RNA–Protein interactions for RNA: ENST00000622445.4

CACNB1-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 5 BASIC

Gene CACNB1, Length 3,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-212ENST00000622445 EXOC6Q8TAG9 804 aa17.18■□□□□ 0.34
CACNB1-212ENST00000622445 MYT1LQ9UL68 1186 aa17.18■□□□□ 0.34
CACNB1-212ENST00000622445 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
CACNB1-212ENST00000622445 SLC4A3P48751 1232 aa17.16■□□□□ 0.34
CACNB1-212ENST00000622445 ZBED9Q6R2W3 1325 aa17.16■□□□□ 0.34
CACNB1-212ENST00000622445 CNTLNQ9NXG0 1405 aa17.16■□□□□ 0.34
CACNB1-212ENST00000622445 FYCO1Q9BQS8 1478 aa17.15■□□□□ 0.34
CACNB1-212ENST00000622445 CDK13Q14004 1512 aaKnown RBP17.14■□□□□ 0.33
CACNB1-212ENST00000622445 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
CACNB1-212ENST00000622445 CDCA7LQ96GN5 454 aa17.13■□□□□ 0.33
CACNB1-212ENST00000622445 HMGXB3Q12766 1538 aa17.13■□□□□ 0.33
CACNB1-212ENST00000622445 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
CACNB1-212ENST00000622445 CHMP7Q8WUX9 453 aaPredicted RBP17.11■□□□□ 0.33
CACNB1-212ENST00000622445 HNRNPMP52272 730 aaKnown RBP eCLIP17.1■□□□□ 0.33
CACNB1-212ENST00000622445 ARXQ96QS3 562 aa17.1■□□□□ 0.33
CACNB1-212ENST00000622445 USP47Q96K76 1375 aa17.09■□□□□ 0.33
CACNB1-212ENST00000622445 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
CACNB1-212ENST00000622445 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
CACNB1-212ENST00000622445 PTPN23Q9H3S7 1636 aa17.09■□□□□ 0.33
CACNB1-212ENST00000622445 NEFMP07197 916 aa17.07■□□□□ 0.32
CACNB1-212ENST00000622445 TSPY4P0CV99 314 aa17.07■□□□□ 0.32
CACNB1-212ENST00000622445 TSPY10P0CW01 314 aa17.07■□□□□ 0.32
CACNB1-212ENST00000622445 NUP155O75694 1391 aa17.06■□□□□ 0.32
CACNB1-212ENST00000622445 RGS3P49796 1198 aa17.06■□□□□ 0.32
CACNB1-212ENST00000622445 RCAN3Q9UKA8 241 aa17.04■□□□□ 0.32
CACNB1-212ENST00000622445 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
CACNB1-212ENST00000622445 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
CACNB1-212ENST00000622445 MAP3K1Q13233 1512 aa17.02■□□□□ 0.32
CACNB1-212ENST00000622445 KDM6BO15054 1643 aa17.02■□□□□ 0.32
CACNB1-212ENST00000622445 NBPF1Q3BBV0 1214 aa17.02■□□□□ 0.31
CACNB1-212ENST00000622445 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
CACNB1-212ENST00000622445 IL27Q8NEV9 243 aa17■□□□□ 0.31
CACNB1-212ENST00000622445 PNISRQ8TF01 805 aaKnown RBP17■□□□□ 0.31
CACNB1-212ENST00000622445 PLEKHD1A6NEE1 506 aa16.99■□□□□ 0.31
CACNB1-212ENST00000622445 NEUROD2Q15784 382 aa16.99■□□□□ 0.31
CACNB1-212ENST00000622445 TNNT2P45379 298 aaPredicted RBP16.98■□□□□ 0.31
CACNB1-212ENST00000622445 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
CACNB1-212ENST00000622445 ANKRD30BQ9BXX2 1392 aa16.98■□□□□ 0.31
CACNB1-212ENST00000622445 PRG4Q92954 1404 aaPredicted RBP16.98■□□□□ 0.31
CACNB1-212ENST00000622445 MAGI3Q5TCQ9 1506 aa16.97■□□□□ 0.31
CACNB1-212ENST00000622445 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
CACNB1-212ENST00000622445 CCDC146Q8IYE0 955 aa16.97■□□□□ 0.31
CACNB1-212ENST00000622445 NCOA1Q15788 1441 aa16.97■□□□□ 0.31
CACNB1-212ENST00000622445 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.31
CACNB1-212ENST00000622445 PDE4AP27815 886 aa16.96■□□□□ 0.31
CACNB1-212ENST00000622445 CRBNQ96SW2 442 aa16.95■□□□□ 0.3
CACNB1-212ENST00000622445 ROCK2O75116 1388 aaKnown RBP16.95■□□□□ 0.3
CACNB1-212ENST00000622445 URB2Q14146 1524 aaKnown RBP16.95■□□□□ 0.3
CACNB1-212ENST00000622445 ERICH6BQ5W0A0 696 aa16.94■□□□□ 0.3
CACNB1-212ENST00000622445 CFAP43Q8NDM7 1665 aa16.94■□□□□ 0.3
CACNB1-212ENST00000622445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.94■□□□□ 0.3
CACNB1-212ENST00000622445 C20orf194Q5TEA3 1177 aa16.93■□□□□ 0.3
CACNB1-212ENST00000622445 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
CACNB1-212ENST00000622445 EIF5BO60841 1220 aaKnown RBP16.92■□□□□ 0.3
CACNB1-212ENST00000622445 PANK3Q9H999 370 aa16.92■□□□□ 0.3
CACNB1-212ENST00000622445 ANO8Q9HCE9 1232 aaPredicted RBP16.92■□□□□ 0.3
CACNB1-212ENST00000622445 EFCAB5A4FU69 1503 aa16.92■□□□□ 0.3
CACNB1-212ENST00000622445 EPRSP07814 1512 aaKnown RBP16.91■□□□□ 0.3
CACNB1-212ENST00000622445 PRKCSHP14314 528 aaPredicted RBP16.91■□□□□ 0.3
CACNB1-212ENST00000622445 DENND4BO75064 1496 aaPredicted RBP16.9■□□□□ 0.3
CACNB1-212ENST00000622445 THOC2Q8NI27 1593 aaKnown RBP16.9■□□□□ 0.3
CACNB1-212ENST00000622445 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
CACNB1-212ENST00000622445 CANXP27824 592 aaKnown RBP16.9■□□□□ 0.3
CACNB1-212ENST00000622445 SUPT6HQ7KZ85 1726 aaKnown RBP16.89■□□□□ 0.3
CACNB1-212ENST00000622445 ABCC5O15440 1437 aa16.89■□□□□ 0.29
CACNB1-212ENST00000622445 CHGAP10645 457 aaKnown RBP16.89■□□□□ 0.29
CACNB1-212ENST00000622445 WDR43Q15061 677 aaKnown RBP eCLIP16.89■□□□□ 0.29
CACNB1-212ENST00000622445 GRIN2BQ13224 1484 aa16.89■□□□□ 0.29
CACNB1-212ENST00000622445 DAPK1P53355 1430 aa16.89■□□□□ 0.29
CACNB1-212ENST00000622445 EHBP1L1Q8N3D4 1523 aa16.86■□□□□ 0.29
CACNB1-212ENST00000622445 MYBBP1AQ9BQG0 1328 aaKnown RBP16.86■□□□□ 0.29
CACNB1-212ENST00000622445 SPRYD3Q8NCJ5 442 aa16.85■□□□□ 0.29
CACNB1-212ENST00000622445 KDM5BQ9UGL1 1544 aa16.84■□□□□ 0.29
CACNB1-212ENST00000622445 NLRP13Q86W25 1043 aa16.84■□□□□ 0.29
CACNB1-212ENST00000622445 JPH4Q96JJ6 628 aa16.84■□□□□ 0.29
CACNB1-212ENST00000622445 FRAT1Q92837 279 aaPredicted RBP16.83■□□□□ 0.29
CACNB1-212ENST00000622445 KTN1Q86UP2 1357 aaKnown RBP16.83■□□□□ 0.28
CACNB1-212ENST00000622445 ADAMTS8Q9UP79 889 aa16.83■□□□□ 0.28
CACNB1-212ENST00000622445 RPRD2Q5VT52 1461 aaKnown RBP16.83■□□□□ 0.28
CACNB1-212ENST00000622445 SMG6Q86US8 1419 aaKnown RBP16.83■□□□□ 0.28
CACNB1-212ENST00000622445 DHX29Q7Z478 1369 aaKnown RBP16.82■□□□□ 0.28
CACNB1-212ENST00000622445 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
CACNB1-212ENST00000622445 UGGT2Q9NYU1 1516 aa16.82■□□□□ 0.28
CACNB1-212ENST00000622445 KNSTRNQ9Y448 316 aa16.82■□□□□ 0.28
CACNB1-212ENST00000622445 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
CACNB1-212ENST00000622445 ANKRD50Q9ULJ7 1429 aa16.8■□□□□ 0.28
CACNB1-212ENST00000622445 BRPF3Q9ULD4 1205 aa16.8■□□□□ 0.28
CACNB1-212ENST00000622445 RRP7AQ9Y3A4 280 aaKnown RBP16.8■□□□□ 0.28
CACNB1-212ENST00000622445 PLB1Q6P1J6 1458 aa16.79■□□□□ 0.28
CACNB1-212ENST00000622445 RALBP1Q15311 655 aa16.79■□□□□ 0.28
CACNB1-212ENST00000622445 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
CACNB1-212ENST00000622445 BCL2L13Q9BXK5 485 aa16.79■□□□□ 0.28
CACNB1-212ENST00000622445 TCERG1O14776 1098 aaKnown RBP16.78■□□□□ 0.28
CACNB1-212ENST00000622445 SLKQ9H2G2 1235 aaPredicted RBP16.77■□□□□ 0.27
CACNB1-212ENST00000622445 CLUAP1Q96AJ1 413 aa16.75■□□□□ 0.27
CACNB1-212ENST00000622445 BACH2Q9BYV9 841 aa16.74■□□□□ 0.27
CACNB1-212ENST00000622445 KIAA1107Q9UPP5 1409 aa16.74■□□□□ 0.27
CACNB1-212ENST00000622445 CTTNBP2Q8WZ74 1663 aa16.74■□□□□ 0.27
CACNB1-212ENST00000622445 TMF1P82094 1093 aa16.73■□□□□ 0.27
CACNB1-212ENST00000622445 NUTM2DQ5VT03 806 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms