RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 K7ELQ4 463 aaPredicted RBP-0.09□□□□□ -2.42
SOX2-OT-236ENST00000616401 NRG2O14511 850 aaPredicted RBP-0.09□□□□□ -2.42
SOX2-OT-236ENST00000616401 DSG3P32926 999 aa-0.09□□□□□ -2.42
SOX2-OT-236ENST00000616401 KRTAP10-12P60413 245 aa-0.09□□□□□ -2.42
SOX2-OT-236ENST00000616401 RASSF7Q02833 373 aa-0.09□□□□□ -2.42
SOX2-OT-236ENST00000616401 NFX1Q12986 1120 aaKnown RBP-0.09□□□□□ -2.42
SOX2-OT-236ENST00000616401 ATG9BQ674R7 924 aa-0.09□□□□□ -2.42
SOX2-OT-236ENST00000616401 BRIP1Q9BX63 1249 aa-0.09□□□□□ -2.42
SOX2-OT-236ENST00000616401 HCSTQ9UBK5 93 aa-0.09□□□□□ -2.42
SOX2-OT-236ENST00000616401 TENM3Q9P273 2699 aa-0.1□□□□□ -2.42
SOX2-OT-236ENST00000616401 SALL3Q9BXA9 1300 aa-0.1□□□□□ -2.42
SOX2-OT-236ENST00000616401 RNF225M0QZC1 329 aaPredicted RBP-0.1□□□□□ -2.43
SOX2-OT-236ENST00000616401 KRTAP10-2P60368 255 aa-0.1□□□□□ -2.43
SOX2-OT-236ENST00000616401 KRTAP10-8P60410 259 aa-0.1□□□□□ -2.43
SOX2-OT-236ENST00000616401 GPAT2Q6NUI2 795 aa-0.1□□□□□ -2.43
SOX2-OT-236ENST00000616401 WBP1LQ9NX94 342 aa-0.1□□□□□ -2.43
SOX2-OT-236ENST00000616401 KRTAP10-3P60369 221 aa-0.11□□□□□ -2.43
SOX2-OT-236ENST00000616401 LRCH2Q5VUJ6 765 aa-0.11□□□□□ -2.43
SOX2-OT-236ENST00000616401 MCTP1Q6DN14 999 aa-0.11□□□□□ -2.43
SOX2-OT-236ENST00000616401 DBX2Q6ZNG2 339 aa-0.11□□□□□ -2.43
SOX2-OT-236ENST00000616401 CRIPAKQ8N1N5 446 aa-0.11□□□□□ -2.43
SOX2-OT-236ENST00000616401 ZNF843Q8N446 348 aa-0.11□□□□□ -2.43
SOX2-OT-236ENST00000616401 HS3ST6Q96QI5 342 aa-0.11□□□□□ -2.43
SOX2-OT-236ENST00000616401 B8ZZF3 427 aa-0.12□□□□□ -2.43
SOX2-OT-236ENST00000616401 GFRA3O60609 400 aa-0.12□□□□□ -2.43
SOX2-OT-236ENST00000616401 ZNF764Q96H86 408 aaPredicted RBP-0.12□□□□□ -2.43
SOX2-OT-236ENST00000616401 CDCA7Q9BWT1 371 aaPredicted RBP-0.12□□□□□ -2.43
SOX2-OT-236ENST00000616401 DNAJC5BQ9UF47 199 aa-0.12□□□□□ -2.43
SOX2-OT-236ENST00000616401 COL17A1Q9UMD9 1497 aaPredicted RBP-0.12□□□□□ -2.43
SOX2-OT-236ENST00000616401 DSTQ03001 7570 aaKnown RBP-0.12□□□□□ -2.43
SOX2-OT-236ENST00000616401 MSTNO14793 375 aa-0.13□□□□□ -2.43
SOX2-OT-236ENST00000616401 SNPHO15079 494 aa-0.13□□□□□ -2.43
SOX2-OT-236ENST00000616401 C7P10643 843 aa-0.13□□□□□ -2.43
SOX2-OT-236ENST00000616401 EDAQ92838 391 aa-0.13□□□□□ -2.43
SOX2-OT-236ENST00000616401 NELL2Q99435 816 aa-0.13□□□□□ -2.43
SOX2-OT-236ENST00000616401 FBN3Q75N90 2809 aa-0.13□□□□□ -2.43
SOX2-OT-236ENST00000616401 NOTCH1P46531 2555 aa-0.13□□□□□ -2.43
SOX2-OT-236ENST00000616401 ITGB6P18564 788 aa-0.14□□□□□ -2.43
SOX2-OT-236ENST00000616401 BUD31P41223 144 aaPredicted RBP-0.14□□□□□ -2.43
SOX2-OT-236ENST00000616401 CD97P48960 835 aa-0.14□□□□□ -2.43
SOX2-OT-236ENST00000616401 KRTAP13-3Q3SY46 172 aa-0.14□□□□□ -2.43
SOX2-OT-236ENST00000616401 LCE2CQ5TA81 110 aa-0.14□□□□□ -2.43
SOX2-OT-236ENST00000616401 BHLHA9Q7RTU4 235 aa-0.14□□□□□ -2.43
SOX2-OT-236ENST00000616401 TTC13Q8NBP0 860 aa-0.14□□□□□ -2.43
SOX2-OT-236ENST00000616401 SLC39A7Q92504 469 aa-0.14□□□□□ -2.43
SOX2-OT-236ENST00000616401 ACSS3Q9H6R3 686 aa-0.14□□□□□ -2.43
SOX2-OT-236ENST00000616401 WASP42768 502 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 EMP3P54852 163 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 KRTAP10-5P60370 271 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 ARTNQ5T4W7 220 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 KANK3Q6NY19 840 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 SPOCD1Q6ZMY3 1216 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 NBPF11Q86T75 865 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 ZDHHC13Q8IUH4 622 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 SPATA3Q8NHX4 192 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 MARVELD3Q96A59 401 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 AKT1S1Q96B36 256 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 SPOCK3Q9BQ16 436 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 TMPRSS5Q9H3S3 457 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 ZFP64Q9NPA5 681 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 METRNQ9UJH8 293 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 DMRT2Q9Y5R5 561 aa-0.15□□□□□ -2.43
SOX2-OT-236ENST00000616401 SPRR5A0A1B0GTR4 108 aa-0.16□□□□□ -2.44
SOX2-OT-236ENST00000616401 POTECB2RU33 542 aa-0.16□□□□□ -2.44
SOX2-OT-236ENST00000616401 ATMINO43313 823 aaPredicted RBP-0.16□□□□□ -2.44
SOX2-OT-236ENST00000616401 EGFRP00533 1210 aa-0.16□□□□□ -2.44
SOX2-OT-236ENST00000616401 PROCP04070 461 aa-0.16□□□□□ -2.44
SOX2-OT-236ENST00000616401 ZMYM1Q5SVZ6 1142 aa-0.16□□□□□ -2.44
SOX2-OT-236ENST00000616401 LILRA6Q6PI73 481 aa-0.16□□□□□ -2.44
SOX2-OT-236ENST00000616401 SERINC5Q86VE9 423 aa-0.16□□□□□ -2.44
SOX2-OT-236ENST00000616401 CRELD1Q96HD1 420 aa-0.16□□□□□ -2.44
SOX2-OT-236ENST00000616401 UNKLQ9H9P5 680 aaKnown RBP-0.16□□□□□ -2.44
SOX2-OT-236ENST00000616401 RAPGEFL1Q9UHV5 662 aa-0.16□□□□□ -2.44
SOX2-OT-236ENST00000616401 FAM205CA6NFA0 338 aa-0.17□□□□□ -2.44
SOX2-OT-236ENST00000616401 PHGR1C9JFL3 82 aa-0.17□□□□□ -2.44
SOX2-OT-236ENST00000616401 TERTO14746 1132 aaKnown RBP-0.17□□□□□ -2.44
SOX2-OT-236ENST00000616401 IRS1P35568 1242 aa-0.17□□□□□ -2.44
SOX2-OT-236ENST00000616401 KRTAP19-4Q3LI73 84 aa-0.17□□□□□ -2.44
SOX2-OT-236ENST00000616401 BSPRYQ5W0U4 402 aa-0.17□□□□□ -2.44
SOX2-OT-236ENST00000616401 EGFL7Q9UHF1 273 aa-0.17□□□□□ -2.44
SOX2-OT-236ENST00000616401 TNFRSF18Q9Y5U5 241 aa-0.17□□□□□ -2.44
SOX2-OT-236ENST00000616401 SENP3-EIF4A1A0A087X0R7 540 aa-0.18□□□□□ -2.44
SOX2-OT-236ENST00000616401 ERVV-2B6SEH9 535 aa-0.18□□□□□ -2.44
SOX2-OT-236ENST00000616401 ITGB2P05107 769 aa-0.18□□□□□ -2.44
SOX2-OT-236ENST00000616401 ITGB7P26010 798 aa-0.18□□□□□ -2.44
SOX2-OT-236ENST00000616401 INHBCP55103 352 aa-0.18□□□□□ -2.44
SOX2-OT-236ENST00000616401 PELP1Q8IZL8 1130 aaKnown RBP-0.18□□□□□ -2.44
SOX2-OT-236ENST00000616401 OTOGLQ3ZCN5 2332 aa-0.18□□□□□ -2.44
SOX2-OT-236ENST00000616401 MUC12Q9UKN1 5478 aa-0.19□□□□□ -2.44
SOX2-OT-236ENST00000616401 BAG6P46379 1132 aa-0.19□□□□□ -2.44
SOX2-OT-236ENST00000616401 KRTAP10-11P60412 298 aa-0.19□□□□□ -2.44
SOX2-OT-236ENST00000616401 KRTAP21-1Q3LI58 79 aa-0.19□□□□□ -2.44
SOX2-OT-236ENST00000616401 PLA2G4EQ3MJ16 856 aa-0.19□□□□□ -2.44
SOX2-OT-236ENST00000616401 GALNT6Q8NCL4 622 aa-0.19□□□□□ -2.44
SOX2-OT-236ENST00000616401 SLAIN1Q8ND83 568 aa-0.19□□□□□ -2.44
SOX2-OT-236ENST00000616401 ANKS1AQ92625 1134 aa-0.19□□□□□ -2.44
SOX2-OT-236ENST00000616401 BORCS6Q96GS4 357 aa-0.19□□□□□ -2.44
SOX2-OT-236ENST00000616401 KRTAP1-5Q9BYS1 174 aa-0.19□□□□□ -2.44
SOX2-OT-236ENST00000616401 RNF114Q9Y508 228 aa-0.19□□□□□ -2.44
SOX2-OT-236ENST00000616401 TENM1Q9UKZ4 2725 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms