
LINC02228-204ENST00000642115 MYBBP1AQ9BQG0 1328 aaKnown RBP20.63■□□□□ 0.89
LINC02228-204ENST00000642115 RGL3Q3MIN7 710 aa20.63■□□□□ 0.89
LINC02228-204ENST00000642115 DAXXQ9UER7 740 aaPredicted RBP20.62■□□□□ 0.89
LINC02228-204ENST00000642115 KIF15Q9NS87 1388 aa20.62■□□□□ 0.89
LINC02228-204ENST00000642115 GLIPR1L2Q4G1C9 344 aa20.61■□□□□ 0.89
LINC02228-204ENST00000642115 BCORL1Q5H9F3 1711 aa20.61■□□□□ 0.89
LINC02228-204ENST00000642115 NUP155O75694 1391 aa20.6■□□□□ 0.89
LINC02228-204ENST00000642115 RRAGDQ9NQL2 400 aaPredicted RBP20.6■□□□□ 0.89
LINC02228-204ENST00000642115 PZPP20742 1482 aa20.59■□□□□ 0.89
LINC02228-204ENST00000642115 ABCA5Q8WWZ7 1642 aa20.58■□□□□ 0.89
LINC02228-204ENST00000642115 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.89
LINC02228-204ENST00000642115 KIAA1107Q9UPP5 1409 aa20.58■□□□□ 0.89
LINC02228-204ENST00000642115 RALBP1Q15311 655 aa20.58■□□□□ 0.88
LINC02228-204ENST00000642115 FBLN2P98095 1184 aa20.56■□□□□ 0.88
LINC02228-204ENST00000642115 CRBNQ96SW2 442 aa20.56■□□□□ 0.88
LINC02228-204ENST00000642115 IQGAP2Q13576 1575 aa20.54■□□□□ 0.88
LINC02228-204ENST00000642115 ROCK2O75116 1388 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms