RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 IPO9Q96P70 1041 aaKnown RBP11.77□□□□□ -0.53
C9orf72-206ENST00000619707 MPHOSPH9Q99550 1183 aa11.77□□□□□ -0.53
C9orf72-206ENST00000619707 THOC2Q8NI27 1593 aaKnown RBP11.77□□□□□ -0.53
C9orf72-206ENST00000619707 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
C9orf72-206ENST00000619707 UGGT2Q9NYU1 1516 aa11.76□□□□□ -0.53
C9orf72-206ENST00000619707 FANCD2Q9BXW9 1451 aa11.76□□□□□ -0.53
C9orf72-206ENST00000619707 AKNAQ7Z591 1439 aa11.76□□□□□ -0.53
C9orf72-206ENST00000619707 ANO8Q9HCE9 1232 aaPredicted RBP11.76□□□□□ -0.53
C9orf72-206ENST00000619707 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
C9orf72-206ENST00000619707 DNMBPQ6XZF7 1577 aa11.75□□□□□ -0.53
C9orf72-206ENST00000619707 NUDCQ9Y266 331 aa11.75□□□□□ -0.53
C9orf72-206ENST00000619707 KIF7Q2M1P5 1343 aa11.75□□□□□ -0.53
C9orf72-206ENST00000619707 SAMD9Q5K651 1589 aa11.75□□□□□ -0.53
C9orf72-206ENST00000619707 POLA1P09884 1462 aaPredicted RBP11.74□□□□□ -0.53
C9orf72-206ENST00000619707 TCOF1Q13428 1488 aaKnown RBP11.74□□□□□ -0.53
C9orf72-206ENST00000619707 FOXD1Q16676 465 aa11.73□□□□□ -0.53
C9orf72-206ENST00000619707 KDM6BO15054 1643 aa11.73□□□□□ -0.53
C9orf72-206ENST00000619707 ARHGEF11O15085 1522 aa11.72□□□□□ -0.53
C9orf72-206ENST00000619707 ABCA5Q8WWZ7 1642 aa11.72□□□□□ -0.53
C9orf72-206ENST00000619707 NBPF8Q3BBV2 869 aa11.72□□□□□ -0.53
C9orf72-206ENST00000619707 POLR1AO95602 1720 aaPredicted RBP11.72□□□□□ -0.53
C9orf72-206ENST00000619707 RNF123Q5XPI4 1314 aa11.72□□□□□ -0.53
C9orf72-206ENST00000619707 TOPBP1Q92547 1522 aa11.71□□□□□ -0.53
C9orf72-206ENST00000619707 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
C9orf72-206ENST00000619707 SPATA31E1Q6ZUB1 1445 aa11.7□□□□□ -0.54
C9orf72-206ENST00000619707 CNGB1Q14028 1251 aaPredicted RBP11.7□□□□□ -0.54
C9orf72-206ENST00000619707 MAGI3Q5TCQ9 1506 aa11.7□□□□□ -0.54
C9orf72-206ENST00000619707 ANKRD30BQ9BXX2 1392 aa11.69□□□□□ -0.54
C9orf72-206ENST00000619707 TEX14Q8IWB6 1497 aa11.69□□□□□ -0.54
C9orf72-206ENST00000619707 TULP1O00294 542 aaPredicted RBP11.68□□□□□ -0.54
C9orf72-206ENST00000619707 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
C9orf72-206ENST00000619707 POLR3GLQ9BT43 218 aa11.67□□□□□ -0.54
C9orf72-206ENST00000619707 MIA2Q96PC5 1412 aa11.67□□□□□ -0.54
C9orf72-206ENST00000619707 DHX29Q7Z478 1369 aaKnown RBP11.66□□□□□ -0.54
C9orf72-206ENST00000619707 UBE2Q2Q8WVN8 375 aa11.65□□□□□ -0.55
C9orf72-206ENST00000619707 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.55
C9orf72-206ENST00000619707 NPM2Q86SE8 214 aaKnown RBP11.64□□□□□ -0.55
C9orf72-206ENST00000619707 TMC1Q8TDI8 760 aa11.63□□□□□ -0.55
C9orf72-206ENST00000619707 SENP3-EIF4A1A0A087X0R7 540 aa11.63□□□□□ -0.55
C9orf72-206ENST00000619707 ARXQ96QS3 562 aa11.63□□□□□ -0.55
C9orf72-206ENST00000619707 ROCK1Q13464 1354 aa11.62□□□□□ -0.55
C9orf72-206ENST00000619707 TDRD9Q8NDG6 1382 aaKnown RBP11.62□□□□□ -0.55
C9orf72-206ENST00000619707 PNISRQ8TF01 805 aaKnown RBP11.62□□□□□ -0.55
C9orf72-206ENST00000619707 USP47Q96K76 1375 aa11.62□□□□□ -0.55
C9orf72-206ENST00000619707 EPRSP07814 1512 aaKnown RBP11.62□□□□□ -0.55
C9orf72-206ENST00000619707 TCERG1O14776 1098 aaKnown RBP11.61□□□□□ -0.55
C9orf72-206ENST00000619707 GAPVD1Q14C86 1478 aa11.61□□□□□ -0.55
C9orf72-206ENST00000619707 NESP48681 1621 aa11.61□□□□□ -0.55
C9orf72-206ENST00000619707 DAPK1P53355 1430 aa11.61□□□□□ -0.55
C9orf72-206ENST00000619707 ARID4BQ4LE39 1312 aaPredicted RBP11.6□□□□□ -0.55
C9orf72-206ENST00000619707 ZNF326Q5BKZ1 582 aaKnown RBP11.6□□□□□ -0.55
C9orf72-206ENST00000619707 PKNOX2Q96KN3 472 aa11.6□□□□□ -0.55
C9orf72-206ENST00000619707 NEFMP07197 916 aa11.6□□□□□ -0.55
C9orf72-206ENST00000619707 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
C9orf72-206ENST00000619707 RRP1P56182 461 aaKnown RBP11.59□□□□□ -0.55
C9orf72-206ENST00000619707 CDK13Q14004 1512 aaKnown RBP11.59□□□□□ -0.55
C9orf72-206ENST00000619707 IL27Q8NEV9 243 aa11.59□□□□□ -0.55
C9orf72-206ENST00000619707 LAS1LQ9Y4W2 734 aaKnown RBP11.59□□□□□ -0.55
C9orf72-206ENST00000619707 BCORL1Q5H9F3 1711 aa11.59□□□□□ -0.55
C9orf72-206ENST00000619707 ROCK2O75116 1388 aaKnown RBP11.58□□□□□ -0.55
C9orf72-206ENST00000619707 ARID3CA6NKF2 412 aa11.58□□□□□ -0.56
C9orf72-206ENST00000619707 PDE4AP27815 886 aa11.58□□□□□ -0.56
C9orf72-206ENST00000619707 EXOC6Q8TAG9 804 aa11.58□□□□□ -0.56
C9orf72-206ENST00000619707 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
C9orf72-206ENST00000619707 ABCC5O15440 1437 aa11.57□□□□□ -0.56
C9orf72-206ENST00000619707 DNMT1P26358 1616 aaKnown RBP11.57□□□□□ -0.56
C9orf72-206ENST00000619707 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
C9orf72-206ENST00000619707 SALL2Q9Y467 1007 aaPredicted RBP11.57□□□□□ -0.56
C9orf72-206ENST00000619707 MBD5Q9P267 1494 aa11.56□□□□□ -0.56
C9orf72-206ENST00000619707 KIF15Q9NS87 1388 aa11.56□□□□□ -0.56
C9orf72-206ENST00000619707 MS4A1P11836 297 aa11.56□□□□□ -0.56
C9orf72-206ENST00000619707 RCAN3Q9UKA8 241 aa11.56□□□□□ -0.56
C9orf72-206ENST00000619707 URB2Q14146 1524 aaKnown RBP11.55□□□□□ -0.56
C9orf72-206ENST00000619707 KIF14Q15058 1648 aa11.55□□□□□ -0.56
C9orf72-206ENST00000619707 LRPPRCP42704 1394 aaKnown RBP11.55□□□□□ -0.56
C9orf72-206ENST00000619707 BACH2Q9BYV9 841 aa11.55□□□□□ -0.56
C9orf72-206ENST00000619707 BRD4O60885 1362 aaPredicted RBP11.55□□□□□ -0.56
C9orf72-206ENST00000619707 KDM5CP41229 1560 aa11.54□□□□□ -0.56
C9orf72-206ENST00000619707 PZPP20742 1482 aa11.54□□□□□ -0.56
C9orf72-206ENST00000619707 MYBBP1AQ9BQG0 1328 aaKnown RBP11.54□□□□□ -0.56
C9orf72-206ENST00000619707 WDR62O43379 1518 aa11.54□□□□□ -0.56
C9orf72-206ENST00000619707 KTN1Q86UP2 1357 aaKnown RBP11.53□□□□□ -0.56
C9orf72-206ENST00000619707 ZNF644Q9H582 1327 aaPredicted RBP11.53□□□□□ -0.56
C9orf72-206ENST00000619707 RALBP1Q15311 655 aa11.53□□□□□ -0.56
C9orf72-206ENST00000619707 KIAA1107Q9UPP5 1409 aa11.52□□□□□ -0.56
C9orf72-206ENST00000619707 IQGAP2Q13576 1575 aa11.52□□□□□ -0.57
C9orf72-206ENST00000619707 PDIA4P13667 645 aaKnown RBP11.52□□□□□ -0.57
C9orf72-206ENST00000619707 DDRGK1Q96HY6 314 aa11.52□□□□□ -0.57
C9orf72-206ENST00000619707 CARD11Q9BXL7 1154 aa11.51□□□□□ -0.57
C9orf72-206ENST00000619707 PDE3BQ13370 1112 aa11.51□□□□□ -0.57
C9orf72-206ENST00000619707 WASHC2CQ9Y4E1 1318 aa11.51□□□□□ -0.57
C9orf72-206ENST00000619707 PKD2Q13563 968 aa11.5□□□□□ -0.57
C9orf72-206ENST00000619707 RALGAPBQ86X10 1494 aa11.5□□□□□ -0.57
C9orf72-206ENST00000619707 UHRF1BP1Q6BDS2 1440 aa11.48□□□□□ -0.57
C9orf72-206ENST00000619707 PDE4CQ08493 712 aa11.48□□□□□ -0.57
C9orf72-206ENST00000619707 NLRP13Q86W25 1043 aa11.47□□□□□ -0.57
C9orf72-206ENST00000619707 ST20-MTHFSA0A0A6YYL1 179 aa11.47□□□□□ -0.57
C9orf72-206ENST00000619707 ADGBQ8N7X0 1667 aa11.46□□□□□ -0.57
C9orf72-206ENST00000619707 GSE1Q14687 1217 aa11.45□□□□□ -0.58
C9orf72-206ENST00000619707 CFDP1Q9UEE9 299 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms