RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 AEBP2Q6ZN18 517 aaPredicted RBP13.82□□□□□ -0.2
SEC22B-202ENST00000618538 CHIC1Q5VXU3 224 aa13.17□□□□□ -0.3
SEC22B-202ENST00000618538 SENP3Q9H4L4 574 aaPredicted RBP12.1□□□□□ -0.47
SEC22B-202ENST00000618538 PHF23Q9BUL5 403 aaPredicted RBP11.75□□□□□ -0.53
SEC22B-202ENST00000618538 FOXD1Q16676 465 aa11.16□□□□□ -0.62
SEC22B-202ENST00000618538 POTEDQ86YR6 584 aa11.15□□□□□ -0.62
SEC22B-202ENST00000618538 MSH5O43196 834 aa10.84□□□□□ -0.67
SEC22B-202ENST00000618538 PIAS4Q8N2W9 510 aaPredicted RBP10.35□□□□□ -0.75
SEC22B-202ENST00000618538 PLPPR3Q6T4P5 718 aa10.13□□□□□ -0.79
SEC22B-202ENST00000618538 PPP6R1Q9UPN7 881 aa9.98□□□□□ -0.81
SEC22B-202ENST00000618538 ADRA2BP18089 450 aa9.95□□□□□ -0.82
SEC22B-202ENST00000618538 DMRT2Q9Y5R5 561 aa9.5□□□□□ -0.89
SEC22B-202ENST00000618538 CACNB1Q02641 598 aaPredicted RBP9.44□□□□□ -0.9
SEC22B-202ENST00000618538 SCAF1Q9H7N4 1312 aaKnown RBP9.42□□□□□ -0.9
SEC22B-202ENST00000618538 MAPK8IP2Q13387 824 aaPredicted RBP9.23□□□□□ -0.93
SEC22B-202ENST00000618538 RNF39Q9H2S5 420 aa9.09□□□□□ -0.95
SEC22B-202ENST00000618538 NISCHQ9Y2I1 1504 aa9.08□□□□□ -0.96
SEC22B-202ENST00000618538 C1QBPQ07021 282 aaKnown RBP9.04□□□□□ -0.96
SEC22B-202ENST00000618538 HOXD11P31277 338 aaPredicted RBP8.99□□□□□ -0.97
SEC22B-202ENST00000618538 DCAF8L1A6NGE4 600 aa8.97□□□□□ -0.97
SEC22B-202ENST00000618538 DNAJC5BQ9UF47 199 aa8.97□□□□□ -0.97
SEC22B-202ENST00000618538 RNF216Q9NWF9 866 aaPredicted RBP8.81□□□□□ -1
SEC22B-202ENST00000618538 CNKSR2Q8WXI2 1034 aa8.77□□□□□ -1.01
SEC22B-202ENST00000618538 PPP4R3CPQ6ZMV5 832 aa8.74□□□□□ -1.01
SEC22B-202ENST00000618538 POTEHQ6S545 545 aa8.68□□□□□ -1.02
SEC22B-202ENST00000618538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.5□□□□□ -1.057e-8■□□□□ 8.4
SEC22B-202ENST00000618538 NCBP3Q53F19 620 aaKnown RBP8.44□□□□□ -1.06
SEC22B-202ENST00000618538 DSG3P32926 999 aa8.33□□□□□ -1.08
SEC22B-202ENST00000618538 APLP2Q06481 763 aa8.27□□□□□ -1.08
SEC22B-202ENST00000618538 CAPN15O75808 1086 aa8.25□□□□□ -1.09
SEC22B-202ENST00000618538 U3KPZ7 1027 aaPredicted RBP8.22□□□□□ -1.09
SEC22B-202ENST00000618538 RBM42Q9BTD8 480 aaKnown RBP8.14□□□□□ -1.11
SEC22B-202ENST00000618538 SPINK5Q9NQ38 1064 aaPredicted RBP8.14□□□□□ -1.11
SEC22B-202ENST00000618538 ZNF219Q9P2Y4 722 aaPredicted RBP8.13□□□□□ -1.11
SEC22B-202ENST00000618538 NPM3O75607 178 aaKnown RBP8.1□□□□□ -1.11
SEC22B-202ENST00000618538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.07□□□□□ -1.12
SEC22B-202ENST00000618538 HNRNPUL2Q1KMD3 747 aaKnown RBP8.07□□□□□ -1.12
SEC22B-202ENST00000618538 CHRDL2Q6WN34 429 aa7.98□□□□□ -1.13
SEC22B-202ENST00000618538 TRHP20396 242 aaPredicted RBP7.97□□□□□ -1.13
SEC22B-202ENST00000618538 SP7Q8TDD2 431 aaPredicted RBP7.96□□□□□ -1.14
SEC22B-202ENST00000618538 SAMD1Q6SPF0 538 aaPredicted RBP7.94□□□□□ -1.14
SEC22B-202ENST00000618538 ABCB7O75027 752 aa7.92□□□□□ -1.14
SEC22B-202ENST00000618538 SLC4A2P04920 1241 aa7.82□□□□□ -1.16
SEC22B-202ENST00000618538 AKT1S1Q96B36 256 aa7.8□□□□□ -1.16
SEC22B-202ENST00000618538 ZBTB12Q9Y330 459 aaPredicted RBP7.75□□□□□ -1.17
SEC22B-202ENST00000618538 SHROOM4Q9ULL8 1493 aa7.74□□□□□ -1.17
SEC22B-202ENST00000618538 CCDC180Q9P1Z9 1646 aa7.72□□□□□ -1.17
SEC22B-202ENST00000618538 ZCCHC6Q5VYS8 1495 aaKnown RBP7.71□□□□□ -1.18
SEC22B-202ENST00000618538 POLA2Q14181 598 aa7.67□□□□□ -1.18
SEC22B-202ENST00000618538 PIP4P2Q8N4L2 257 aa7.67□□□□□ -1.18
SEC22B-202ENST00000618538 HAX1O00165 279 aa7.64□□□□□ -1.19
SEC22B-202ENST00000618538 MYCNP04198 464 aaPredicted RBP7.64□□□□□ -1.19
SEC22B-202ENST00000618538 REM2Q8IYK8 340 aaPredicted RBP7.62□□□□□ -1.19
SEC22B-202ENST00000618538 FXR2P51116 673 aaKnown RBP eCLIP7.62□□□□□ -1.19
SEC22B-202ENST00000618538 SUPT5HO00267 1087 aaKnown RBP7.55□□□□□ -1.2
SEC22B-202ENST00000618538 PITPNM1O00562 1244 aa7.51□□□□□ -1.21
SEC22B-202ENST00000618538 KCNA4P22459 653 aa7.47□□□□□ -1.21
SEC22B-202ENST00000618538 MYO15BQ96JP2 1530 aa7.45□□□□□ -1.22
SEC22B-202ENST00000618538 DCAF1Q9Y4B6 1507 aa7.45□□□□□ -1.22
SEC22B-202ENST00000618538 LHX8Q68G74 356 aa7.44□□□□□ -1.22
SEC22B-202ENST00000618538 DCAF8L2P0C7V8 631 aa7.43□□□□□ -1.22
SEC22B-202ENST00000618538 OSCARQ8IYS5 282 aa7.41□□□□□ -1.22
SEC22B-202ENST00000618538 C19orf67A6NJJ6 358 aa7.4□□□□□ -1.23
SEC22B-202ENST00000618538 CLCN6P51797 869 aa7.38□□□□□ -1.23
SEC22B-202ENST00000618538 SPDYE2BA6NHP3 402 aa7.37□□□□□ -1.23
SEC22B-202ENST00000618538 SPDYE6P0CI01 402 aa7.37□□□□□ -1.23
SEC22B-202ENST00000618538 SPDYE2Q495Y8 402 aa7.37□□□□□ -1.23
SEC22B-202ENST00000618538 EVX2Q03828 476 aa7.36□□□□□ -1.23
SEC22B-202ENST00000618538 SPDYE1Q8NFV5 336 aaPredicted RBP7.35□□□□□ -1.23
SEC22B-202ENST00000618538 GABBR2O75899 941 aa7.33□□□□□ -1.24
SEC22B-202ENST00000618538 PRKAR2AP13861 404 aaKnown RBP7.33□□□□□ -1.24
SEC22B-202ENST00000618538 PLSCR2Q9NRY7 297 aa7.29□□□□□ -1.24
SEC22B-202ENST00000618538 ABCC9O60706 1549 aa7.28□□□□□ -1.24
SEC22B-202ENST00000618538 FBLN2P98095 1184 aa7.27□□□□□ -1.25
SEC22B-202ENST00000618538 FOXD4L1Q9NU39 408 aa7.27□□□□□ -1.25
SEC22B-202ENST00000618538 SCRIBQ14160 1630 aa7.25□□□□□ -1.25
SEC22B-202ENST00000618538 ATF5Q9Y2D1 282 aaPredicted RBP7.24□□□□□ -1.25
SEC22B-202ENST00000618538 ATXN8OSP0DMR3 200 aa7.23□□□□□ -1.25
SEC22B-202ENST00000618538 RSF1Q96T23 1441 aaPredicted RBP7.2□□□□□ -1.26
SEC22B-202ENST00000618538 CLEC11AQ9Y240 323 aa7.19□□□□□ -1.26
SEC22B-202ENST00000618538 PCDH10Q9P2E7 1040 aa7.17□□□□□ -1.26
SEC22B-202ENST00000618538 LOC105371045A0A1W2PR82 267 aa7.17□□□□□ -1.26
SEC22B-202ENST00000618538 SSUH2Q9Y2M2 353 aa7.17□□□□□ -1.26
SEC22B-202ENST00000618538 RB1CC1Q8TDY2 1594 aa7.16□□□□□ -1.26
SEC22B-202ENST00000618538 HRCP23327 699 aa7.15□□□□□ -1.26
SEC22B-202ENST00000618538 PCGF6Q9BYE7 350 aa7.12□□□□□ -1.27
SEC22B-202ENST00000618538 CECR2Q9BXF3 1484 aa7.12□□□□□ -1.27
SEC22B-202ENST00000618538 ZNF692Q9BU19 519 aaPredicted RBP7.11□□□□□ -1.27
SEC22B-202ENST00000618538 NACADO15069 1562 aa7.1□□□□□ -1.27
SEC22B-202ENST00000618538 PRR29P0C7W0 189 aa7.09□□□□□ -1.27
SEC22B-202ENST00000618538 POTEIP0CG38 1075 aa7.09□□□□□ -1.27
SEC22B-202ENST00000618538 MROH2BQ7Z745 1585 aa7.09□□□□□ -1.27
SEC22B-202ENST00000618538 DCBLD2Q96PD2 775 aa7.09□□□□□ -1.27
SEC22B-202ENST00000618538 CD44P16070 742 aaKnown RBP7.08□□□□□ -1.28
SEC22B-202ENST00000618538 SLC4A1APQ9BWU0 796 aaKnown RBP7.07□□□□□ -1.28
SEC22B-202ENST00000618538 PPARGC1BQ86YN6 1023 aaKnown RBP7.05□□□□□ -1.28
SEC22B-202ENST00000618538 WIZO95785 1651 aa7.05□□□□□ -1.28
SEC22B-202ENST00000618538 ZNF579Q8NAF0 562 aaKnown RBP7.04□□□□□ -1.28
SEC22B-202ENST00000618538 CHADLQ6NUI6 762 aa7.03□□□□□ -1.28
SEC22B-202ENST00000618538 FARP1Q9Y4F1 1045 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms