RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 HS3ST6Q96QI5 342 aa7□□□□□ -1.29
CHD2-220ENST00000630813 KIF21BO75037 1637 aa7□□□□□ -1.29
CHD2-220ENST00000630813 GOLGA3Q08378 1498 aa6.99□□□□□ -1.29
CHD2-220ENST00000630813 FAM205CA6NFA0 338 aa6.99□□□□□ -1.29
CHD2-220ENST00000630813 ZBTB47Q9UFB7 747 aaPredicted RBP6.99□□□□□ -1.29
CHD2-220ENST00000630813 RAPGEF2Q9Y4G8 1499 aa6.98□□□□□ -1.29
CHD2-220ENST00000630813 POTEB3A0JP26 581 aa6.98□□□□□ -1.29
CHD2-220ENST00000630813 POTEBQ6S5H4 581 aa6.98□□□□□ -1.29
CHD2-220ENST00000630813 C3orf67Q6ZVT6 689 aa6.98□□□□□ -1.29
CHD2-220ENST00000630813 PRXQ9BXM0 1461 aa6.97□□□□□ -1.29
CHD2-220ENST00000630813 CEP164Q9UPV0 1460 aa6.97□□□□□ -1.29
CHD2-220ENST00000630813 PRDM2Q13029 1718 aa6.96□□□□□ -1.29
CHD2-220ENST00000630813 NESP48681 1621 aa6.95□□□□□ -1.3
CHD2-220ENST00000630813 UBTFP17480 764 aaKnown RBP6.95□□□□□ -1.3
CHD2-220ENST00000630813 FANCD2Q9BXW9 1451 aa6.92□□□□□ -1.3
CHD2-220ENST00000630813 PYGBP11216 843 aa6.91□□□□□ -1.3
CHD2-220ENST00000630813 PDCD7Q8N8D1 485 aaKnown RBP6.91□□□□□ -1.3
CHD2-220ENST00000630813 L3MBTL3Q96JM7 780 aaPredicted RBP6.91□□□□□ -1.3
CHD2-220ENST00000630813 IGF1RP08069 1367 aa6.91□□□□□ -1.3
CHD2-220ENST00000630813 CLIP1P30622 1438 aa6.91□□□□□ -1.3
CHD2-220ENST00000630813 FGD5Q6ZNL6 1462 aa6.91□□□□□ -1.3
CHD2-220ENST00000630813 ERICH3Q5RHP9 1530 aa6.91□□□□□ -1.3
CHD2-220ENST00000630813 PCDHB8Q9UN66 801 aa6.9□□□□□ -1.3
CHD2-220ENST00000630813 KIF27Q86VH2 1401 aa6.9□□□□□ -1.31
CHD2-220ENST00000630813 ARAP1Q96P48 1450 aa6.89□□□□□ -1.31
CHD2-220ENST00000630813 CUX2O14529 1486 aa6.88□□□□□ -1.31
CHD2-220ENST00000630813 RAD54L2Q9Y4B4 1467 aa6.88□□□□□ -1.31
CHD2-220ENST00000630813 GOLGA2Q08379 1002 aa6.88□□□□□ -1.31
CHD2-220ENST00000630813 DCAF8Q5TAQ9 597 aa6.88□□□□□ -1.31
CHD2-220ENST00000630813 RNF166Q96A37 237 aaPredicted RBP6.88□□□□□ -1.31
CHD2-220ENST00000630813 URB2Q14146 1524 aaKnown RBP6.87□□□□□ -1.31
CHD2-220ENST00000630813 TOPBP1Q92547 1522 aa6.87□□□□□ -1.31
CHD2-220ENST00000630813 VPS8Q8N3P4 1428 aa6.87□□□□□ -1.31
CHD2-220ENST00000630813 TTBK1Q5TCY1 1321 aaPredicted RBP6.87□□□□□ -1.31
CHD2-220ENST00000630813 MKRN3Q13064 507 aaKnown RBP6.87□□□□□ -1.31
CHD2-220ENST00000630813 DNMBPQ6XZF7 1577 aa6.86□□□□□ -1.31
CHD2-220ENST00000630813 POLA1P09884 1462 aaPredicted RBP6.85□□□□□ -1.31
CHD2-220ENST00000630813 LAMC3Q9Y6N6 1575 aa6.85□□□□□ -1.31
CHD2-220ENST00000630813 RANGAP1P46060 587 aaPredicted RBP6.84□□□□□ -1.31
CHD2-220ENST00000630813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.84□□□□□ -1.312e-7■■□□□ 11.7
CHD2-220ENST00000630813 ABCA10Q8WWZ4 1543 aa6.84□□□□□ -1.31
CHD2-220ENST00000630813 ARHGAP35Q9NRY4 1499 aa6.84□□□□□ -1.31
CHD2-220ENST00000630813 CARMIL1Q5VZK9 1371 aa6.83□□□□□ -1.32
CHD2-220ENST00000630813 ERBB3P21860 1342 aa6.82□□□□□ -1.32
CHD2-220ENST00000630813 WDR97A6NE52 1622 aa6.81□□□□□ -1.32
CHD2-220ENST00000630813 HOXB3P14651 431 aaPredicted RBP6.81□□□□□ -1.32
CHD2-220ENST00000630813 KANK4Q5T7N3 995 aaPredicted RBP6.81□□□□□ -1.32
CHD2-220ENST00000630813 ZNF710Q8N1W2 664 aa6.81□□□□□ -1.32
CHD2-220ENST00000630813 MYT1LQ9UL68 1186 aa6.81□□□□□ -1.32
CHD2-220ENST00000630813 KIF21AQ7Z4S6 1674 aa6.81□□□□□ -1.32
CHD2-220ENST00000630813 HOXB1P14653 301 aaPredicted RBP6.8□□□□□ -1.32
CHD2-220ENST00000630813 ZNF467Q7Z7K2 595 aaPredicted RBP6.79□□□□□ -1.32
CHD2-220ENST00000630813 PDS5BQ9NTI5 1447 aa6.78□□□□□ -1.32
CHD2-220ENST00000630813 ABCA5Q8WWZ7 1642 aa6.78□□□□□ -1.32
CHD2-220ENST00000630813 TARBP1Q13395 1621 aaKnown RBP6.77□□□□□ -1.33
CHD2-220ENST00000630813 G3V3G9 751 aa6.77□□□□□ -1.33
CHD2-220ENST00000630813 ZEB1P37275 1124 aaPredicted RBP6.77□□□□□ -1.33
CHD2-220ENST00000630813 DOK7Q18PE1 504 aa6.77□□□□□ -1.33
CHD2-220ENST00000630813 TDRD9Q8NDG6 1382 aaKnown RBP6.77□□□□□ -1.33
CHD2-220ENST00000630813 VARS2Q5ST30 1063 aaKnown RBP6.76□□□□□ -1.33
CHD2-220ENST00000630813 DPY19L2Q6NUT2 758 aa6.76□□□□□ -1.33
CHD2-220ENST00000630813 PSEN1P49768 467 aa6.75□□□□□ -1.33
CHD2-220ENST00000630813 BOLA1Q9Y3E2 137 aa6.75□□□□□ -1.33
CHD2-220ENST00000630813 GAPVD1Q14C86 1478 aa6.74□□□□□ -1.33
CHD2-220ENST00000630813 ILDR1Q86SU0 546 aaPredicted RBP6.74□□□□□ -1.33
CHD2-220ENST00000630813 RIMBP2O15034 1052 aa6.73□□□□□ -1.33
CHD2-220ENST00000630813 CUL7Q14999 1698 aa6.73□□□□□ -1.33
CHD2-220ENST00000630813 P3H3Q8IVL6 736 aa6.72□□□□□ -1.33
CHD2-220ENST00000630813 CCER1Q8TC90 406 aaPredicted RBP6.72□□□□□ -1.33
CHD2-220ENST00000630813 FHOD3Q2V2M9 1422 aa6.72□□□□□ -1.33
CHD2-220ENST00000630813 RRBP1Q9P2E9 1410 aaKnown RBP6.72□□□□□ -1.33
CHD2-220ENST00000630813 AQRO60306 1485 aaKnown RBP eCLIP6.72□□□□□ -1.331e-10■■■■□ 26.3
CHD2-220ENST00000630813 MRC2Q9UBG0 1479 aa6.72□□□□□ -1.33
CHD2-220ENST00000630813 PTGER2P43116 358 aa6.71□□□□□ -1.34
CHD2-220ENST00000630813 GSE1Q14687 1217 aa6.71□□□□□ -1.34
CHD2-220ENST00000630813 ZNF687Q8N1G0 1237 aa6.71□□□□□ -1.34
CHD2-220ENST00000630813 MAP3K1Q13233 1512 aa6.71□□□□□ -1.34
CHD2-220ENST00000630813 TIAM1Q13009 1591 aa6.7□□□□□ -1.34
CHD2-220ENST00000630813 WDR62O43379 1518 aa6.7□□□□□ -1.34
CHD2-220ENST00000630813 ZNF608Q9ULD9 1512 aaPredicted RBP6.7□□□□□ -1.34
CHD2-220ENST00000630813 PCF11O94913 1555 aaKnown RBP6.69□□□□□ -1.34
CHD2-220ENST00000630813 CTTNBP2Q8WZ74 1663 aa6.69□□□□□ -1.34
CHD2-220ENST00000630813 SAMD9Q5K651 1589 aa6.69□□□□□ -1.34
CHD2-220ENST00000630813 SNAPC4Q5SXM2 1469 aa6.68□□□□□ -1.34
CHD2-220ENST00000630813 LRRC9Q6ZRR7 1453 aa6.68□□□□□ -1.34
CHD2-220ENST00000630813 CHRM1P11229 460 aaPredicted RBP6.68□□□□□ -1.34
CHD2-220ENST00000630813 CABP2Q9NPB3 220 aa6.68□□□□□ -1.34
CHD2-220ENST00000630813 PHLDB1Q86UU1 1377 aa6.68□□□□□ -1.34
CHD2-220ENST00000630813 CASKIN1Q8WXD9 1431 aa6.67□□□□□ -1.34
CHD2-220ENST00000630813 EFCAB5A4FU69 1503 aa6.67□□□□□ -1.34
CHD2-220ENST00000630813 ADAMTS12P58397 1594 aa6.67□□□□□ -1.34
CHD2-220ENST00000630813 PDAP1Q13442 181 aaKnown RBP6.67□□□□□ -1.34
CHD2-220ENST00000630813 PBRM1Q86U86 1689 aa6.67□□□□□ -1.34
CHD2-220ENST00000630813 CFAP43Q8NDM7 1665 aa6.67□□□□□ -1.34
CHD2-220ENST00000630813 LRRIQ1Q96JM4 1722 aa6.67□□□□□ -1.34
CHD2-220ENST00000630813 ANKRD13DQ6ZTN6 518 aa6.66□□□□□ -1.34
CHD2-220ENST00000630813 CCNB3Q8WWL7 1395 aa6.66□□□□□ -1.34
CHD2-220ENST00000630813 FHAD1B1AJZ9 1412 aa6.66□□□□□ -1.34
CHD2-220ENST00000630813 IFT140Q96RY7 1462 aa6.66□□□□□ -1.34
CHD2-220ENST00000630813 THOC2Q8NI27 1593 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms