RNA–Protein interactions for RNA: ENST00000626518.2

LINC01163-201, Transcript of long intergenic non-protein coding RNA 1163, humanhuman

TSL 4

Gene LINC01163, Length 533 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01163-201ENST00000626518 TOPBP1Q92547 1522 aa15.72■□□□□ 0.11
LINC01163-201ENST00000626518 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
LINC01163-201ENST00000626518 EIF4G3O43432 1585 aaKnown RBP15.7■□□□□ 0.1
LINC01163-201ENST00000626518 AQRO60306 1485 aaKnown RBP eCLIP15.7■□□□□ 0.1
LINC01163-201ENST00000626518 EFCAB3Q8N7B9 438 aa15.69■□□□□ 0.1
LINC01163-201ENST00000626518 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
LINC01163-201ENST00000626518 MKRN3Q13064 507 aaKnown RBP15.65■□□□□ 0.1
LINC01163-201ENST00000626518 CHD1O14646 1710 aa15.65■□□□□ 0.1
LINC01163-201ENST00000626518 BBXQ8WY36 941 aaPredicted RBP15.63■□□□□ 0.09
LINC01163-201ENST00000626518 NKX1-1Q15270 411 aaPredicted RBP15.62■□□□□ 0.09
LINC01163-201ENST00000626518 ABCC8Q09428 1581 aa15.61■□□□□ 0.09
LINC01163-201ENST00000626518 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
LINC01163-201ENST00000626518 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
LINC01163-201ENST00000626518 SLC39A7Q92504 469 aa15.58■□□□□ 0.08
LINC01163-201ENST00000626518 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.08
LINC01163-201ENST00000626518 IER5LQ5T953 404 aa15.57■□□□□ 0.08
LINC01163-201ENST00000626518 DNMBPQ6XZF7 1577 aa15.57■□□□□ 0.08
LINC01163-201ENST00000626518 SOX12O15370 315 aa15.56■□□□□ 0.08
LINC01163-201ENST00000626518 MFRPQ9BY79 579 aa15.56■□□□□ 0.08
LINC01163-201ENST00000626518 PHF8Q9UPP1 1060 aa15.56■□□□□ 0.08
LINC01163-201ENST00000626518 CLASP1Q7Z460 1538 aa15.56■□□□□ 0.08
LINC01163-201ENST00000626518 METRNQ9UJH8 293 aa15.55■□□□□ 0.08
LINC01163-201ENST00000626518 C7P10643 843 aa15.54■□□□□ 0.08
LINC01163-201ENST00000626518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.54■□□□□ 0.08
LINC01163-201ENST00000626518 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.54■□□□□ 0.08
LINC01163-201ENST00000626518 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
LINC01163-201ENST00000626518 TDRD9Q8NDG6 1382 aaKnown RBP15.52■□□□□ 0.08
LINC01163-201ENST00000626518 IRX5P78411 483 aaPredicted RBP15.52■□□□□ 0.08
LINC01163-201ENST00000626518 SEC24BO95487 1268 aa15.5■□□□□ 0.07
LINC01163-201ENST00000626518 NLRP6P59044 892 aa15.5■□□□□ 0.07
LINC01163-201ENST00000626518 COLQQ9Y215 455 aaPredicted RBP15.5■□□□□ 0.07
LINC01163-201ENST00000626518 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
LINC01163-201ENST00000626518 FBXO22Q8NEZ5 403 aa15.49■□□□□ 0.07
LINC01163-201ENST00000626518 ILDR1Q86SU0 546 aaPredicted RBP15.48■□□□□ 0.07
LINC01163-201ENST00000626518 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
LINC01163-201ENST00000626518 OCEL1Q9H607 264 aa15.48■□□□□ 0.07
LINC01163-201ENST00000626518 SNAPC4Q5SXM2 1469 aa15.47■□□□□ 0.07
LINC01163-201ENST00000626518 POTEFA5A3E0 1075 aa15.47■□□□□ 0.07
LINC01163-201ENST00000626518 PLCG2P16885 1265 aa15.47■□□□□ 0.07
LINC01163-201ENST00000626518 SOGA1O94964 1423 aa15.46■□□□□ 0.07
LINC01163-201ENST00000626518 GTPBP6O43824 516 aaPredicted RBP15.46■□□□□ 0.07
LINC01163-201ENST00000626518 MS4A4AQ96JQ5 239 aa15.46■□□□□ 0.07
LINC01163-201ENST00000626518 PAXIP1Q6ZW49 1069 aaPredicted RBP15.45■□□□□ 0.06
LINC01163-201ENST00000626518 PDCD7Q8N8D1 485 aaKnown RBP15.45■□□□□ 0.06
LINC01163-201ENST00000626518 CFAP44Q96MT7 982 aa15.44■□□□□ 0.06
LINC01163-201ENST00000626518 GAPVD1Q14C86 1478 aa15.44■□□□□ 0.06
LINC01163-201ENST00000626518 SPRYD3Q8NCJ5 442 aa15.43■□□□□ 0.06
LINC01163-201ENST00000626518 SYNJ1O43426 1573 aa15.43■□□□□ 0.06
LINC01163-201ENST00000626518 DPY19L2Q6NUT2 758 aa15.42■□□□□ 0.06
LINC01163-201ENST00000626518 RYDENQ9NUL5 291 aaKnown RBP15.41■□□□□ 0.06
LINC01163-201ENST00000626518 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
LINC01163-201ENST00000626518 SYNJ2O15056 1496 aa15.38■□□□□ 0.05
LINC01163-201ENST00000626518 PPP1R37O75864 691 aa15.37■□□□□ 0.05
LINC01163-201ENST00000626518 GRIN2BQ13224 1484 aa15.36■□□□□ 0.05
LINC01163-201ENST00000626518 PLCB2Q00722 1185 aa15.35■□□□□ 0.05
LINC01163-201ENST00000626518 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
LINC01163-201ENST00000626518 FGD5Q6ZNL6 1462 aa15.33■□□□□ 0.05
LINC01163-201ENST00000626518 POTEB2H3BUK9 544 aa15.3■□□□□ 0.04
LINC01163-201ENST00000626518 ERCC6L2Q5T890 1561 aa15.3■□□□□ 0.04
LINC01163-201ENST00000626518 L3MBTL3Q96JM7 780 aaPredicted RBP15.26■□□□□ 0.03
LINC01163-201ENST00000626518 BOLA1Q9Y3E2 137 aa15.26■□□□□ 0.03
LINC01163-201ENST00000626518 KDM4FA0A1W2PPD8 638 aa15.25■□□□□ 0.03
LINC01163-201ENST00000626518 CUX1P39880 1505 aa15.25■□□□□ 0.03
LINC01163-201ENST00000626518 G3V3G9 751 aa15.24■□□□□ 0.03
LINC01163-201ENST00000626518 POTEJP0CG39 1038 aa15.23■□□□□ 0.03
LINC01163-201ENST00000626518 MICALL2Q8IY33 904 aa15.23■□□□□ 0.03
LINC01163-201ENST00000626518 TMEM121BQ9BXQ6 578 aaPredicted RBP15.19■□□□□ 0.02
LINC01163-201ENST00000626518 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
LINC01163-201ENST00000626518 NUP160Q12769 1436 aa15.17■□□□□ 0.02
LINC01163-201ENST00000626518 TSHZ2Q9NRE2 1034 aa15.17■□□□□ 0.02
LINC01163-201ENST00000626518 KIF13AQ9H1H9 1805 aa15.17■□□□□ 0.02
LINC01163-201ENST00000626518 GRIN2AQ12879 1464 aa15.16■□□□□ 0.02
LINC01163-201ENST00000626518 HAP1P54257 671 aaPredicted RBP15.16■□□□□ 0.02
LINC01163-201ENST00000626518 LHX8Q68G74 356 aa15.16■□□□□ 0.02
LINC01163-201ENST00000626518 PBRM1Q86U86 1689 aa15.15■□□□□ 0.02
LINC01163-201ENST00000626518 ABCA10Q8WWZ4 1543 aa15.14■□□□□ 0.01
LINC01163-201ENST00000626518 FAM69CQ0P6D2 419 aa15.13■□□□□ 0.01
LINC01163-201ENST00000626518 C3orf67Q6ZVT6 689 aa15.13■□□□□ 0.01
LINC01163-201ENST00000626518 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
LINC01163-201ENST00000626518 SHROOM2Q13796 1616 aa15.11■□□□□ 0.01
LINC01163-201ENST00000626518 CADPS2Q86UW7 1296 aa15.11■□□□□ 0.01
LINC01163-201ENST00000626518 ABCC10Q5T3U5 1492 aa15.11■□□□□ 0.01
LINC01163-201ENST00000626518 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.08■□□□□ 0
LINC01163-201ENST00000626518 MAMSTRQ6ZN01 415 aa15.07■□□□□ 0
LINC01163-201ENST00000626518 SCUBE2Q9NQ36 999 aa15.07■□□□□ 0
LINC01163-201ENST00000626518 PRG4Q92954 1404 aaPredicted RBP15.06■□□□□ 0
LINC01163-201ENST00000626518 ADAMTS12P58397 1594 aa15.05■□□□□ -0
LINC01163-201ENST00000626518 TMEM92Q6UXU6 159 aa15.04■□□□□ -0
LINC01163-201ENST00000626518 FHAD1B1AJZ9 1412 aa15.03■□□□□ -0
LINC01163-201ENST00000626518 OTUD5Q96G74 571 aa15.03■□□□□ -0
LINC01163-201ENST00000626518 JPH4Q96JJ6 628 aa15.03■□□□□ -0
LINC01163-201ENST00000626518 MAPKBP1O60336 1514 aa15.02□□□□□ -0.01
LINC01163-201ENST00000626518 DIP2BQ9P265 1576 aa15.01□□□□□ -0.01
LINC01163-201ENST00000626518 NCKAP5LQ9HCH0 1330 aa15□□□□□ -0.01
LINC01163-201ENST00000626518 KDM6BO15054 1643 aa14.99□□□□□ -0.01
LINC01163-201ENST00000626518 C2orf72A6NCS6 295 aa14.98□□□□□ -0.01
LINC01163-201ENST00000626518 SLAIN1Q8ND83 568 aa14.98□□□□□ -0.01
LINC01163-201ENST00000626518 TMC2Q8TDI7 906 aa14.98□□□□□ -0.01
LINC01163-201ENST00000626518 CRISPLD2Q9H0B8 497 aa14.98□□□□□ -0.01
LINC01163-201ENST00000626518 WRNQ14191 1432 aaPredicted RBP eCLIP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms