RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 POTEDQ86YR6 584 aa1.11□□□□□ -2.23
SOX2-OT-236ENST00000616401 PLSCR2Q9NRY7 297 aa0.79□□□□□ -2.28
SOX2-OT-236ENST00000616401 POTEHQ6S545 545 aa0.76□□□□□ -2.29
SOX2-OT-236ENST00000616401 XP32Q5T750 250 aa0.72□□□□□ -2.29
SOX2-OT-236ENST00000616401 KRTAP17-1Q9BYP8 105 aa0.65□□□□□ -2.31
SOX2-OT-236ENST00000616401 KRTAP9-8Q9BYQ0 159 aa0.61□□□□□ -2.31
SOX2-OT-236ENST00000616401 LOC100996750A0A140TA64 210 aa0.58□□□□□ -2.32
SOX2-OT-236ENST00000616401 KRTAP4-6Q9BYQ5 205 aa0.58□□□□□ -2.32
SOX2-OT-236ENST00000616401 KRTAP5-3Q6L8H2 238 aa0.57□□□□□ -2.32
SOX2-OT-236ENST00000616401 KRTAP4-5Q9BYR2 181 aa0.54□□□□□ -2.32
SOX2-OT-236ENST00000616401 PCDH10Q9P2E7 1040 aa0.54□□□□□ -2.32
SOX2-OT-236ENST00000616401 CACNB1Q02641 598 aaPredicted RBP0.46□□□□□ -2.34
SOX2-OT-236ENST00000616401 SP7Q8TDD2 431 aaPredicted RBP0.46□□□□□ -2.34
SOX2-OT-236ENST00000616401 KRTAP4-7Q9BYR0 210 aa0.45□□□□□ -2.34
SOX2-OT-236ENST00000616401 KRTAP4-8A0A0G2JLE6 195 aa0.44□□□□□ -2.34
SOX2-OT-236ENST00000616401 RGS19P49795 217 aa0.44□□□□□ -2.34
SOX2-OT-236ENST00000616401 KRTAP1-3Q8IUG1 177 aa0.44□□□□□ -2.34
SOX2-OT-236ENST00000616401 KRTAP4-8Q9BYQ9 185 aa0.43□□□□□ -2.34
SOX2-OT-236ENST00000616401 KRTAP4-2Q9BYR5 136 aa0.43□□□□□ -2.34
SOX2-OT-236ENST00000616401 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.42□□□□□ -2.34
SOX2-OT-236ENST00000616401 HMCN1Q96RW7 5635 aa0.42□□□□□ -2.34
SOX2-OT-236ENST00000616401 POTEMA6NI47 508 aa0.41□□□□□ -2.34
SOX2-OT-236ENST00000616401 KRTAP5-9P26371 169 aa0.41□□□□□ -2.34
SOX2-OT-236ENST00000616401 LHX8Q68G74 356 aa0.41□□□□□ -2.34
SOX2-OT-236ENST00000616401 KRTAP9-2Q9BYQ4 174 aa0.41□□□□□ -2.34
SOX2-OT-236ENST00000616401 KRTAP9-6A0A140TA67 174 aa0.4□□□□□ -2.35
SOX2-OT-236ENST00000616401 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.39□□□□□ -2.35
SOX2-OT-236ENST00000616401 BTBD11A6QL63 1104 aa0.38□□□□□ -2.35
SOX2-OT-236ENST00000616401 POTEGQ6S5H5 508 aa0.38□□□□□ -2.35
SOX2-OT-236ENST00000616401 LSRQ86X29 649 aaPredicted RBP0.38□□□□□ -2.35
SOX2-OT-236ENST00000616401 KRTAP9-9Q9BYP9 154 aa0.38□□□□□ -2.35
SOX2-OT-236ENST00000616401 KRTAP9-4Q9BYQ2 154 aa0.38□□□□□ -2.35
SOX2-OT-236ENST00000616401 KRTAP4-9Q9BYQ8 210 aa0.38□□□□□ -2.35
SOX2-OT-236ENST00000616401 LCE3BQ5TA77 95 aa0.36□□□□□ -2.35
SOX2-OT-236ENST00000616401 LCE1DQ5T752 114 aa0.35□□□□□ -2.35
SOX2-OT-236ENST00000616401 KRTAP5-8O75690 187 aa0.34□□□□□ -2.36
SOX2-OT-236ENST00000616401 KRTAP5-4Q6L8H1 288 aa0.34□□□□□ -2.36
SOX2-OT-236ENST00000616401 KRTAP5-2Q701N4 177 aa0.34□□□□□ -2.36
SOX2-OT-236ENST00000616401 FOXD1Q16676 465 aa0.32□□□□□ -2.36
SOX2-OT-236ENST00000616401 PSMG3-AS1Q96PY0 264 aa0.32□□□□□ -2.36
SOX2-OT-236ENST00000616401 KRTAP4-11Q9BYQ6 195 aa0.32□□□□□ -2.36
SOX2-OT-236ENST00000616401 KRTAP5-5Q701N2 237 aaPredicted RBP0.31□□□□□ -2.36
SOX2-OT-236ENST00000616401 KRTAP4-12Q9BQ66 201 aa0.31□□□□□ -2.36
SOX2-OT-236ENST00000616401 KRTAP1-1Q07627 177 aa0.3□□□□□ -2.36
SOX2-OT-236ENST00000616401 SUZ12Q15022 739 aaKnown RBP0.3□□□□□ -2.36
SOX2-OT-236ENST00000616401 KRTAP9-3Q9BYQ3 159 aa0.3□□□□□ -2.36
SOX2-OT-236ENST00000616401 KRTAP4-3Q9BYR4 195 aa0.3□□□□□ -2.36
SOX2-OT-236ENST00000616401 MMRN1Q13201 1228 aa0.29□□□□□ -2.36
SOX2-OT-236ENST00000616401 KRTAP4-4Q9BYR3 166 aa0.29□□□□□ -2.36
SOX2-OT-236ENST00000616401 KRTAP5-1Q6L8H4 278 aa0.28□□□□□ -2.36
SOX2-OT-236ENST00000616401 CDAN1Q8IWY9 1227 aa0.26□□□□□ -2.37
SOX2-OT-236ENST00000616401 ANO8Q9HCE9 1232 aaPredicted RBP0.26□□□□□ -2.37
SOX2-OT-236ENST00000616401 MUC5BQ9HC84 5762 aaPredicted RBP0.26□□□□□ -2.37
SOX2-OT-236ENST00000616401 WDR26Q9H7D7 661 aa0.25□□□□□ -2.37
SOX2-OT-236ENST00000616401 KRTAP9-7A8MTY7 169 aa0.24□□□□□ -2.37
SOX2-OT-236ENST00000616401 LAMC2Q13753 1193 aa0.24□□□□□ -2.37
SOX2-OT-236ENST00000616401 SPNS2Q8IVW8 549 aa0.23□□□□□ -2.37
SOX2-OT-236ENST00000616401 ARID1BQ8NFD5 2236 aaPredicted RBP0.23□□□□□ -2.37
SOX2-OT-236ENST00000616401 OBSCNQ5VST9 7968 aa0.23□□□□□ -2.37
SOX2-OT-236ENST00000616401 MSH5O43196 834 aa0.22□□□□□ -2.37
SOX2-OT-236ENST00000616401 KRTAP5-11Q6L8G4 156 aa0.21□□□□□ -2.38
SOX2-OT-236ENST00000616401 KRTAP19-1Q8IUB9 90 aa0.2□□□□□ -2.38
SOX2-OT-236ENST00000616401 IGSF5Q9NSI5 407 aa0.2□□□□□ -2.38
SOX2-OT-236ENST00000616401 LCE2DQ5TA82 110 aaPredicted RBP0.19□□□□□ -2.38
SOX2-OT-236ENST00000616401 POTEB3A0JP26 581 aa0.17□□□□□ -2.38
SOX2-OT-236ENST00000616401 POTEBQ6S5H4 581 aa0.17□□□□□ -2.38
SOX2-OT-236ENST00000616401 OTUD5Q96G74 571 aa0.17□□□□□ -2.38
SOX2-OT-236ENST00000616401 STK17AQ9UEE5 414 aa0.17□□□□□ -2.38
SOX2-OT-236ENST00000616401 GOLGA2P5Q9HBQ8 144 aa0.16□□□□□ -2.38
SOX2-OT-236ENST00000616401 LCE5AQ5TCM9 118 aa0.15□□□□□ -2.39
SOX2-OT-236ENST00000616401 KRTAP5-7Q6L8G8 165 aa0.15□□□□□ -2.39
SOX2-OT-236ENST00000616401 AHNAKQ09666 5890 aaKnown RBP0.15□□□□□ -2.39
SOX2-OT-236ENST00000616401 CHRDL2Q6WN34 429 aa0.14□□□□□ -2.39
SOX2-OT-236ENST00000616401 DNAJC5GQ8N7S2 189 aa0.14□□□□□ -2.39
SOX2-OT-236ENST00000616401 HAX1O00165 279 aa0.13□□□□□ -2.39
SOX2-OT-236ENST00000616401 LORP23490 312 aaPredicted RBP0.13□□□□□ -2.39
SOX2-OT-236ENST00000616401 KCTD12Q96CX2 325 aaKnown RBP0.13□□□□□ -2.39
SOX2-OT-236ENST00000616401 AVENQ9NQS1 362 aaPredicted RBP0.13□□□□□ -2.39
SOX2-OT-236ENST00000616401 SERINC4A6NH21 518 aa0.12□□□□□ -2.39
SOX2-OT-236ENST00000616401 KRTAP9-6A8MVA2 160 aa0.12□□□□□ -2.39
SOX2-OT-236ENST00000616401 RBAK-RBAKDNI3L0D1 243 aa0.12□□□□□ -2.39
SOX2-OT-236ENST00000616401 RGS20O76081 388 aa0.12□□□□□ -2.39
SOX2-OT-236ENST00000616401 KRTAP10-9P60411 292 aa0.12□□□□□ -2.39
SOX2-OT-236ENST00000616401 COL9A3Q14050 684 aaPredicted RBP0.12□□□□□ -2.39
SOX2-OT-236ENST00000616401 IRX2Q9BZI1 471 aaPredicted RBP0.12□□□□□ -2.39
SOX2-OT-236ENST00000616401 RNF39Q9H2S5 420 aa0.12□□□□□ -2.39
SOX2-OT-236ENST00000616401 NOTCH2Q04721 2471 aa0.12□□□□□ -2.39
SOX2-OT-236ENST00000616401 GPR98Q8WXG9 6306 aa0.11□□□□□ -2.39
SOX2-OT-236ENST00000616401 PSPNO60542 156 aa0.11□□□□□ -2.39
SOX2-OT-236ENST00000616401 COBLO75128 1261 aa0.11□□□□□ -2.39
SOX2-OT-236ENST00000616401 KRTAP10-7P60409 375 aaPredicted RBP0.11□□□□□ -2.39
SOX2-OT-236ENST00000616401 C1QBPQ07021 282 aaKnown RBP0.11□□□□□ -2.39
SOX2-OT-236ENST00000616401 CCER1Q8TC90 406 aaPredicted RBP0.11□□□□□ -2.39
SOX2-OT-236ENST00000616401 MUC5ACP98088 5654 aa0.11□□□□□ -2.39
SOX2-OT-236ENST00000616401 GSC2O15499 205 aa0.1□□□□□ -2.39
SOX2-OT-236ENST00000616401 ONECUT2O95948 504 aa0.1□□□□□ -2.39
SOX2-OT-236ENST00000616401 KRTAP5-10Q6L8G5 202 aa0.1□□□□□ -2.39
SOX2-OT-236ENST00000616401 AHNAK2Q8IVF2 5795 aa0.1□□□□□ -2.39
SOX2-OT-236ENST00000616401 KRTAP4-16G5E9R7 235 aaPredicted RBP0.09□□□□□ -2.4
SOX2-OT-236ENST00000616401 ZNF775Q96BV0 537 aaPredicted RBP0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms