RNA–Protein interactions for RNA: ENST00000635852.1

LINC02009-201, Transcript of long intergenic non-protein coding RNA 2009, humanhuman

TSL 3 BASIC

Gene LINC02009, Length 2,951 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02009-201ENST00000635852 USP35Q9P2H5 1018 aa12.1□□□□□ -0.47
LINC02009-201ENST00000635852 ABCA5Q8WWZ7 1642 aa12.1□□□□□ -0.47
LINC02009-201ENST00000635852 KDM6BO15054 1643 aa12.1□□□□□ -0.47
LINC02009-201ENST00000635852 SENP3-EIF4A1A0A087X0R7 540 aa12.1□□□□□ -0.47
LINC02009-201ENST00000635852 DHX29Q7Z478 1369 aaKnown RBP12.1□□□□□ -0.47
LINC02009-201ENST00000635852 SUPT6HQ7KZ85 1726 aaKnown RBP12.09□□□□□ -0.47
LINC02009-201ENST00000635852 GCC2Q8IWJ2 1684 aa12.09□□□□□ -0.47
LINC02009-201ENST00000635852 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
LINC02009-201ENST00000635852 WASHC2CQ9Y4E1 1318 aa12.08□□□□□ -0.48
LINC02009-201ENST00000635852 LRRIQ1Q96JM4 1722 aa12.08□□□□□ -0.48
LINC02009-201ENST00000635852 TCERG1O14776 1098 aaKnown RBP12.08□□□□□ -0.48
LINC02009-201ENST00000635852 PDE4AP27815 886 aa12.07□□□□□ -0.48
LINC02009-201ENST00000635852 UGGT2Q9NYU1 1516 aa12.07□□□□□ -0.48
LINC02009-201ENST00000635852 GRIN2BQ13224 1484 aa12.07□□□□□ -0.48
LINC02009-201ENST00000635852 EHBP1L1Q8N3D4 1523 aa12.07□□□□□ -0.48
LINC02009-201ENST00000635852 CTTNBP2Q8WZ74 1663 aa12.07□□□□□ -0.48
LINC02009-201ENST00000635852 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.06□□□□□ -0.48
LINC02009-201ENST00000635852 TCOF1Q13428 1488 aaKnown RBP12.06□□□□□ -0.48
LINC02009-201ENST00000635852 RPRD2Q5VT52 1461 aaKnown RBP12.06□□□□□ -0.48
LINC02009-201ENST00000635852 ANKRD30BQ9BXX2 1392 aa12.06□□□□□ -0.48
LINC02009-201ENST00000635852 PNISRQ8TF01 805 aaKnown RBP12.06□□□□□ -0.48
LINC02009-201ENST00000635852 POLR1AO95602 1720 aaPredicted RBP12.06□□□□□ -0.48
LINC02009-201ENST00000635852 TEX14Q8IWB6 1497 aa12.05□□□□□ -0.48
LINC02009-201ENST00000635852 RAD54L2Q9Y4B4 1467 aa12.05□□□□□ -0.48
LINC02009-201ENST00000635852 ARHGEF11O15085 1522 aa12.05□□□□□ -0.48
LINC02009-201ENST00000635852 PPM1GO15355 546 aaPredicted RBP12.05□□□□□ -0.48
LINC02009-201ENST00000635852 EXOC6Q8TAG9 804 aa12.05□□□□□ -0.48
LINC02009-201ENST00000635852 BACH2Q9BYV9 841 aa12.05□□□□□ -0.48
LINC02009-201ENST00000635852 RRP1P56182 461 aaKnown RBP12.04□□□□□ -0.48
LINC02009-201ENST00000635852 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
LINC02009-201ENST00000635852 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
LINC02009-201ENST00000635852 MAGI3Q5TCQ9 1506 aa12.03□□□□□ -0.48
LINC02009-201ENST00000635852 MS4A1P11836 297 aa12.02□□□□□ -0.49
LINC02009-201ENST00000635852 CUL7Q14999 1698 aa12.02□□□□□ -0.49
LINC02009-201ENST00000635852 THOC2Q8NI27 1593 aaKnown RBP12.02□□□□□ -0.49
LINC02009-201ENST00000635852 TMC1Q8TDI8 760 aa12.02□□□□□ -0.49
LINC02009-201ENST00000635852 SAMD9Q5K651 1589 aa12.02□□□□□ -0.49
LINC02009-201ENST00000635852 MIA2Q96PC5 1412 aa12.02□□□□□ -0.49
LINC02009-201ENST00000635852 BRPF3Q9ULD4 1205 aa12□□□□□ -0.49
LINC02009-201ENST00000635852 RCAN3Q9UKA8 241 aa11.98□□□□□ -0.49
LINC02009-201ENST00000635852 LRPPRCP42704 1394 aaKnown RBP11.98□□□□□ -0.49
LINC02009-201ENST00000635852 POLA1P09884 1462 aaPredicted RBP11.98□□□□□ -0.49
LINC02009-201ENST00000635852 BCORL1Q5H9F3 1711 aa11.98□□□□□ -0.49
LINC02009-201ENST00000635852 GSE1Q14687 1217 aa11.98□□□□□ -0.49
LINC02009-201ENST00000635852 SLC4A1APQ9BWU0 796 aaKnown RBP11.98□□□□□ -0.49
LINC02009-201ENST00000635852 USP47Q96K76 1375 aa11.98□□□□□ -0.49
LINC02009-201ENST00000635852 LAMC3Q9Y6N6 1575 aa11.97□□□□□ -0.49
LINC02009-201ENST00000635852 FANCD2Q9BXW9 1451 aa11.97□□□□□ -0.49
LINC02009-201ENST00000635852 ARID4BQ4LE39 1312 aaPredicted RBP11.97□□□□□ -0.49
LINC02009-201ENST00000635852 UBE2Q2Q8WVN8 375 aa11.96□□□□□ -0.49
LINC02009-201ENST00000635852 DDRGK1Q96HY6 314 aa11.96□□□□□ -0.49
LINC02009-201ENST00000635852 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.5
LINC02009-201ENST00000635852 NFKBIBQ15653 356 aa11.94□□□□□ -0.5
LINC02009-201ENST00000635852 ZNF326Q5BKZ1 582 aaKnown RBP11.94□□□□□ -0.5
LINC02009-201ENST00000635852 BRD4O60885 1362 aaPredicted RBP11.94□□□□□ -0.5
LINC02009-201ENST00000635852 ROCK1Q13464 1354 aa11.94□□□□□ -0.5
LINC02009-201ENST00000635852 TOPBP1Q92547 1522 aa11.94□□□□□ -0.5
LINC02009-201ENST00000635852 ROCK2O75116 1388 aaKnown RBP11.93□□□□□ -0.5
LINC02009-201ENST00000635852 KIF15Q9NS87 1388 aa11.93□□□□□ -0.5
LINC02009-201ENST00000635852 MBD5Q9P267 1494 aa11.93□□□□□ -0.5
LINC02009-201ENST00000635852 SKAP1Q86WV1 359 aa11.93□□□□□ -0.5
LINC02009-201ENST00000635852 NESP48681 1621 aa11.92□□□□□ -0.5
LINC02009-201ENST00000635852 FRAT1Q92837 279 aaPredicted RBP11.92□□□□□ -0.5
LINC02009-201ENST00000635852 MYBBP1AQ9BQG0 1328 aaKnown RBP11.92□□□□□ -0.5
LINC02009-201ENST00000635852 DAPK1P53355 1430 aa11.92□□□□□ -0.5
LINC02009-201ENST00000635852 KDM5CP41229 1560 aa11.91□□□□□ -0.5
LINC02009-201ENST00000635852 SLC4A3P48751 1232 aa11.91□□□□□ -0.5
LINC02009-201ENST00000635852 PDE3BQ13370 1112 aa11.91□□□□□ -0.5
LINC02009-201ENST00000635852 RALBP1Q15311 655 aa11.9□□□□□ -0.5
LINC02009-201ENST00000635852 ABCC5O15440 1437 aa11.9□□□□□ -0.5
LINC02009-201ENST00000635852 EPRSP07814 1512 aaKnown RBP11.9□□□□□ -0.51
LINC02009-201ENST00000635852 PLIN1O60240 522 aa11.89□□□□□ -0.51
LINC02009-201ENST00000635852 EIF5BO60841 1220 aaKnown RBP11.89□□□□□ -0.51
LINC02009-201ENST00000635852 CDCA7LQ96GN5 454 aa11.89□□□□□ -0.51
LINC02009-201ENST00000635852 PZPP20742 1482 aa11.89□□□□□ -0.51
LINC02009-201ENST00000635852 KTN1Q86UP2 1357 aaKnown RBP11.88□□□□□ -0.51
LINC02009-201ENST00000635852 CRBNQ96SW2 442 aa11.88□□□□□ -0.51
LINC02009-201ENST00000635852 KIF21AQ7Z4S6 1674 aa11.88□□□□□ -0.51
LINC02009-201ENST00000635852 ARID3CA6NKF2 412 aa11.88□□□□□ -0.51
LINC02009-201ENST00000635852 CDK13Q14004 1512 aaKnown RBP11.87□□□□□ -0.51
LINC02009-201ENST00000635852 TDRD9Q8NDG6 1382 aaKnown RBP11.87□□□□□ -0.51
LINC02009-201ENST00000635852 KIF14Q15058 1648 aa11.87□□□□□ -0.51
LINC02009-201ENST00000635852 ZNF644Q9H582 1327 aaPredicted RBP11.87□□□□□ -0.51
LINC02009-201ENST00000635852 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
LINC02009-201ENST00000635852 CARD11Q9BXL7 1154 aa11.86□□□□□ -0.51
LINC02009-201ENST00000635852 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
LINC02009-201ENST00000635852 DNMT1P26358 1616 aaKnown RBP11.85□□□□□ -0.51
LINC02009-201ENST00000635852 KIAA1107Q9UPP5 1409 aa11.85□□□□□ -0.51
LINC02009-201ENST00000635852 NLRP13Q86W25 1043 aa11.85□□□□□ -0.51
LINC02009-201ENST00000635852 ST20-MTHFSA0A0A6YYL1 179 aa11.84□□□□□ -0.51
LINC02009-201ENST00000635852 RALGAPBQ86X10 1494 aa11.84□□□□□ -0.51
LINC02009-201ENST00000635852 UHRF1BP1Q6BDS2 1440 aa11.83□□□□□ -0.52
LINC02009-201ENST00000635852 PKD2Q13563 968 aa11.83□□□□□ -0.52
LINC02009-201ENST00000635852 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
LINC02009-201ENST00000635852 FRAT2O75474 233 aaPredicted RBP11.82□□□□□ -0.52
LINC02009-201ENST00000635852 KDM2BQ8NHM5 1336 aa11.82□□□□□ -0.52
LINC02009-201ENST00000635852 FAM43AQ8N2R8 423 aa11.82□□□□□ -0.52
LINC02009-201ENST00000635852 C20orf194Q5TEA3 1177 aa11.81□□□□□ -0.52
LINC02009-201ENST00000635852 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
LINC02009-201ENST00000635852 PARD3Q8TEW0 1356 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms