RNA–Protein interactions for RNA: ENST00000626518.2

LINC01163-201, Transcript of long intergenic non-protein coding RNA 1163, humanhuman

TSL 4

Gene LINC01163, Length 533 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01163-201ENST00000626518 AEBP2Q6ZN18 517 aaPredicted RBP32.06■■■□□ 2.72
LINC01163-201ENST00000626518 CHIC1Q5VXU3 224 aa31.28■■■□□ 2.6
LINC01163-201ENST00000626518 PHF23Q9BUL5 403 aaPredicted RBP27.55■■■□□ 2
LINC01163-201ENST00000626518 SENP3Q9H4L4 574 aaPredicted RBP27.15■■□□□ 1.94
LINC01163-201ENST00000626518 PLPPR3Q6T4P5 718 aa25.4■■□□□ 1.66
LINC01163-201ENST00000626518 FOXD1Q16676 465 aa25.23■■□□□ 1.63
LINC01163-201ENST00000626518 PPP6R1Q9UPN7 881 aa24.32■■□□□ 1.48
LINC01163-201ENST00000626518 ADRA2BP18089 450 aa24.3■■□□□ 1.48
LINC01163-201ENST00000626518 PIAS4Q8N2W9 510 aaPredicted RBP23.81■■□□□ 1.4
LINC01163-201ENST00000626518 MSH5O43196 834 aa23.22■■□□□ 1.31
LINC01163-201ENST00000626518 PPP4R3CPQ6ZMV5 832 aa22.4■■□□□ 1.18
LINC01163-201ENST00000626518 SCAF1Q9H7N4 1312 aaKnown RBP22.15■■□□□ 1.14
LINC01163-201ENST00000626518 MAPK8IP2Q13387 824 aaPredicted RBP22.05■■□□□ 1.12
LINC01163-201ENST00000626518 KCNA4P22459 653 aa21.93■■□□□ 1.1
LINC01163-201ENST00000626518 NCBP3Q53F19 620 aaKnown RBP21.79■■□□□ 1.08
LINC01163-201ENST00000626518 CNKSR2Q8WXI2 1034 aa21.75■■□□□ 1.07
LINC01163-201ENST00000626518 DMRT2Q9Y5R5 561 aa21.68■■□□□ 1.06
LINC01163-201ENST00000626518 NPM3O75607 178 aaKnown RBP21.51■■□□□ 1.03
LINC01163-201ENST00000626518 RNF216Q9NWF9 866 aaPredicted RBP21.32■■□□□ 1
LINC01163-201ENST00000626518 HOXD11P31277 338 aaPredicted RBP21.23■□□□□ 0.99
LINC01163-201ENST00000626518 POTEDQ86YR6 584 aa21.16■□□□□ 0.98
LINC01163-201ENST00000626518 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
LINC01163-201ENST00000626518 SLC4A1APQ9BWU0 796 aaKnown RBP20.87■□□□□ 0.93
LINC01163-201ENST00000626518 DCAF8L1A6NGE4 600 aa20.8■□□□□ 0.92
LINC01163-201ENST00000626518 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
LINC01163-201ENST00000626518 EHMT2Q96KQ7 1210 aa20.33■□□□□ 0.85
LINC01163-201ENST00000626518 SLC4A2P04920 1241 aa20.31■□□□□ 0.84
LINC01163-201ENST00000626518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.26■□□□□ 0.83
LINC01163-201ENST00000626518 ZBTB22O15209 634 aa20.18■□□□□ 0.82
LINC01163-201ENST00000626518 FOXD4L1Q9NU39 408 aa20.14■□□□□ 0.81
LINC01163-201ENST00000626518 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
LINC01163-201ENST00000626518 U3KPZ7 1027 aaPredicted RBP19.94■□□□□ 0.78
LINC01163-201ENST00000626518 RNF39Q9H2S5 420 aa19.92■□□□□ 0.78
LINC01163-201ENST00000626518 MYCNP04198 464 aaPredicted RBP19.85■□□□□ 0.77
LINC01163-201ENST00000626518 C1QBPQ07021 282 aaKnown RBP19.66■□□□□ 0.74
LINC01163-201ENST00000626518 ABCC9O60706 1549 aa19.66■□□□□ 0.74
LINC01163-201ENST00000626518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
LINC01163-201ENST00000626518 HNRNPUL2Q1KMD3 747 aaKnown RBP19.63■□□□□ 0.73
LINC01163-201ENST00000626518 SAMD1Q6SPF0 538 aaPredicted RBP19.58■□□□□ 0.72
LINC01163-201ENST00000626518 APLP2Q06481 763 aa19.42■□□□□ 0.7
LINC01163-201ENST00000626518 CACNB1Q02641 598 aaPredicted RBP19.41■□□□□ 0.7
LINC01163-201ENST00000626518 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
LINC01163-201ENST00000626518 ATXN8OSP0DMR3 200 aa19.4■□□□□ 0.7
LINC01163-201ENST00000626518 ATF5Q9Y2D1 282 aaPredicted RBP19.37■□□□□ 0.69
LINC01163-201ENST00000626518 CAPN15O75808 1086 aa19.32■□□□□ 0.68
LINC01163-201ENST00000626518 TRHP20396 242 aaPredicted RBP19.24■□□□□ 0.67
LINC01163-201ENST00000626518 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
LINC01163-201ENST00000626518 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
LINC01163-201ENST00000626518 ABCB7O75027 752 aa18.97■□□□□ 0.63
LINC01163-201ENST00000626518 DSG3P32926 999 aa18.97■□□□□ 0.63
LINC01163-201ENST00000626518 POLA2Q14181 598 aa18.92■□□□□ 0.62
LINC01163-201ENST00000626518 ZBTB12Q9Y330 459 aaPredicted RBP18.54■□□□□ 0.56
LINC01163-201ENST00000626518 MKRN4PQ13434 485 aaPredicted RBP18.52■□□□□ 0.56
LINC01163-201ENST00000626518 FBLN2P98095 1184 aa18.51■□□□□ 0.55
LINC01163-201ENST00000626518 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
LINC01163-201ENST00000626518 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
LINC01163-201ENST00000626518 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
LINC01163-201ENST00000626518 NACADO15069 1562 aa18.16■□□□□ 0.5
LINC01163-201ENST00000626518 FKBP8Q14318 412 aa18.15■□□□□ 0.5
LINC01163-201ENST00000626518 SPDYE4A6NLX3 237 aa18.1■□□□□ 0.49
LINC01163-201ENST00000626518 SPDYE2BA6NHP3 402 aa18.06■□□□□ 0.48
LINC01163-201ENST00000626518 SPDYE6P0CI01 402 aa18.06■□□□□ 0.48
LINC01163-201ENST00000626518 SPDYE2Q495Y8 402 aa18.06■□□□□ 0.48
LINC01163-201ENST00000626518 RBM42Q9BTD8 480 aaKnown RBP18.04■□□□□ 0.48
LINC01163-201ENST00000626518 ZNF692Q9BU19 519 aaPredicted RBP18.03■□□□□ 0.48
LINC01163-201ENST00000626518 DCAF8L2P0C7V8 631 aa17.99■□□□□ 0.47
LINC01163-201ENST00000626518 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
LINC01163-201ENST00000626518 SSUH2Q9Y2M2 353 aa17.93■□□□□ 0.46
LINC01163-201ENST00000626518 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
LINC01163-201ENST00000626518 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
LINC01163-201ENST00000626518 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
LINC01163-201ENST00000626518 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.43
LINC01163-201ENST00000626518 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
LINC01163-201ENST00000626518 PROM2Q8N271 834 aa17.76■□□□□ 0.43
LINC01163-201ENST00000626518 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
LINC01163-201ENST00000626518 REM2Q8IYK8 340 aaPredicted RBP17.69■□□□□ 0.42
LINC01163-201ENST00000626518 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
LINC01163-201ENST00000626518 SPDYE1Q8NFV5 336 aaPredicted RBP17.54■□□□□ 0.4
LINC01163-201ENST00000626518 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
LINC01163-201ENST00000626518 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
LINC01163-201ENST00000626518 CLEC11AQ9Y240 323 aa17.5■□□□□ 0.39
LINC01163-201ENST00000626518 STAG3Q9UJ98 1225 aa17.45■□□□□ 0.38
LINC01163-201ENST00000626518 FBXO3Q9UK99 471 aa17.44■□□□□ 0.38
LINC01163-201ENST00000626518 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
LINC01163-201ENST00000626518 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
LINC01163-201ENST00000626518 CHRDL2Q6WN34 429 aa17.32■□□□□ 0.36
LINC01163-201ENST00000626518 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
LINC01163-201ENST00000626518 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
LINC01163-201ENST00000626518 VASPP50552 380 aaPredicted RBP17.23■□□□□ 0.35
LINC01163-201ENST00000626518 MIER1Q8N108 512 aa17.17■□□□□ 0.34
LINC01163-201ENST00000626518 CUX2O14529 1486 aa17.15■□□□□ 0.34
LINC01163-201ENST00000626518 FXR2P51116 673 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC01163-201ENST00000626518 PLCD3Q8N3E9 789 aa17.14■□□□□ 0.33
LINC01163-201ENST00000626518 PIP4P2Q8N4L2 257 aa17.11■□□□□ 0.33
LINC01163-201ENST00000626518 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
LINC01163-201ENST00000626518 CHADLQ6NUI6 762 aa17.09■□□□□ 0.33
LINC01163-201ENST00000626518 PRKAR2AP13861 404 aaKnown RBP17.06■□□□□ 0.32
LINC01163-201ENST00000626518 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
LINC01163-201ENST00000626518 IFNLR1Q8IU57 520 aaPredicted RBP17.02■□□□□ 0.32
LINC01163-201ENST00000626518 KLHL34Q8N239 644 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms