RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 PRKRIP1Q9H875 184 aaPredicted RBP19.64■□□□□ 0.73
PTBP1-221ENST00000635647 NPM2Q86SE8 214 aaKnown RBP19.64■□□□□ 0.73
PTBP1-221ENST00000635647 TMC1Q8TDI8 760 aa19.63■□□□□ 0.73
PTBP1-221ENST00000635647 PKD2Q13563 968 aa19.62■□□□□ 0.73
PTBP1-221ENST00000635647 SUPT6HQ7KZ85 1726 aaKnown RBP19.6■□□□□ 0.73
PTBP1-221ENST00000635647 EHBP1L1Q8N3D4 1523 aa19.6■□□□□ 0.73
PTBP1-221ENST00000635647 CCDC136Q96JN2 1154 aa19.6■□□□□ 0.73
PTBP1-221ENST00000635647 CTTNBP2Q8WZ74 1663 aa19.59■□□□□ 0.73
PTBP1-221ENST00000635647 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
PTBP1-221ENST00000635647 TSPY4P0CV99 314 aa19.58■□□□□ 0.72
PTBP1-221ENST00000635647 TSPY10P0CW01 314 aa19.58■□□□□ 0.72
PTBP1-221ENST00000635647 ANO8Q9HCE9 1232 aaPredicted RBP19.56■□□□□ 0.72
PTBP1-221ENST00000635647 PPP4R2Q9NY27 417 aa19.56■□□□□ 0.72
PTBP1-221ENST00000635647 MSH5O43196 834 aa19.56■□□□□ 0.72
PTBP1-221ENST00000635647 CCDC7Q96M83 1385 aa19.56■□□□□ 0.72
PTBP1-221ENST00000635647 EIF5BO60841 1220 aaKnown RBP19.55■□□□□ 0.72
PTBP1-221ENST00000635647 KIF7Q2M1P5 1343 aa19.55■□□□□ 0.72
PTBP1-221ENST00000635647 EPRSP07814 1512 aaKnown RBP19.55■□□□□ 0.72
PTBP1-221ENST00000635647 CARD11Q9BXL7 1154 aa19.55■□□□□ 0.72
PTBP1-221ENST00000635647 PLEKHD1A6NEE1 506 aa19.54■□□□□ 0.72
PTBP1-221ENST00000635647 CNTLNQ9NXG0 1405 aa19.51■□□□□ 0.71
PTBP1-221ENST00000635647 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.51■□□□□ 0.71
PTBP1-221ENST00000635647 MAGI3Q5TCQ9 1506 aa19.51■□□□□ 0.71
PTBP1-221ENST00000635647 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
PTBP1-221ENST00000635647 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
PTBP1-221ENST00000635647 UGGT2Q9NYU1 1516 aa19.48■□□□□ 0.71
PTBP1-221ENST00000635647 THOC2Q8NI27 1593 aaKnown RBP19.46■□□□□ 0.71
PTBP1-221ENST00000635647 PRG4Q92954 1404 aaPredicted RBP19.46■□□□□ 0.71
PTBP1-221ENST00000635647 NUP155O75694 1391 aa19.46■□□□□ 0.71
PTBP1-221ENST00000635647 HNRNPMP52272 730 aaKnown RBP eCLIP19.45■□□□□ 0.74e-7■■■■□ 20
PTBP1-221ENST00000635647 HECW1Q76N89 1606 aa19.45■□□□□ 0.7
PTBP1-221ENST00000635647 DAPK1P53355 1430 aa19.44■□□□□ 0.7
PTBP1-221ENST00000635647 IQGAP2Q13576 1575 aa19.44■□□□□ 0.7
PTBP1-221ENST00000635647 CHGAP10645 457 aaKnown RBP19.44■□□□□ 0.7
PTBP1-221ENST00000635647 MIA2Q96PC5 1412 aa19.43■□□□□ 0.7
PTBP1-221ENST00000635647 ANKRD30BQ9BXX2 1392 aa19.43■□□□□ 0.7
PTBP1-221ENST00000635647 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
PTBP1-221ENST00000635647 ZNF608Q9ULD9 1512 aaPredicted RBP19.42■□□□□ 0.7
PTBP1-221ENST00000635647 CC2D1BQ5T0F9 858 aaKnown RBP19.42■□□□□ 0.7
PTBP1-221ENST00000635647 SAMD9Q5K651 1589 aa19.42■□□□□ 0.7
PTBP1-221ENST00000635647 USP47Q96K76 1375 aa19.42■□□□□ 0.7
PTBP1-221ENST00000635647 KDM6BO15054 1643 aa19.41■□□□□ 0.7
PTBP1-221ENST00000635647 ABCC5O15440 1437 aa19.41■□□□□ 0.7
PTBP1-221ENST00000635647 ZBED9Q6R2W3 1325 aa19.41■□□□□ 0.7
PTBP1-221ENST00000635647 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
PTBP1-221ENST00000635647 ST20-MTHFSA0A0A6YYL1 179 aa19.4■□□□□ 0.7
PTBP1-221ENST00000635647 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
PTBP1-221ENST00000635647 ANKRD30AQ9BXX3 1397 aa19.38■□□□□ 0.69
PTBP1-221ENST00000635647 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
PTBP1-221ENST00000635647 NCOA1Q15788 1441 aa19.35■□□□□ 0.69
PTBP1-221ENST00000635647 LRRIQ1Q96JM4 1722 aa19.34■□□□□ 0.69
PTBP1-221ENST00000635647 ANP32AP39687 249 aaKnown RBP19.33■□□□□ 0.69
PTBP1-221ENST00000635647 TCOF1Q13428 1488 aaKnown RBP19.32■□□□□ 0.68
PTBP1-221ENST00000635647 PLB1Q6P1J6 1458 aa19.32■□□□□ 0.68
PTBP1-221ENST00000635647 NUDCQ9Y266 331 aa19.32■□□□□ 0.68
PTBP1-221ENST00000635647 AKNAQ7Z591 1439 aa19.32■□□□□ 0.68
PTBP1-221ENST00000635647 RPRD2Q5VT52 1461 aaKnown RBP19.32■□□□□ 0.68
PTBP1-221ENST00000635647 MRC2Q9UBG0 1479 aa19.32■□□□□ 0.68
PTBP1-221ENST00000635647 NOP58Q9Y2X3 529 aaKnown RBP19.31■□□□□ 0.68
PTBP1-221ENST00000635647 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
PTBP1-221ENST00000635647 DAXXQ9UER7 740 aaPredicted RBP19.31■□□□□ 0.68
PTBP1-221ENST00000635647 ERICH6BQ5W0A0 696 aa19.3■□□□□ 0.68
PTBP1-221ENST00000635647 ZBTB47Q9UFB7 747 aaPredicted RBP19.29■□□□□ 0.68
PTBP1-221ENST00000635647 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
PTBP1-221ENST00000635647 ROCK1Q13464 1354 aa19.29■□□□□ 0.68
PTBP1-221ENST00000635647 CARMIL2Q6F5E8 1435 aa19.29■□□□□ 0.68
PTBP1-221ENST00000635647 ROCK2O75116 1388 aaKnown RBP19.28■□□□□ 0.68
PTBP1-221ENST00000635647 KIAA0586Q9BVV6 1533 aa19.27■□□□□ 0.68
PTBP1-221ENST00000635647 NUP153P49790 1475 aaKnown RBP19.27■□□□□ 0.68
PTBP1-221ENST00000635647 TROQ12816 1431 aaPredicted RBP19.26■□□□□ 0.67
PTBP1-221ENST00000635647 KDM5BQ9UGL1 1544 aa19.26■□□□□ 0.67
PTBP1-221ENST00000635647 WDR62O43379 1518 aa19.26■□□□□ 0.67
PTBP1-221ENST00000635647 LAS1LQ9Y4W2 734 aaKnown RBP19.25■□□□□ 0.67
PTBP1-221ENST00000635647 KIAA1107Q9UPP5 1409 aa19.24■□□□□ 0.67
PTBP1-221ENST00000635647 CAMSAP2Q08AD1 1489 aa19.24■□□□□ 0.67
PTBP1-221ENST00000635647 FANCIQ9NVI1 1328 aa19.23■□□□□ 0.67
PTBP1-221ENST00000635647 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
PTBP1-221ENST00000635647 TNNT2P45379 298 aaPredicted RBP19.23■□□□□ 0.67
PTBP1-221ENST00000635647 ARHGEF11O15085 1522 aa19.22■□□□□ 0.67
PTBP1-221ENST00000635647 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
PTBP1-221ENST00000635647 ADAMTS12P58397 1594 aa19.21■□□□□ 0.67
PTBP1-221ENST00000635647 IL27Q8NEV9 243 aa19.21■□□□□ 0.67
PTBP1-221ENST00000635647 NBPF1Q3BBV0 1214 aa19.2■□□□□ 0.66
PTBP1-221ENST00000635647 PNISRQ8TF01 805 aaKnown RBP19.2■□□□□ 0.66
PTBP1-221ENST00000635647 KIF15Q9NS87 1388 aa19.19■□□□□ 0.66
PTBP1-221ENST00000635647 NEUROD2Q15784 382 aa19.19■□□□□ 0.66
PTBP1-221ENST00000635647 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
PTBP1-221ENST00000635647 PAK3O75914 559 aaPredicted RBP19.19■□□□□ 0.66
PTBP1-221ENST00000635647 DISP1Q96F81 1524 aa19.18■□□□□ 0.66
PTBP1-221ENST00000635647 PBRM1Q86U86 1689 aa19.18■□□□□ 0.66
PTBP1-221ENST00000635647 GCC2Q8IWJ2 1684 aa19.18■□□□□ 0.66
PTBP1-221ENST00000635647 TEX14Q8IWB6 1497 aa19.18■□□□□ 0.66
PTBP1-221ENST00000635647 CANXP27824 592 aaKnown RBP19.18■□□□□ 0.66
PTBP1-221ENST00000635647 GPATCH8Q9UKJ3 1502 aaKnown RBP19.17■□□□□ 0.66
PTBP1-221ENST00000635647 EXOC6Q8TAG9 804 aa19.16■□□□□ 0.66
PTBP1-221ENST00000635647 PLIN1O60240 522 aa19.15■□□□□ 0.66
PTBP1-221ENST00000635647 RCAN3Q9UKA8 241 aa19.15■□□□□ 0.66
PTBP1-221ENST00000635647 MYBBP1AQ9BQG0 1328 aaKnown RBP19.15■□□□□ 0.66
PTBP1-221ENST00000635647 C9orf84Q5VXU9 1444 aa19.15■□□□□ 0.66
PTBP1-221ENST00000635647 WDR43Q15061 677 aaKnown RBP eCLIP19.14■□□□□ 0.668e-6■■□□□ 11.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms