RNA–Protein interactions for RNA: ENST00000615043.1

PCDH15-228, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-228ENST00000615043 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
PCDH15-228ENST00000615043 IFT140Q96RY7 1462 aa15.75■□□□□ 0.11
PCDH15-228ENST00000615043 KCNV2Q8TDN2 545 aa15.72■□□□□ 0.11
PCDH15-228ENST00000615043 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
PCDH15-228ENST00000615043 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
PCDH15-228ENST00000615043 PAK3O75914 559 aaPredicted RBP15.71■□□□□ 0.11
PCDH15-228ENST00000615043 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
PCDH15-228ENST00000615043 FAM9AQ8IZU1 332 aaPredicted RBP15.7■□□□□ 0.1
PCDH15-228ENST00000615043 EEA1Q15075 1411 aa15.69■□□□□ 0.1
PCDH15-228ENST00000615043 IFNL1Q8IU54 200 aa15.68■□□□□ 0.1
PCDH15-228ENST00000615043 ABCA5Q8WWZ7 1642 aa15.68■□□□□ 0.1
PCDH15-228ENST00000615043 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
PCDH15-228ENST00000615043 ZNF608Q9ULD9 1512 aaPredicted RBP15.65■□□□□ 0.1
PCDH15-228ENST00000615043 MAP3K13O43283 966 aa15.64■□□□□ 0.09
PCDH15-228ENST00000615043 EIF4G3O43432 1585 aaKnown RBP15.64■□□□□ 0.09
PCDH15-228ENST00000615043 PPP1R37O75864 691 aa15.63■□□□□ 0.09
PCDH15-228ENST00000615043 EFCAB3Q8N7B9 438 aa15.63■□□□□ 0.09
PCDH15-228ENST00000615043 GAPVD1Q14C86 1478 aa15.63■□□□□ 0.09
PCDH15-228ENST00000615043 NLRP6P59044 892 aa15.62■□□□□ 0.09
PCDH15-228ENST00000615043 KIF12Q96FN5 646 aa15.62■□□□□ 0.09
PCDH15-228ENST00000615043 CABP2Q9NPB3 220 aa15.62■□□□□ 0.09
PCDH15-228ENST00000615043 PBRM1Q86U86 1689 aa15.61■□□□□ 0.09
PCDH15-228ENST00000615043 AQRO60306 1485 aaKnown RBP eCLIP15.61■□□□□ 0.09
PCDH15-228ENST00000615043 SOX12O15370 315 aa15.6■□□□□ 0.09
PCDH15-228ENST00000615043 FBXO22Q8NEZ5 403 aa15.6■□□□□ 0.09
PCDH15-228ENST00000615043 PHF8Q9UPP1 1060 aa15.58■□□□□ 0.08
PCDH15-228ENST00000615043 LMOD2Q6P5Q4 547 aa15.57■□□□□ 0.08
PCDH15-228ENST00000615043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDH15-228ENST00000615043 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
PCDH15-228ENST00000615043 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
PCDH15-228ENST00000615043 IGF1RP08069 1367 aa15.55■□□□□ 0.08
PCDH15-228ENST00000615043 CUL7Q14999 1698 aa15.54■□□□□ 0.08
PCDH15-228ENST00000615043 KIF21BO75037 1637 aa15.54■□□□□ 0.08
PCDH15-228ENST00000615043 PIP4P2Q8N4L2 257 aa15.53■□□□□ 0.08
PCDH15-228ENST00000615043 ARHGEF1Q92888 912 aaKnown RBP15.52■□□□□ 0.08
PCDH15-228ENST00000615043 ADAMTS12P58397 1594 aa15.51■□□□□ 0.07
PCDH15-228ENST00000615043 CHRDL2Q6WN34 429 aa15.51■□□□□ 0.07
PCDH15-228ENST00000615043 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
PCDH15-228ENST00000615043 E2F4Q16254 413 aa15.5■□□□□ 0.07
PCDH15-228ENST00000615043 SNAPC4Q5SXM2 1469 aa15.5■□□□□ 0.07
PCDH15-228ENST00000615043 TULP1O00294 542 aaPredicted RBP15.49■□□□□ 0.07
PCDH15-228ENST00000615043 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
PCDH15-228ENST00000615043 GOLGA3Q08378 1498 aa15.48■□□□□ 0.07
PCDH15-228ENST00000615043 ZRANB1Q9UGI0 708 aa15.48■□□□□ 0.07
PCDH15-228ENST00000615043 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
PCDH15-228ENST00000615043 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
PCDH15-228ENST00000615043 FHAD1B1AJZ9 1412 aa15.45■□□□□ 0.06
PCDH15-228ENST00000615043 LOC105371045A0A1W2PR82 267 aa15.45■□□□□ 0.06
PCDH15-228ENST00000615043 PHF12Q96QT6 1004 aa15.42■□□□□ 0.06
PCDH15-228ENST00000615043 CD44P16070 742 aaKnown RBP15.41■□□□□ 0.06
PCDH15-228ENST00000615043 GTF3C3Q9Y5Q9 886 aa15.41■□□□□ 0.06
PCDH15-228ENST00000615043 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
PCDH15-228ENST00000615043 TMEM132AQ24JP5 1023 aa15.4■□□□□ 0.06
PCDH15-228ENST00000615043 NCKAP5LQ9HCH0 1330 aa15.4■□□□□ 0.06
PCDH15-228ENST00000615043 MS4A4AQ96JQ5 239 aa15.39■□□□□ 0.05
PCDH15-228ENST00000615043 UBTFP17480 764 aaKnown RBP15.38■□□□□ 0.05
PCDH15-228ENST00000615043 PDE4AP27815 886 aa15.38■□□□□ 0.05
PCDH15-228ENST00000615043 LARP6Q9BRS8 491 aaKnown RBP15.38■□□□□ 0.05
PCDH15-228ENST00000615043 GRIN2AQ12879 1464 aa15.37■□□□□ 0.05
PCDH15-228ENST00000615043 CHD1O14646 1710 aa15.37■□□□□ 0.05
PCDH15-228ENST00000615043 SEMA3EO15041 775 aa15.36■□□□□ 0.05
PCDH15-228ENST00000615043 GOLGA2Q08379 1002 aa15.36■□□□□ 0.05
PCDH15-228ENST00000615043 TESPA1A2RU30 521 aaPredicted RBP15.35■□□□□ 0.05
PCDH15-228ENST00000615043 CHMP7Q8WUX9 453 aaPredicted RBP15.35■□□□□ 0.05
PCDH15-228ENST00000615043 TMEM106CQ9BVX2 250 aa15.34■□□□□ 0.05
PCDH15-228ENST00000615043 CTTNBP2Q8WZ74 1663 aa15.34■□□□□ 0.05
PCDH15-228ENST00000615043 TNIKQ9UKE5 1360 aa15.34■□□□□ 0.05
PCDH15-228ENST00000615043 TIMELESSQ9UNS1 1208 aa15.33■□□□□ 0.04
PCDH15-228ENST00000615043 MFSD10Q14728 455 aa15.32■□□□□ 0.04
PCDH15-228ENST00000615043 ZC3H15Q8WU90 426 aaKnown RBP15.32■□□□□ 0.04
PCDH15-228ENST00000615043 CRISPLD2Q9H0B8 497 aa15.31■□□□□ 0.04
PCDH15-228ENST00000615043 CEP170Q5SW79 1584 aa15.29■□□□□ 0.04
PCDH15-228ENST00000615043 DDX27Q96GQ7 796 aaKnown RBP15.28■□□□□ 0.04
PCDH15-228ENST00000615043 MKRN3Q13064 507 aaKnown RBP15.27■□□□□ 0.04
PCDH15-228ENST00000615043 TRPC6Q9Y210 931 aa15.27■□□□□ 0.04
PCDH15-228ENST00000615043 NUP160Q12769 1436 aa15.26■□□□□ 0.03
PCDH15-228ENST00000615043 MS4A3Q96HJ5 214 aa15.26■□□□□ 0.03
PCDH15-228ENST00000615043 CEP162Q5TB80 1403 aa15.26■□□□□ 0.03
PCDH15-228ENST00000615043 IQGAP2Q13576 1575 aa15.25■□□□□ 0.03
PCDH15-228ENST00000615043 SMYD5Q6GMV2 418 aa15.23■□□□□ 0.03
PCDH15-228ENST00000615043 ARIH1Q9Y4X5 557 aaPredicted RBP15.23■□□□□ 0.03
PCDH15-228ENST00000615043 RANGAP1P46060 587 aaPredicted RBP15.22■□□□□ 0.03
PCDH15-228ENST00000615043 BRPF1P55201 1214 aaPredicted RBP15.22■□□□□ 0.03
PCDH15-228ENST00000615043 KIAA0586Q9BVV6 1533 aa15.22■□□□□ 0.03
PCDH15-228ENST00000615043 CLIP1P30622 1438 aa15.2■□□□□ 0.02
PCDH15-228ENST00000615043 CAMK2BQ13554 666 aa15.2■□□□□ 0.02
PCDH15-228ENST00000615043 ERICH6Q7L0X2 663 aa15.18■□□□□ 0.02
PCDH15-228ENST00000615043 SLC24A3Q9HC58 644 aa15.18■□□□□ 0.02
PCDH15-228ENST00000615043 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
PCDH15-228ENST00000615043 EFCAB5A4FU69 1503 aa15.17■□□□□ 0.02
PCDH15-228ENST00000615043 TIE1P35590 1138 aa15.15■□□□□ 0.02
PCDH15-228ENST00000615043 UGGT2Q9NYU1 1516 aa15.15■□□□□ 0.02
PCDH15-228ENST00000615043 SAMD9Q5K651 1589 aa15.15■□□□□ 0.02
PCDH15-228ENST00000615043 ARHGAP35Q9NRY4 1499 aa15.14■□□□□ 0.01
PCDH15-228ENST00000615043 C19orf67A6NJJ6 358 aa15.14■□□□□ 0.01
PCDH15-228ENST00000615043 NEUROD2Q15784 382 aa15.13■□□□□ 0.01
PCDH15-228ENST00000615043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.13■□□□□ 0.01
PCDH15-228ENST00000615043 TTLL13PA6NNM8 815 aa15.12■□□□□ 0.01
PCDH15-228ENST00000615043 ZMYND10O75800 440 aa15.12■□□□□ 0.01
PCDH15-228ENST00000615043 SHROOM2Q13796 1616 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms