RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 SLAIN1Q8ND83 568 aa6.45□□□□□ -1.38
SEC22B-202ENST00000618538 CADPSQ9ULU8 1353 aa6.45□□□□□ -1.38
SEC22B-202ENST00000618538 MIER1Q8N108 512 aa6.44□□□□□ -1.38
SEC22B-202ENST00000618538 PLEKHG5O94827 1062 aa6.44□□□□□ -1.38
SEC22B-202ENST00000618538 TSPYL2Q9H2G4 693 aaPredicted RBP6.44□□□□□ -1.38
SEC22B-202ENST00000618538 GTF3C3Q9Y5Q9 886 aa6.44□□□□□ -1.38
SEC22B-202ENST00000618538 CC2D2AQ9P2K1 1620 aa6.43□□□□□ -1.38
SEC22B-202ENST00000618538 TIAM1Q13009 1591 aa6.42□□□□□ -1.38
SEC22B-202ENST00000618538 TTLL13PA6NNM8 815 aa6.42□□□□□ -1.38
SEC22B-202ENST00000618538 CARMIL1Q5VZK9 1371 aa6.41□□□□□ -1.38
SEC22B-202ENST00000618538 CCNB3Q8WWL7 1395 aa6.41□□□□□ -1.38
SEC22B-202ENST00000618538 PCF11O94913 1555 aaKnown RBP6.4□□□□□ -1.38
SEC22B-202ENST00000618538 COLQQ9Y215 455 aaPredicted RBP6.4□□□□□ -1.38
SEC22B-202ENST00000618538 MAPKBP1O60336 1514 aa6.4□□□□□ -1.38
SEC22B-202ENST00000618538 FANCD2Q9BXW9 1451 aa6.4□□□□□ -1.38
SEC22B-202ENST00000618538 RAD54L2Q9Y4B4 1467 aa6.4□□□□□ -1.38
SEC22B-202ENST00000618538 NESP48681 1621 aa6.4□□□□□ -1.39
SEC22B-202ENST00000618538 YTHDC1Q96MU7 727 aaKnown RBP6.4□□□□□ -1.39
SEC22B-202ENST00000618538 CENPBP07199 599 aaPredicted RBP6.39□□□□□ -1.39
SEC22B-202ENST00000618538 PHLDB1Q86UU1 1377 aa6.39□□□□□ -1.39
SEC22B-202ENST00000618538 MAP3K1Q13233 1512 aa6.39□□□□□ -1.39
SEC22B-202ENST00000618538 CFAP43Q8NDM7 1665 aa6.39□□□□□ -1.39
SEC22B-202ENST00000618538 CLSPNQ9HAW4 1339 aa6.39□□□□□ -1.39
SEC22B-202ENST00000618538 LRRC9Q6ZRR7 1453 aa6.38□□□□□ -1.39
SEC22B-202ENST00000618538 PLCG2P16885 1265 aa6.38□□□□□ -1.39
SEC22B-202ENST00000618538 POLA1P09884 1462 aaPredicted RBP6.38□□□□□ -1.39
SEC22B-202ENST00000618538 DNMBPQ6XZF7 1577 aa6.38□□□□□ -1.39
SEC22B-202ENST00000618538 MAP3K13O43283 966 aa6.38□□□□□ -1.39
SEC22B-202ENST00000618538 TOPBP1Q92547 1522 aa6.37□□□□□ -1.39
SEC22B-202ENST00000618538 ABCA10Q8WWZ4 1543 aa6.37□□□□□ -1.39
SEC22B-202ENST00000618538 RAB3GAP2Q9H2M9 1393 aa6.37□□□□□ -1.39
SEC22B-202ENST00000618538 FHOD3Q2V2M9 1422 aa6.36□□□□□ -1.39
SEC22B-202ENST00000618538 TRIM35Q9UPQ4 493 aa6.36□□□□□ -1.39
SEC22B-202ENST00000618538 WDR97A6NE52 1622 aa6.36□□□□□ -1.39
SEC22B-202ENST00000618538 ITGAEP38570 1179 aa6.35□□□□□ -1.39
SEC22B-202ENST00000618538 P3H3Q8IVL6 736 aa6.34□□□□□ -1.39
SEC22B-202ENST00000618538 URB2Q14146 1524 aaKnown RBP6.34□□□□□ -1.39
SEC22B-202ENST00000618538 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.34□□□□□ -1.39
SEC22B-202ENST00000618538 CTTNBP2Q8WZ74 1663 aa6.33□□□□□ -1.4
SEC22B-202ENST00000618538 LRRIQ1Q96JM4 1722 aa6.33□□□□□ -1.4
SEC22B-202ENST00000618538 TRPC6Q9Y210 931 aa6.33□□□□□ -1.4
SEC22B-202ENST00000618538 SNAPC4Q5SXM2 1469 aa6.33□□□□□ -1.4
SEC22B-202ENST00000618538 PROM2Q8N271 834 aa6.33□□□□□ -1.4
SEC22B-202ENST00000618538 FYCO1Q9BQS8 1478 aa6.33□□□□□ -1.4
SEC22B-202ENST00000618538 CUL7Q14999 1698 aa6.32□□□□□ -1.4
SEC22B-202ENST00000618538 FHAD1B1AJZ9 1412 aa6.32□□□□□ -1.4
SEC22B-202ENST00000618538 ABCA5Q8WWZ7 1642 aa6.32□□□□□ -1.4
SEC22B-202ENST00000618538 EFCAB5A4FU69 1503 aa6.32□□□□□ -1.4
SEC22B-202ENST00000618538 CASKIN1Q8WXD9 1431 aa6.32□□□□□ -1.4
SEC22B-202ENST00000618538 SETD5Q9C0A6 1442 aa6.32□□□□□ -1.4
SEC22B-202ENST00000618538 ZBTB47Q9UFB7 747 aaPredicted RBP6.31□□□□□ -1.4
SEC22B-202ENST00000618538 AQRO60306 1485 aaKnown RBP eCLIP6.31□□□□□ -1.4
SEC22B-202ENST00000618538 SAMD9Q5K651 1589 aa6.3□□□□□ -1.4
SEC22B-202ENST00000618538 PCDHB13Q9Y5F0 798 aa6.3□□□□□ -1.4
SEC22B-202ENST00000618538 IRX5P78411 483 aaPredicted RBP6.3□□□□□ -1.4
SEC22B-202ENST00000618538 SIN3AQ96ST3 1273 aa6.3□□□□□ -1.4
SEC22B-202ENST00000618538 OCEL1Q9H607 264 aa6.3□□□□□ -1.4
SEC22B-202ENST00000618538 PTPRKQ15262 1439 aa6.3□□□□□ -1.4
SEC22B-202ENST00000618538 TDRD9Q8NDG6 1382 aaKnown RBP6.29□□□□□ -1.4
SEC22B-202ENST00000618538 LAMC3Q9Y6N6 1575 aa6.29□□□□□ -1.4
SEC22B-202ENST00000618538 FAM50AQ14320 339 aaKnown RBP6.29□□□□□ -1.4
SEC22B-202ENST00000618538 KCNH8Q96L42 1107 aa6.29□□□□□ -1.4
SEC22B-202ENST00000618538 KIF21AQ7Z4S6 1674 aa6.28□□□□□ -1.4
SEC22B-202ENST00000618538 MAGI3Q5TCQ9 1506 aa6.28□□□□□ -1.4
SEC22B-202ENST00000618538 GRIN2BQ13224 1484 aa6.28□□□□□ -1.4
SEC22B-202ENST00000618538 FGD6Q6ZV73 1430 aa6.28□□□□□ -1.4
SEC22B-202ENST00000618538 TARBP1Q13395 1621 aaKnown RBP6.27□□□□□ -1.41
SEC22B-202ENST00000618538 ATP1B4Q9UN42 357 aaPredicted RBP6.27□□□□□ -1.41
SEC22B-202ENST00000618538 GAPVD1Q14C86 1478 aa6.27□□□□□ -1.41
SEC22B-202ENST00000618538 EMP3P54852 163 aa6.26□□□□□ -1.41
SEC22B-202ENST00000618538 RASEFQ8IZ41 740 aa6.26□□□□□ -1.41
SEC22B-202ENST00000618538 TMEM106CQ9BVX2 250 aa6.26□□□□□ -1.41
SEC22B-202ENST00000618538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.26□□□□□ -1.41
SEC22B-202ENST00000618538 FMN1Q68DA7 1419 aa6.26□□□□□ -1.41
SEC22B-202ENST00000618538 PTPN23Q9H3S7 1636 aa6.25□□□□□ -1.41
SEC22B-202ENST00000618538 KDM5BQ9UGL1 1544 aa6.25□□□□□ -1.41
SEC22B-202ENST00000618538 NCOA2Q15596 1464 aa6.25□□□□□ -1.41
SEC22B-202ENST00000618538 L3MBTL3Q96JM7 780 aaPredicted RBP6.25□□□□□ -1.41
SEC22B-202ENST00000618538 ARHGEF11O15085 1522 aa6.24□□□□□ -1.41
SEC22B-202ENST00000618538 CCDC18Q5T9S5 1454 aa6.24□□□□□ -1.41
SEC22B-202ENST00000618538 DENND4BO75064 1496 aaPredicted RBP6.24□□□□□ -1.41
SEC22B-202ENST00000618538 HFM1A2PYH4 1435 aa6.23□□□□□ -1.41
SEC22B-202ENST00000618538 UGGT2Q9NYU1 1516 aa6.23□□□□□ -1.41
SEC22B-202ENST00000618538 THOC2Q8NI27 1593 aaKnown RBP6.23□□□□□ -1.41
SEC22B-202ENST00000618538 NAIPQ13075 1403 aa6.23□□□□□ -1.41
SEC22B-202ENST00000618538 MYOM3Q5VTT5 1437 aa6.23□□□□□ -1.41
SEC22B-202ENST00000618538 PBRM1Q86U86 1689 aa6.22□□□□□ -1.41
SEC22B-202ENST00000618538 HIRIP3Q9BW71 556 aaPredicted RBP6.22□□□□□ -1.41
SEC22B-202ENST00000618538 MTUS2Q5JR59 1369 aa6.22□□□□□ -1.41
SEC22B-202ENST00000618538 EHBP1L1Q8N3D4 1523 aa6.22□□□□□ -1.41
SEC22B-202ENST00000618538 KDM6BO15054 1643 aa6.22□□□□□ -1.41
SEC22B-202ENST00000618538 PPP1R15AO75807 674 aaPredicted RBP6.22□□□□□ -1.41
SEC22B-202ENST00000618538 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
SEC22B-202ENST00000618538 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
SEC22B-202ENST00000618538 SUPT16HQ9Y5B9 1047 aaKnown RBP6.22□□□□□ -1.41
SEC22B-202ENST00000618538 PDS5BQ9NTI5 1447 aa6.21□□□□□ -1.41
SEC22B-202ENST00000618538 SUPT6HQ7KZ85 1726 aaKnown RBP6.21□□□□□ -1.41
SEC22B-202ENST00000618538 PTGER2P43116 358 aa6.21□□□□□ -1.42
SEC22B-202ENST00000618538 ADAMTS12P58397 1594 aa6.21□□□□□ -1.42
SEC22B-202ENST00000618538 UACAQ9BZF9 1416 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms