RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 AEBP2Q6ZN18 517 aaPredicted RBP15.63■□□□□ 0.09
CHD2-220ENST00000630813 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
CHD2-220ENST00000630813 SENP3Q9H4L4 574 aaPredicted RBP13.43□□□□□ -0.26
CHD2-220ENST00000630813 PHF23Q9BUL5 403 aaPredicted RBP13.18□□□□□ -0.3
CHD2-220ENST00000630813 FOXD1Q16676 465 aa12.56□□□□□ -0.4
CHD2-220ENST00000630813 POTEDQ86YR6 584 aa12.37□□□□□ -0.43
CHD2-220ENST00000630813 MSH5O43196 834 aa11.93□□□□□ -0.5
CHD2-220ENST00000630813 PIAS4Q8N2W9 510 aaPredicted RBP11.65□□□□□ -0.54
CHD2-220ENST00000630813 PPP6R1Q9UPN7 881 aa11.4□□□□□ -0.58
CHD2-220ENST00000630813 ADRA2BP18089 450 aa11.36□□□□□ -0.59
CHD2-220ENST00000630813 PLPPR3Q6T4P5 718 aa11.35□□□□□ -0.59
CHD2-220ENST00000630813 DMRT2Q9Y5R5 561 aa10.57□□□□□ -0.72
CHD2-220ENST00000630813 MAPK8IP2Q13387 824 aaPredicted RBP10.56□□□□□ -0.72
CHD2-220ENST00000630813 CACNB1Q02641 598 aaPredicted RBP10.51□□□□□ -0.73
CHD2-220ENST00000630813 SCAF1Q9H7N4 1312 aaKnown RBP10.4□□□□□ -0.74
CHD2-220ENST00000630813 DCAF8L1A6NGE4 600 aa10.21□□□□□ -0.77
CHD2-220ENST00000630813 RNF39Q9H2S5 420 aa10.12□□□□□ -0.79
CHD2-220ENST00000630813 HOXD11P31277 338 aaPredicted RBP9.99□□□□□ -0.81
CHD2-220ENST00000630813 C1QBPQ07021 282 aaKnown RBP9.96□□□□□ -0.82
CHD2-220ENST00000630813 PPP4R3CPQ6ZMV5 832 aa9.89□□□□□ -0.83
CHD2-220ENST00000630813 RNF216Q9NWF9 866 aaPredicted RBP9.82□□□□□ -0.84
CHD2-220ENST00000630813 CNKSR2Q8WXI2 1034 aa9.8□□□□□ -0.84
CHD2-220ENST00000630813 NISCHQ9Y2I1 1504 aa9.72□□□□□ -0.85
CHD2-220ENST00000630813 DNAJC5BQ9UF47 199 aa9.72□□□□□ -0.85
CHD2-220ENST00000630813 POTEHQ6S545 545 aa9.62□□□□□ -0.87
CHD2-220ENST00000630813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.57□□□□□ -0.882e-10■■□□□ 13
CHD2-220ENST00000630813 NCBP3Q53F19 620 aaKnown RBP9.39□□□□□ -0.91
CHD2-220ENST00000630813 DSG3P32926 999 aa9.34□□□□□ -0.91
CHD2-220ENST00000630813 CAPN15O75808 1086 aa9.33□□□□□ -0.92
CHD2-220ENST00000630813 SPINK5Q9NQ38 1064 aaPredicted RBP9.3□□□□□ -0.92
CHD2-220ENST00000630813 U3KPZ7 1027 aaPredicted RBP9.29□□□□□ -0.92
CHD2-220ENST00000630813 NPM3O75607 178 aaKnown RBP9.24□□□□□ -0.93
CHD2-220ENST00000630813 TRHP20396 242 aaPredicted RBP9.07□□□□□ -0.96
CHD2-220ENST00000630813 ABCB7O75027 752 aa9.06□□□□□ -0.96
CHD2-220ENST00000630813 ZNF219Q9P2Y4 722 aaPredicted RBP9.02□□□□□ -0.97
CHD2-220ENST00000630813 APLP2Q06481 763 aa9.01□□□□□ -0.97
CHD2-220ENST00000630813 RBM42Q9BTD8 480 aaKnown RBP8.94□□□□□ -0.98
CHD2-220ENST00000630813 SLC4A2P04920 1241 aa8.93□□□□□ -0.98
CHD2-220ENST00000630813 CHRDL2Q6WN34 429 aa8.91□□□□□ -0.98
CHD2-220ENST00000630813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.9□□□□□ -0.98
CHD2-220ENST00000630813 HNRNPUL2Q1KMD3 747 aaKnown RBP8.9□□□□□ -0.98
CHD2-220ENST00000630813 SAMD1Q6SPF0 538 aaPredicted RBP8.82□□□□□ -1
CHD2-220ENST00000630813 SP7Q8TDD2 431 aaPredicted RBP8.81□□□□□ -1
CHD2-220ENST00000630813 POLA2Q14181 598 aa8.72□□□□□ -1.01
CHD2-220ENST00000630813 KCNA4P22459 653 aa8.68□□□□□ -1.02
CHD2-220ENST00000630813 AKT1S1Q96B36 256 aa8.63□□□□□ -1.03
CHD2-220ENST00000630813 PIP4P2Q8N4L2 257 aa8.6□□□□□ -1.03
CHD2-220ENST00000630813 HAX1O00165 279 aa8.59□□□□□ -1.03
CHD2-220ENST00000630813 MYCNP04198 464 aaPredicted RBP8.56□□□□□ -1.04
CHD2-220ENST00000630813 REM2Q8IYK8 340 aaPredicted RBP8.56□□□□□ -1.04
CHD2-220ENST00000630813 ZBTB12Q9Y330 459 aaPredicted RBP8.51□□□□□ -1.05
CHD2-220ENST00000630813 PITPNM1O00562 1244 aa8.47□□□□□ -1.05
CHD2-220ENST00000630813 FXR2P51116 673 aaKnown RBP eCLIP8.47□□□□□ -1.051e-8■■■□□ 16
CHD2-220ENST00000630813 OSCARQ8IYS5 282 aa8.46□□□□□ -1.06
CHD2-220ENST00000630813 EVX2Q03828 476 aa8.42□□□□□ -1.06
CHD2-220ENST00000630813 ATF5Q9Y2D1 282 aaPredicted RBP8.39□□□□□ -1.07
CHD2-220ENST00000630813 CCDC180Q9P1Z9 1646 aa8.32□□□□□ -1.08
CHD2-220ENST00000630813 PRKAR2AP13861 404 aaKnown RBP8.26□□□□□ -1.09
CHD2-220ENST00000630813 LHX8Q68G74 356 aa8.26□□□□□ -1.09
CHD2-220ENST00000630813 FOXD4L1Q9NU39 408 aa8.24□□□□□ -1.09
CHD2-220ENST00000630813 C19orf67A6NJJ6 358 aa8.21□□□□□ -1.1
CHD2-220ENST00000630813 GABBR2O75899 941 aa8.21□□□□□ -1.1
CHD2-220ENST00000630813 CLEC11AQ9Y240 323 aa8.2□□□□□ -1.1
CHD2-220ENST00000630813 ZCCHC6Q5VYS8 1495 aaKnown RBP8.19□□□□□ -1.1
CHD2-220ENST00000630813 SPDYE2BA6NHP3 402 aa8.19□□□□□ -1.1
CHD2-220ENST00000630813 SPDYE6P0CI01 402 aa8.19□□□□□ -1.1
CHD2-220ENST00000630813 SPDYE2Q495Y8 402 aa8.19□□□□□ -1.1
CHD2-220ENST00000630813 SPDYE1Q8NFV5 336 aaPredicted RBP8.17□□□□□ -1.1
CHD2-220ENST00000630813 PLSCR2Q9NRY7 297 aa8.13□□□□□ -1.11
CHD2-220ENST00000630813 FBLN2P98095 1184 aa8.12□□□□□ -1.11
CHD2-220ENST00000630813 SLC4A1APQ9BWU0 796 aaKnown RBP8.12□□□□□ -1.11
CHD2-220ENST00000630813 SHROOM4Q9ULL8 1493 aa8.09□□□□□ -1.11
CHD2-220ENST00000630813 CHADLQ6NUI6 762 aa8.06□□□□□ -1.12
CHD2-220ENST00000630813 ZNF692Q9BU19 519 aaPredicted RBP8.04□□□□□ -1.12
CHD2-220ENST00000630813 POTEIP0CG38 1075 aa8.02□□□□□ -1.13
CHD2-220ENST00000630813 SSUH2Q9Y2M2 353 aa8.02□□□□□ -1.13
CHD2-220ENST00000630813 ATXN8OSP0DMR3 200 aa8.01□□□□□ -1.13
CHD2-220ENST00000630813 DCAF1Q9Y4B6 1507 aa7.99□□□□□ -1.13
CHD2-220ENST00000630813 PRR29P0C7W0 189 aa7.99□□□□□ -1.13
CHD2-220ENST00000630813 MKRN4PQ13434 485 aaPredicted RBP7.98□□□□□ -1.13
CHD2-220ENST00000630813 CD44P16070 742 aaKnown RBP7.97□□□□□ -1.13
CHD2-220ENST00000630813 ZBTB22O15209 634 aa7.96□□□□□ -1.14
CHD2-220ENST00000630813 DCAF8L2P0C7V8 631 aa7.95□□□□□ -1.14
CHD2-220ENST00000630813 DCBLD2Q96PD2 775 aa7.93□□□□□ -1.14
CHD2-220ENST00000630813 CLCN6P51797 869 aa7.92□□□□□ -1.14
CHD2-220ENST00000630813 PABPN1Q86U42 306 aaKnown RBP eCLIP7.91□□□□□ -1.14
CHD2-220ENST00000630813 FARP1Q9Y4F1 1045 aaPredicted RBP7.9□□□□□ -1.14
CHD2-220ENST00000630813 SUPT5HO00267 1087 aaKnown RBP7.83□□□□□ -1.16
CHD2-220ENST00000630813 OTUD5Q96G74 571 aa7.82□□□□□ -1.16
CHD2-220ENST00000630813 MYO15BQ96JP2 1530 aa7.82□□□□□ -1.16
CHD2-220ENST00000630813 POTEMA6NI47 508 aa7.81□□□□□ -1.16
CHD2-220ENST00000630813 ZNF579Q8NAF0 562 aaKnown RBP7.81□□□□□ -1.16
CHD2-220ENST00000630813 ABCC9O60706 1549 aa7.81□□□□□ -1.16
CHD2-220ENST00000630813 ZRANB1Q9UGI0 708 aa7.8□□□□□ -1.16
CHD2-220ENST00000630813 POTEGQ6S5H5 508 aa7.77□□□□□ -1.17
CHD2-220ENST00000630813 GALR2O43603 387 aaPredicted RBP7.76□□□□□ -1.17
CHD2-220ENST00000630813 POTEB2H3BUK9 544 aa7.75□□□□□ -1.17
CHD2-220ENST00000630813 SCRIBQ14160 1630 aa7.74□□□□□ -1.17
CHD2-220ENST00000630813 NACADO15069 1562 aa7.72□□□□□ -1.17
CHD2-220ENST00000630813 PCDH10Q9P2E7 1040 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms